Cla002778.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGAAGAAAAAGAGGGAGAAAAAAGCTCATTGGGATCAGAAAAGAAGGAAAGGAGGAGGAAGAAGAGTTTGTTTGAATGGAGTAAAGGAGAAGAGGTAAATCTAGTGAAGAAGCTGATTGAGTTCCGTACAAAGAAGATGGGTGACGAAGAATTTTATCCGTTTTTGAGAAACGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAACGAATATTTGGAGAAGAAGTTGGAGTTGAGAAAGATGAGAATCAAACATTTGAAATACGAGAATGATGATGAGATTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACAACTGGAAGCACTTCTACCTCTAAAGCGTTGGATGTGTGCAGTAGGAGTTATTTTGAAGGGTTTTTTGATGGCCATGGCCTTCATGTACAACTATTTACGCCATCTTTTCTCCATTCAACCAACAAGGATATCCACCATTTGTTTTCTCTTCAAAATCATCACTTCTTAATCAAAGCTAATTTGAAGGCTCAACTTGCCCAACTAAAGTACCACATCATTCAACATCCTTACAATAATCCTACCAATCTATAA ATGGGAGAAGAAAAAGAGGGAGAAAAAAGCTCATTGGGATCAGAAAAGAAGGAAAGGAGGAGGAAGAAGAGTTTGTTTGAATGGAGTAAAGGAGAAGAGGTAAATCTAGTGAAGAAGCTGATTGAGTTCCGTACAAAGAAGATGGGTGACGAAGAATTTTATCCGTTTTTGAGAAACGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAACGAATATTTGGAGAAGAAGTTGGAGTTGAGAAAGATGAGAATCAAACATTTGAAATACGAGAATGATGATGAGATTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACAACTGGAAGCACTTCTACCTCTAAAGCGTTGGATGTGTGCAGTAGGAGTTATTTTGAAGGGTTTTTTGATGGCCATGGCCTTCATGTACAACTATTTACGCCATCTTTTCTCCATTCAACCAACAAGGATATCCACCATTTGTTTTCTCTTCAAAATCATCACTTCTTAATCAAAGCTAATTTGAAGGCTCAACTTGCCCAACTAAAGTACCACATCATTCAACATCCTTACAATAATCCTACCAATCTATAA ATGGGAGAAGAAAAAGAGGGAGAAAAAAGCTCATTGGGATCAGAAAAGAAGGAAAGGAGGAGGAAGAAGAGTTTGTTTGAATGGAGTAAAGGAGAAGAGGTAAATCTAGTGAAGAAGCTGATTGAGTTCCGTACAAAGAAGATGGGTGACGAAGAATTTTATCCGTTTTTGAGAAACGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAACGAATATTTGGAGAAGAAGTTGGAGTTGAGAAAGATGAGAATCAAACATTTGAAATACGAGAATGATGATGAGATTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACAACTGGAAGCACTTCTACCTCTAAAGCGTTGGATGTGTGCAGTAGGAGTTATTTTGAAGGGTTTTTTGATGGCCATGGCCTTCATGTACAACTATTTACGCCATCTTTTCTCCATTCAACCAACAAGGATATCCACCATTTGTTTTCTCTTCAAAATCATCACTTCTTAATCAAAGCTAATTTGAAGGCTCAACTTGCCCAACTAAAGTACCACATCATTCAACATCCTTACAATAATCCTACCAATCTATAA MGEEKEGEKSSLGSEKKERRRKKSLFEWSKGEEVNLVKKLIEFRTKKMGDEEFYPFLRNGSLAEVSKIQIFNKIQQLKNEYLEKKLELRKMRIKHLKYENDDEIFELSNRLWGEVETTGSTSTSKALDVCSRSYFEGFFDGHGLHVQLFTPSFLHSTNKDIHHLFSLQNHHFLIKANLKAQLAQLKYHIIQHPYNNPTNL
BLAST of Cla002778 vs. TrEMBL
Match: A0A0A0KPQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G078280 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43 Identity = 104/206 (50.49%), Postives = 132/206 (64.08%), Query Frame = 1
BLAST of Cla002778 vs. TrEMBL
Match: A0A0V0I297_SOLCH (Putative mediator-associated protein 1-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-06 Identity = 36/132 (27.27%), Postives = 71/132 (53.79%), Query Frame = 1
BLAST of Cla002778 vs. TrEMBL
Match: M1D1F7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030831 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-06 Identity = 36/132 (27.27%), Postives = 71/132 (53.79%), Query Frame = 1
BLAST of Cla002778 vs. TrEMBL
Match: A0A022R526_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a007745mg PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-06 Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 1
BLAST of Cla002778 vs. TrEMBL
Match: W9RZS0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019355 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.6e-06 Identity = 39/132 (29.55%), Postives = 68/132 (51.52%), Query Frame = 1
BLAST of Cla002778 vs. NCBI nr
Match: gi|700194534|gb|KGN49711.1| (hypothetical protein Csa_5G078280 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 4.1e-43 Identity = 104/206 (50.49%), Postives = 132/206 (64.08%), Query Frame = 1
BLAST of Cla002778 vs. NCBI nr
Match: gi|460384480|ref|XP_004237939.1| (PREDICTED: mediator-associated protein 1-like [Solanum lycopersicum]) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06 Identity = 37/132 (28.03%), Postives = 72/132 (54.55%), Query Frame = 1
BLAST of Cla002778 vs. NCBI nr
Match: gi|970025246|ref|XP_015073937.1| (PREDICTED: mediator-associated protein 1-like [Solanum pennellii]) HSP 1 Score: 60.5 bits (145), Expect = 4.0e-06 Identity = 36/132 (27.27%), Postives = 71/132 (53.79%), Query Frame = 1
BLAST of Cla002778 vs. NCBI nr
Match: gi|565395317|ref|XP_006363288.1| (PREDICTED: mediator-associated protein 1-like [Solanum tuberosum]) HSP 1 Score: 60.5 bits (145), Expect = 4.0e-06 Identity = 36/132 (27.27%), Postives = 71/132 (53.79%), Query Frame = 1
BLAST of Cla002778 vs. NCBI nr
Match: gi|848883408|ref|XP_012842004.1| (PREDICTED: mediator-associated protein 1-like [Erythranthe guttata]) HSP 1 Score: 60.5 bits (145), Expect = 4.0e-06 Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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