Cla006577 (gene) Watermelon (97103) v1

Overview
NameCla006577
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionFasciclin domain-containing protein (AHRD V1 ***- B9HHL5_POPTR); contains Interpro domain(s) IPR000782 FAS1 domain
LocationChr11 : 1630735 .. 1631331 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGACCTTCGTTTTAAAGAGCCCAATTGCCTTTGTTTTTATGATTCTGTCTCTTTGCTGCATACTTATTGTACTCATCACAACACTAAGACTTCCAGAGCTAACTGTTGGAGTTAAGGCTGTAGCCAGTGATAAGGTTTCAGTGATCAGAAAGATACCCAAAGATGATAAGTTGGGCAAGTTTGGAGAGATGATGATCAAAATGTTGCCTAAGGATCTTGCTTTTACTCTGTTTATTCCTTCGGAGAATGCTTTTGAGCGCGAATTGAATTTACGAGTGAACGAAAGTTTCACAAGTACTGAGAAGTTGGACAACACATATGCTGTGATTTCGAGAATATTAGGATTCTCTGCGGTTCCTCGAACTATTTTTTCGACGTTAGTAGATTACGGGAATGAAATTTCATATGATGCTGTTTCTGGATTCACATTGCACATTTCCAAGGACAGAGATGGGATGCTGATTGTTAACGGGGTGAGGTCTGAAATGGTGGATATAAAGAAAAAGGATGTTCTTGTGCATATAATGGATGGTGTTATAATGGATGCTGCATTTGAGCAATCAGTAAAACCTGATGACAGTGAAGATTGA

mRNA sequence

ATGAAGAGGACCTTCGTTTTAAAGAGCCCAATTGCCTTTGTTTTTATGATTCTGTCTCTTTGCTGCATACTTATTGTACTCATCACAACACTAAGACTTCCAGAGCTAACTGTTGGAGTTAAGGCTGTAGCCAGTGATAAGGTTTCAGTGATCAGAAAGATACCCAAAGATGATAAGTTGGGCAAGTTTGGAGAGATGATGATCAAAATGTTGCCTAAGGATCTTGCTTTTACTCTGTTTATTCCTTCGGAGAATGCTTTTGAGCGCGAATTGAATTTACGAGTGAACGAAAGTTTCACAAGTACTGAGAAGTTGGACAACACATATGCTGTGATTTCGAGAATATTAGGATTCTCTGCGGTTCCTCGAACTATTTTTTCGACGTTAGTAGATTACGGGAATGAAATTTCATATGATGCTGTTTCTGGATTCACATTGCACATTTCCAAGGACAGAGATGGGATGCTGATTGTTAACGGGGTGAGGTCTGAAATGGTGGATATAAAGAAAAAGGATGTTCTTGTGCATATAATGGATGGTGTTATAATGGATGCTGCATTTGAGCAATCAGTAAAACCTGATGACAGTGAAGATTGA

Coding sequence (CDS)

ATGAAGAGGACCTTCGTTTTAAAGAGCCCAATTGCCTTTGTTTTTATGATTCTGTCTCTTTGCTGCATACTTATTGTACTCATCACAACACTAAGACTTCCAGAGCTAACTGTTGGAGTTAAGGCTGTAGCCAGTGATAAGGTTTCAGTGATCAGAAAGATACCCAAAGATGATAAGTTGGGCAAGTTTGGAGAGATGATGATCAAAATGTTGCCTAAGGATCTTGCTTTTACTCTGTTTATTCCTTCGGAGAATGCTTTTGAGCGCGAATTGAATTTACGAGTGAACGAAAGTTTCACAAGTACTGAGAAGTTGGACAACACATATGCTGTGATTTCGAGAATATTAGGATTCTCTGCGGTTCCTCGAACTATTTTTTCGACGTTAGTAGATTACGGGAATGAAATTTCATATGATGCTGTTTCTGGATTCACATTGCACATTTCCAAGGACAGAGATGGGATGCTGATTGTTAACGGGGTGAGGTCTGAAATGGTGGATATAAAGAAAAAGGATGTTCTTGTGCATATAATGGATGGTGTTATAATGGATGCTGCATTTGAGCAATCAGTAAAACCTGATGACAGTGAAGATTGA

Protein sequence

MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKLGKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSAVPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
Homology
[Close]
BLAST of Cla006577 vs. TrEMBL
Match: A0A0A0K8H5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G010005 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 8.0e-91
Identity = 171/198 (86.36%), Postives = 192/198 (96.97%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           MKR+F+LK+PIAFVFMILSLCC+LIVLITTLRLPELTVGVKA A DKVS+IRK+ KDD+L
Sbjct: 1   MKRSFILKNPIAFVFMILSLCCVLIVLITTLRLPELTVGVKAGARDKVSLIRKVLKDDEL 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           GKFGEMMI+MLP+DLAFT+FIPSE AFEREL+LRVNESFTSTEK+D+TYAVISRILGFSA
Sbjct: 61  GKFGEMMIEMLPEDLAFTVFIPSEKAFERELSLRVNESFTSTEKMDDTYAVISRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VPRTI+STLVDYG+EI YDAVSGFTL+ISKDR+G L+VNGVRSEMVD+KKKDVLVHIMDG
Sbjct: 121 VPRTIYSTLVDYGSEIIYDAVSGFTLNISKDRNGRLVVNGVRSEMVDLKKKDVLVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDA+FEQSVKPDD+ED
Sbjct: 181 VIMDASFEQSVKPDDNED 198

[Close]
BLAST of Cla006577 vs. TrEMBL
Match: B9SLJ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0591780 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-59
Identity = 113/191 (59.16%), Postives = 156/191 (81.68%), Query Frame = 1 

Query: 8   KSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKLGKFGEMM 67
           K+PIAFV +++S+CC L+++I+ LRLPE+TVG K +   +    RKI KD+ +GKFG++M
Sbjct: 8   KNPIAFVGVVVSVCCFLVIMISVLRLPEVTVGNKVIRPYRTFKSRKISKDEGIGKFGDLM 67

Query: 68  IKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSAVPRTIFS 127
           I+MLP+DLAFT+F+PSE AFER+L LR N+S  + EK ++TYAV+SRILGFSA+PRT+ S
Sbjct: 68  IEMLPEDLAFTVFVPSEKAFERDLRLRANDSLLA-EKRNDTYAVVSRILGFSAIPRTLLS 127

Query: 128 TLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDGVIMDAAF 187
             V    E+ YD++SGF L++SKD DGMLIVN +RSE VD+++++V+VH+MDGVIMDA F
Sbjct: 128 AAVYSNKELFYDSLSGFPLYVSKDADGMLIVNRIRSERVDVRRREVIVHVMDGVIMDAEF 187

Query: 188 EQSVKPDDSED 199
           EQSV+PD +ED
Sbjct: 188 EQSVQPDYTED 197

[Close]
BLAST of Cla006577 vs. TrEMBL
Match: U5G276_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s19970g PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.8e-57
Identity = 107/198 (54.04%), Postives = 161/198 (81.31%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           M+R   +K+ IAFV +++S+CC+L+++++ L+LPE+++  +    ++   IRK+ KD+++
Sbjct: 1   MRRGCFVKNLIAFVGVVISVCCLLVIMVSVLQLPEVSLRNEVTGPNRTIRIRKVSKDEEI 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           G+FGEMMI+MLP+DLAFT+F+PSE AF+R+L LR+N+S  + EK ++TYAV+SRILGFSA
Sbjct: 61  GRFGEMMIEMLPEDLAFTVFVPSEKAFQRDLRLRLNDSLVA-EKRNDTYAVVSRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VP+T+ S  V    E+ YD++SGFTL+ISKD DGML+VN +RSE VD+++  ++VHIMDG
Sbjct: 121 VPQTLSSATVSSSKEVFYDSLSGFTLYISKDLDGMLVVNRIRSEKVDLRRGQIVVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDA FEQ+V+PD +E+
Sbjct: 181 VIMDAEFEQAVQPDYTEE 197

[Close]
BLAST of Cla006577 vs. TrEMBL
Match: V7BAA1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G225800g PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-53
Identity = 108/199 (54.27%), Postives = 151/199 (75.88%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKI-PKDDK 60
           M+R  VLK  IA+V M++ +CC  IV +T L+LP+      A+    ++  RK+ PKD  
Sbjct: 1   MRRRQVLKHSIAYVSMLVCVCCFFIVTVTVLKLPDAPTKESAMGFYPITRSRKVSPKDAN 60

Query: 61  LGKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFS 120
           LGKFGEMMI MLP+DLAFT+F+PSE AF+R+L L VN++  S ++ ++TYA+++RILGFS
Sbjct: 61  LGKFGEMMIDMLPQDLAFTVFVPSEEAFKRDLRLSVNDALKS-DRFNDTYAILTRILGFS 120

Query: 121 AVPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMD 180
           AVPR + S  V  G  ++YD++SGF+L+ISKD DGML+VN +RSE+VD++KK+++VH+MD
Sbjct: 121 AVPRALSSANVKLGELVNYDSLSGFSLYISKDIDGMLVVNRIRSEIVDVRKKEIVVHLMD 180

Query: 181 GVIMDAAFEQSVKPDDSED 199
           GVIMDA FEQSV  D+  D
Sbjct: 181 GVIMDAEFEQSVLSDNDTD 198

[Close]
BLAST of Cla006577 vs. TrEMBL
Match: A0A059A5Q1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02662 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.9e-53
Identity = 107/194 (55.15%), Postives = 148/194 (76.29%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           M+R    K+ IAFV  ++SLCC L+++++TLRLPE++ G  AV S + +   K  ++ +L
Sbjct: 1   MRRGRFAKNSIAFVCTVVSLCCFLVLILSTLRLPEVSSGNDAVGSHRTTKAGKFSENRRL 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           G FGEMM++MLP+DLAFT+F+PSE AF R+L L   ESF + E ++NTYAV+SR+LGFSA
Sbjct: 61  GTFGEMMVEMLPQDLAFTVFVPSEKAFGRDLQLNATESF-AAENINNTYAVVSRVLGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VPR + S  V  G EISYD++SG+ L+ISK  +G +IVNGV SE +D +K +++VHIMDG
Sbjct: 121 VPRVLTSETVPVGKEISYDSLSGYALYISKAVNGRIIVNGVESESLDTRKGEIVVHIMDG 180

Query: 181 VIMDAAFEQSVKPD 195
           VIMDA F+QSV+PD
Sbjct: 181 VIMDADFKQSVQPD 193

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|449441324|ref|XP_004138432.1| (PREDICTED: uncharacterized protein LOC101206202 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90
Identity = 171/198 (86.36%), Postives = 192/198 (96.97%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           MKR+F+LK+PIAFVFMILSLCC+LIVLITTLRLPELTVGVKA A DKVS+IRK+ KDD+L
Sbjct: 1   MKRSFILKNPIAFVFMILSLCCVLIVLITTLRLPELTVGVKAGARDKVSLIRKVLKDDEL 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           GKFGEMMI+MLP+DLAFT+FIPSE AFEREL+LRVNESFTSTEK+D+TYAVISRILGFSA
Sbjct: 61  GKFGEMMIEMLPEDLAFTVFIPSEKAFERELSLRVNESFTSTEKMDDTYAVISRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VPRTI+STLVDYG+EI YDAVSGFTL+ISKDR+G L+VNGVRSEMVD+KKKDVLVHIMDG
Sbjct: 121 VPRTIYSTLVDYGSEIIYDAVSGFTLNISKDRNGRLVVNGVRSEMVDLKKKDVLVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDA+FEQSVKPDD+ED
Sbjct: 181 VIMDASFEQSVKPDDNED 198

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|659081648|ref|XP_008441441.1| (PREDICTED: uncharacterized protein LOC103485559 [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 4.4e-90
Identity = 171/198 (86.36%), Postives = 189/198 (95.45%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           MKR+F+LK+PIAFVFMILSLCC+LIVLITTLRLPELTVG K  A DKVS+IRK+ KD KL
Sbjct: 1   MKRSFILKNPIAFVFMILSLCCVLIVLITTLRLPELTVGFKTGARDKVSLIRKVLKDGKL 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           GKFGEMMI+MLP+DLAFT+FIPSE AFEREL+LRVNESFTSTEK+D+TYAVISRILGFSA
Sbjct: 61  GKFGEMMIEMLPEDLAFTVFIPSEKAFERELSLRVNESFTSTEKMDDTYAVISRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VPRTI+STLVDYG+EISYDAVSGFTL+ISKDRDG L+VNGVRSEMVD+KKK VLVHIMDG
Sbjct: 121 VPRTIYSTLVDYGSEISYDAVSGFTLNISKDRDGRLVVNGVRSEMVDLKKKGVLVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDAAFEQSVKPDD+ED
Sbjct: 181 VIMDAAFEQSVKPDDNED 198

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|802546967|ref|XP_012087833.1| (PREDICTED: uncharacterized protein LOC105646572 isoform X1 [Jatropha curcas])

HSP 1 Score: 243.8 bits (621), Expect = 2.5e-61
Identity = 114/198 (57.58%), Postives = 165/198 (83.33%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           M+R ++L   IAFV M++S+CC+++++I+ LRLPE++VG K + S +    RK+ KD+ +
Sbjct: 1   MRRGYLLNYSIAFVGMVVSVCCLIVIMISVLRLPEISVGNKLMGSYRTIKSRKVSKDEGI 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           G+FGEMMI+MLP+DLAFT+FIPSE AFER+L LRVN+S  + +K ++TYA++SRILGFSA
Sbjct: 61  GRFGEMMIEMLPEDLAFTVFIPSERAFERDLKLRVNDSLVA-DKRNDTYAIVSRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           +PRT+ + +V    ++SYD++SGFTL+I+KD DGMLIVN +RSE VDI++++++VHIMDG
Sbjct: 121 IPRTLSAAMVSSNKDVSYDSISGFTLYITKDVDGMLIVNRIRSERVDIRRREIIVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDA FEQSV+PD +E+
Sbjct: 181 VIMDAEFEQSVQPDYAEE 197

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|255571837|ref|XP_002526861.1| (PREDICTED: uncharacterized protein LOC8270435 [Ricinus communis])

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59
Identity = 113/191 (59.16%), Postives = 156/191 (81.68%), Query Frame = 1 

Query: 8   KSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKLGKFGEMM 67
           K+PIAFV +++S+CC L+++I+ LRLPE+TVG K +   +    RKI KD+ +GKFG++M
Sbjct: 8   KNPIAFVGVVVSVCCFLVIMISVLRLPEVTVGNKVIRPYRTFKSRKISKDEGIGKFGDLM 67

Query: 68  IKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSAVPRTIFS 127
           I+MLP+DLAFT+F+PSE AFER+L LR N+S  + EK ++TYAV+SRILGFSA+PRT+ S
Sbjct: 68  IEMLPEDLAFTVFVPSEKAFERDLRLRANDSLLA-EKRNDTYAVVSRILGFSAIPRTLLS 127

Query: 128 TLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDGVIMDAAF 187
             V    E+ YD++SGF L++SKD DGMLIVN +RSE VD+++++V+VH+MDGVIMDA F
Sbjct: 128 AAVYSNKELFYDSLSGFPLYVSKDADGMLIVNRIRSERVDVRRREVIVHVMDGVIMDAEF 187

Query: 188 EQSVKPDDSED 199
           EQSV+PD +ED
Sbjct: 188 EQSVQPDYTED 197

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|802546969|ref|XP_012087840.1| (PREDICTED: uncharacterized protein LOC105646572 isoform X2 [Jatropha curcas])

HSP 1 Score: 232.3 bits (591), Expect = 7.5e-58
Identity = 107/183 (58.47%), Postives = 155/183 (84.70%), Query Frame = 1 

Query: 16  MILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKLGKFGEMMIKMLPKDL 75
           M++S+CC+++++I+ LRLPE++VG K + S +    RK+ KD+ +G+FGEMMI+MLP+DL
Sbjct: 1   MVVSVCCLIVIMISVLRLPEISVGNKLMGSYRTIKSRKVSKDEGIGRFGEMMIEMLPEDL 60

Query: 76  AFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSAVPRTIFSTLVDYGNE 135
           AFT+FIPSE AFER+L LRVN+S  + +K ++TYA++SRILGFSA+PRT+ + +V    +
Sbjct: 61  AFTVFIPSERAFERDLKLRVNDSLVA-DKRNDTYAIVSRILGFSAIPRTLSAAMVSSNKD 120

Query: 136 ISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDD 195
           +SYD++SGFTL+I+KD DGMLIVN +RSE VDI++++++VHIMDGVIMDA FEQSV+PD 
Sbjct: 121 VSYDSISGFTLYITKDVDGMLIVNRIRSERVDIRRREIIVHIMDGVIMDAEFEQSVQPDY 180

Query: 196 SED 199
           +E+
Sbjct: 181 AEE 182

The following BLAST results are available for this feature:
BLAST of Cla006577 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8H5_CUCSA8.0e-9186.36Uncharacterized protein OS=Cucumis sativus GN=Csa_6G010005 PE=4 SV=1[more]
B9SLJ2_RICCO1.3e-5959.16Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0591780 PE=4 SV=1[more]
U5G276_POPTR5.8e-5754.04Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s19970g PE=4 SV=1[more]
V7BAA1_PHAVU2.3e-5354.27Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G225800g PE=4 SV=1[more]
A0A059A5Q1_EUCGR3.9e-5355.15Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02662 PE=4 SV=1[more]
BLAST of Cla006577 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441324|ref|XP_004138432.1|1.2e-9086.36PREDICTED: uncharacterized protein LOC101206202 [Cucumis sativus][more]
gi|659081648|ref|XP_008441441.1|4.4e-9086.36PREDICTED: uncharacterized protein LOC103485559 [Cucumis melo][more]
gi|802546967|ref|XP_012087833.1|2.5e-6157.58PREDICTED: uncharacterized protein LOC105646572 isoform X1 [Jatropha curcas][more]
gi|255571837|ref|XP_002526861.1|1.8e-5959.16PREDICTED: uncharacterized protein LOC8270435 [Ricinus communis][more]
gi|802546969|ref|XP_012087840.1|7.5e-5858.47PREDICTED: uncharacterized protein LOC105646572 isoform X2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU50281watermelon EST collection version 2.0transcribed_cluster
WMU52602watermelon EST collection version 2.0transcribed_cluster
WMU64781watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla006577Cla006577.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU64781WMU64781transcribed_cluster
WMU50281WMU50281transcribed_cluster
WMU52602WMU52602transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainGENE3DG3DSA:2.30.180.10coord: 67..183
score: 3.
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 69..183
score: 2.
IPR000782FAS1 domainPROFILEPS50213FAS1coord: 47..182
score: 14
IPR000782FAS1 domainunknownSSF82153FAS1 domaincoord: 69..183
score: 4.3
NoneNo IPR availablePANTHERPTHR37232FAMILY NOT NAMEDcoord: 1..198
score: 7.9
NoneNo IPR availablePANTHERPTHR37232:SF1SUBFAMILY NOT NAMEDcoord: 1..198
score: 7.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla006577MELO3C008283Melon (DHL92) v3.5.1mewmB328
Cla006577CSPI06G01520Wild cucumber (PI 183967)cpiwmB552
Cla006577Cucsa.136490Cucumber (Gy14) v1cgywmB234
Cla006577CmaCh15G001230Cucurbita maxima (Rimu)cmawmB283
Cla006577CmaCh04G029160Cucurbita maxima (Rimu)cmawmB737
Cla006577CmoCh15G001340Cucurbita moschata (Rifu)cmowmB274
Cla006577Lsi03G003200Bottle gourd (USVL1VR-Ls)lsiwmB277
Cla006577Cp4.1LG13g07210Cucurbita pepo (Zucchini)cpewmB196
Cla006577CsGy6G001600Cucumber (Gy14) v2cgybwmB497
Cla006577MELO3C008283.2Melon (DHL92) v3.6.1medwmB325
Cla006577Carg02114Silver-seed gourdcarwmB0261
Cla006577CsaV3_6G001660Cucumber (Chinese Long) v3cucwmB558
Cla006577Bhi04G001907Wax gourdwgowmB347
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla006577Watermelon (97103) v1wmwmB055
Cla006577Watermelon (97103) v1wmwmB096
Cla006577Watermelon (97103) v1wmwmB111
Cla006577Watermelon (97103) v1wmwmB155
Cla006577Cucumber (Gy14) v1cgywmB256
Cla006577Cucumber (Gy14) v1cgywmB340
Cla006577Cucurbita maxima (Rimu)cmawmB249
Cla006577Cucurbita maxima (Rimu)cmawmB648
Cla006577Cucurbita maxima (Rimu)cmawmB740
Cla006577Cucurbita maxima (Rimu)cmawmB742
Cla006577Cucurbita maxima (Rimu)cmawmB809
Cla006577Cucurbita maxima (Rimu)cmawmB846
Cla006577Cucurbita moschata (Rifu)cmowmB238
Cla006577Cucurbita moschata (Rifu)cmowmB642
Cla006577Cucurbita moschata (Rifu)cmowmB731
Cla006577Cucurbita moschata (Rifu)cmowmB734
Cla006577Cucurbita moschata (Rifu)cmowmB737
Cla006577Cucurbita moschata (Rifu)cmowmB800
Cla006577Cucurbita moschata (Rifu)cmowmB835
Cla006577Wild cucumber (PI 183967)cpiwmB276
Cla006577Wild cucumber (PI 183967)cpiwmB448
Cla006577Wild cucumber (PI 183967)cpiwmB358
Cla006577Melon (DHL92) v3.5.1mewmB385
Cla006577Watermelon (Charleston Gray)wcgwmB080
Cla006577Watermelon (Charleston Gray)wcgwmB108
Cla006577Watermelon (Charleston Gray)wcgwmB266
Cla006577Watermelon (Charleston Gray)wcgwmB392
Cla006577Cucumber (Chinese Long) v2cuwmB073
Cla006577Cucumber (Chinese Long) v2cuwmB275
Cla006577Cucumber (Chinese Long) v2cuwmB351
Cla006577Cucumber (Chinese Long) v2cuwmB533
Cla006577Cucurbita pepo (Zucchini)cpewmB095
Cla006577Cucurbita pepo (Zucchini)cpewmB461
Cla006577Cucurbita pepo (Zucchini)cpewmB464
Cla006577Cucurbita pepo (Zucchini)cpewmB467
Cla006577Cucurbita pepo (Zucchini)cpewmB621
Cla006577Cucurbita pepo (Zucchini)cpewmB852
Cla006577Bottle gourd (USVL1VR-Ls)lsiwmB165
Cla006577Bottle gourd (USVL1VR-Ls)lsiwmB276
Cla006577Cucumber (Gy14) v2cgybwmB257
Cla006577Cucumber (Gy14) v2cgybwmB328
Cla006577Cucumber (Gy14) v2cgybwmB407
Cla006577Melon (DHL92) v3.6.1medwmB379
Cla006577Silver-seed gourdcarwmB0024
Cla006577Silver-seed gourdcarwmB0153
Cla006577Silver-seed gourdcarwmB0555
Cla006577Silver-seed gourdcarwmB0583
Cla006577Silver-seed gourdcarwmB0673
Cla006577Silver-seed gourdcarwmB1001
Cla006577Cucumber (Chinese Long) v3cucwmB084
Cla006577Cucumber (Chinese Long) v3cucwmB284
Cla006577Cucumber (Chinese Long) v3cucwmB369
Cla006577Cucumber (Chinese Long) v3cucwmB459
Cla006577Watermelon (97103) v2wmwmbB357
Cla006577Watermelon (97103) v2wmwmbB362
Cla006577Watermelon (97103) v2wmwmbB371
Cla006577Watermelon (97103) v2wmwmbB380
Cla006577Wax gourdwgowmB054
Cla006577Wax gourdwgowmB464
Cla006577Wax gourdwgowmB572