Cla001418.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTGCTTCCTCCATAGGAGGGGGAACCATAGAGACAAGGAAGAAGATCCAGGGATCAATCAGGCATTTATCCCTCCTCCTAACACATTTCAGCCAAGTTACGCTGAGATGGTATCAAAAGGACCAAGACATCACAACCACACAGATTGGAAGGCCCCCCCCCCCCCCCACACATTTAAATCCTCTGATTATGCACCCATTAAACAGAGCAAGTACCCTGAACGGATTGAAGGAAAACAGAGTCCTCAAGAAGACCCTGATTTGCCATGTGGGATGCAAAGCTCGAGCAAAGGAAAACAAAGTAGAATATCGAAATCAGTTCGGCGGCATGAAAGCCAGAATTCGGATGCGTTTTGGATTCAAAAAAATCAGGAGGTCTTCCAAGAAGATTTTAGCAACTTATGGGTGATATCGAGATTATTTGTTTTTGATGATTGGAATGCAAATAGAAATCAATTAGAAGAATCATTCAAGGTTAAATTTACCATGAATCCCCTGTTCTTAGATAAAGCGTTGATCAAGTGTGAGGAAGGAAGAATGGAAGATTGGTTCGGCACTCCCAGGAAATGGCAGGATTTCGGACAATTTCACTTATTAATTGAAAAATGGAACACTATTAAACATAGCCGGCCAGAATTCATCAGAGGATTCGAAGGTTGGCTCTCTATCAACAAACTTCCATTAGAATATTGGAGAAGGAGTACGTTTGAAGCCATTGGAGCTCACTTTGGGGGATTAGAAAGCATTGCACTTGAAACGCTTAACATGTTAAATTGCTCTGAAGCAAGAATTGAAGTTAAAAGGAACATATGTGGTTTGATGCCAGCAACAATTGAAATTGAAGATGAAAAGAGGGAAAATTTCTTTTTAAATTTCGGCGATATTGAGAGTTTAGAAGACTCCAAGCCTCATAAGAGTGCATTATTTCTTTCACACTTCTCAAATCCGATTAATTTACTCAGAATAAAGCAAGTCGCTCAAGTTGAAGACATTGAATTTGATTTTCCGGTTCAAAATTGGGCGTTCCTTCAACAAAAAATGCCAAATACCTCGAGAAATCCGTTTGCAGCCATGGAAAAACACTCTGACAAAAGTCCAAAAAGCTCGCCGGAGAAGATGAGGTCTGCGCCGGCGATTCTTCATTCAAGGGGATCCATCACCCCAAATCGAATCAATGTGAAACCGAAAAAGATGTTAGCAGTCGAGCATTTAATGAAGAAAATAAGTGCTGACGTTGGTTCGGATCCTAAGGAACGGTTCGACTCCTTGCATACTAATTATGAAGAAAATGAAAAGTCGAAGTCTGTGCCGAACTCTTGTCGTCCAAGTGGGTCCATCACCCCAAACCTAGTTAATGAAAAACCAAGGGAGGAGTCAGCAGACGTGCATTTATTGATGGAACAAAGTGCAGACGACCAGTCGGCTCCCAAGGACCTTTTCGAATTCCAGCCGCAAAATTTAAATCCAAGGTCGGCTCCCAAGAACTGA ATGACTTGCTTCCTCCATAGGAGGGGGAACCATAGAGACAAGGAAGAAGATCCAGGGATCAATCAGGCATTTATCCCTCCTCCTAACACATTTCAGCCAAGTTACGCTGAGATGGTATCAAAAGGACCAAGACATCACAACCACACAGATTGGAAGGCCCCCCCCCCCCCCCACACATTTAAATCCTCTGATTATGCACCCATTAAACAGAGCAAGTACCCTGAACGGATTGAAGGAAAACAGAGTCCTCAAGAAGACCCTGATTTGCCATGTGGGATGCAAAGCTCGAGCAAAGGAAAACAAAGTAGAATATCGAAATCAGTTCGGCGGCATGAAAGCCAGAATTCGGATGCGTTTTGGATTCAAAAAAATCAGGAGGTCTTCCAAGAAGATTTTAGCAACTTATGGGTGATATCGAGATTATTTGTTTTTGATGATTGGAATGCAAATAGAAATCAATTAGAAGAATCATTCAAGGTTAAATTTACCATGAATCCCCTGTTCTTAGATAAAGCGTTGATCAAGTGTGAGGAAGGAAGAATGGAAGATTGGTTCGGCACTCCCAGGAAATGGCAGGATTTCGGACAATTTCACTTATTAATTGAAAAATGGAACACTATTAAACATAGCCGGCCAGAATTCATCAGAGGATTCGAAGGTTGGCTCTCTATCAACAAACTTCCATTAGAATATTGGAGAAGGAGTACGTTTGAAGCCATTGGAGCTCACTTTGGGGGATTAGAAAGCATTGCACTTGAAACGCTTAACATGTTAAATTGCTCTGAAGCAAGAATTGAAGTTAAAAGGAACATATGTGGTTTGATGCCAGCAACAATTGAAATTGAAGATGAAAAGAGGGAAAATTTCTTTTTAAATTTCGGCGATATTGAGAGTTTAGAAGACTCCAAGCCTCATAAGAGTGCATTATTTCTTTCACACTTCTCAAATCCGATTAATTTACTCAGAATAAAGCAAGTCGCTCAAGTTGAAGACATTGAATTTGATTTTCCGGTTCAAAATTGGGCGTTCCTTCAACAAAAAATGCCAAATACCTCGAGAAATCCGTTTGCAGCCATGGAAAAACACTCTGACAAAAGTCCAAAAAGCTCGCCGGAGAAGATGAGGTCTGCGCCGGCGATTCTTCATTCAAGGGGATCCATCACCCCAAATCGAATCAATGTGAAACCGAAAAAGATGTTAGCAGTCGAGCATTTAATGAAGAAAATAAGTGCTGACGTTGGTTCGGATCCTAAGGAACGGTTCGACTCCTTGCATACTAATTATGAAGAAAATGAAAAGTCGAAGTCTGTGCCGAACTCTTGTCGTCCAAGTGGGTCCATCACCCCAAACCTAGTTAATGAAAAACCAAGGGAGGAGTCAGCAGACGTGCATTTATTGATGGAACAAAGTGCAGACGACCAGTCGGCTCCCAAGGACCTTTTCGAATTCCAGCCGCAAAATTTAAATCCAAGGTCGGCTCCCAAGAACTGA ATGACTTGCTTCCTCCATAGGAGGGGGAACCATAGAGACAAGGAAGAAGATCCAGGGATCAATCAGGCATTTATCCCTCCTCCTAACACATTTCAGCCAAGTTACGCTGAGATGGTATCAAAAGGACCAAGACATCACAACCACACAGATTGGAAGGCCCCCCCCCCCCCCCACACATTTAAATCCTCTGATTATGCACCCATTAAACAGAGCAAGTACCCTGAACGGATTGAAGGAAAACAGAGTCCTCAAGAAGACCCTGATTTGCCATGTGGGATGCAAAGCTCGAGCAAAGGAAAACAAAGTAGAATATCGAAATCAGTTCGGCGGCATGAAAGCCAGAATTCGGATGCGTTTTGGATTCAAAAAAATCAGGAGGTCTTCCAAGAAGATTTTAGCAACTTATGGGTGATATCGAGATTATTTGTTTTTGATGATTGGAATGCAAATAGAAATCAATTAGAAGAATCATTCAAGGTTAAATTTACCATGAATCCCCTGTTCTTAGATAAAGCGTTGATCAAGTGTGAGGAAGGAAGAATGGAAGATTGGTTCGGCACTCCCAGGAAATGGCAGGATTTCGGACAATTTCACTTATTAATTGAAAAATGGAACACTATTAAACATAGCCGGCCAGAATTCATCAGAGGATTCGAAGGTTGGCTCTCTATCAACAAACTTCCATTAGAATATTGGAGAAGGAGTACGTTTGAAGCCATTGGAGCTCACTTTGGGGGATTAGAAAGCATTGCACTTGAAACGCTTAACATGTTAAATTGCTCTGAAGCAAGAATTGAAGTTAAAAGGAACATATGTGGTTTGATGCCAGCAACAATTGAAATTGAAGATGAAAAGAGGGAAAATTTCTTTTTAAATTTCGGCGATATTGAGAGTTTAGAAGACTCCAAGCCTCATAAGAGTGCATTATTTCTTTCACACTTCTCAAATCCGATTAATTTACTCAGAATAAAGCAAGTCGCTCAAGTTGAAGACATTGAATTTGATTTTCCGGTTCAAAATTGGGCGTTCCTTCAACAAAAAATGCCAAATACCTCGAGAAATCCGTTTGCAGCCATGGAAAAACACTCTGACAAAAGTCCAAAAAGCTCGCCGGAGAAGATGAGGTCTGCGCCGGCGATTCTTCATTCAAGGGGATCCATCACCCCAAATCGAATCAATGTGAAACCGAAAAAGATGTTAGCAGTCGAGCATTTAATGAAGAAAATAAGTGCTGACGTTGGTTCGGATCCTAAGGAACGGTTCGACTCCTTGCATACTAATTATGAAGAAAATGAAAAGTCGAAGTCTGTGCCGAACTCTTGTCGTCCAAGTGGGTCCATCACCCCAAACCTAGTTAATGAAAAACCAAGGGAGGAGTCAGCAGACGTGCATTTATTGATGGAACAAAGTGCAGACGACCAGTCGGCTCCCAAGGACCTTTTCGAATTCCAGCCGCAAAATTTAAATCCAAGGTCGGCTCCCAAGAACTGA MTCFLHRRGNHRDKEEDPGINQAFIPPPNTFQPSYAEMVSKGPRHHNHTDWKAPPPPHTFKSSDYAPIKQSKYPERIEGKQSPQEDPDLPCGMQSSSKGKQSRISKSVRRHESQNSDAFWIQKNQEVFQEDFSNLWVISRLFVFDDWNANRNQLEESFKVKFTMNPLFLDKALIKCEEGRMEDWFGTPRKWQDFGQFHLLIEKWNTIKHSRPEFIRGFEGWLSINKLPLEYWRRSTFEAIGAHFGGLESIALETLNMLNCSEARIEVKRNICGLMPATIEIEDEKRENFFLNFGDIESLEDSKPHKSALFLSHFSNPINLLRIKQVAQVEDIEFDFPVQNWAFLQQKMPNTSRNPFAAMEKHSDKSPKSSPEKMRSAPAILHSRGSITPNRINVKPKKMLAVEHLMKKISADVGSDPKERFDSLHTNYEENEKSKSVPNSCRPSGSITPNLVNEKPREESADVHLLMEQSADDQSAPKDLFEFQPQNLNPRSAPKN
BLAST of Cla001418 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 2.5e-16 Identity = 45/155 (29.03%), Postives = 78/155 (50.32%), Query Frame = 1
BLAST of Cla001418 vs. TrEMBL
Match: A0A0A0KFP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.4e-11 Identity = 39/139 (28.06%), Postives = 64/139 (46.04%), Query Frame = 1
BLAST of Cla001418 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 95.1 bits (235), Expect = 3.6e-16 Identity = 45/155 (29.03%), Postives = 78/155 (50.32%), Query Frame = 1
BLAST of Cla001418 vs. NCBI nr
Match: gi|700192460|gb|KGN47664.1| (hypothetical protein Csa_6G367105 [Cucumis sativus]) HSP 1 Score: 79.3 bits (194), Expect = 2.0e-11 Identity = 39/139 (28.06%), Postives = 64/139 (46.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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