Cla001417.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTTTGTCTCGTTTGAAAGGAAAGTACTTCCTTTGAACAATTGCACAGGAAACTTTTGTTGTCCGAAGGCCAATTTTTGGGTCAACTCCACCATTCCTCTCTGTCAATTCAAGGTAATAATTGACTTTGATTTATATGCTATTTTAATTATTGTGTGGCATCATACTTGTACGCTTTAATCTGTGGTAAATGATCAAGTTGGTCTTTTTTTCCCCATATAGGTTAAAGATTCTGGCCTAATAGAGGATCAAACATCCGGAGCTCTTGAAGTTGATTTTGCTAATGAGTATCTTGGTGGTGGTGCTCTTCATTCTGGCTGTGTGCAGGTCTAA ATGGGCTTTGTCTCGTTTGAAAGGAAAGTACTTCCTTTGAACAATTGCACAGGAAACTTTTGTTGTCCGAAGGCCAATTTTTGGGTCAACTCCACCATTCCTCTCTGTCAATTCAAGGTTAAAGATTCTGGCCTAATAGAGGATCAAACATCCGGAGCTCTTGAAGTTGATTTTGCTAATGAGTATCTTGGTGGTGGTGCTCTTCATTCTGGCTGTGTGCAGGTCTAA ATGGGCTTTGTCTCGTTTGAAAGGAAAGTACTTCCTTTGAACAATTGCACAGGAAACTTTTGTTGTCCGAAGGCCAATTTTTGGGTCAACTCCACCATTCCTCTCTGTCAATTCAAGGTTAAAGATTCTGGCCTAATAGAGGATCAAACATCCGGAGCTCTTGAAGTTGATTTTGCTAATGAGTATCTTGGTGGTGGTGCTCTTCATTCTGGCTGTGTGCAGGTCTAA MGFVSFERKVLPLNNCTGNFCCPKANFWVNSTIPLCQFKVKDSGLIEDQTSGALEVDFANEYLGGGALHSGCVQV
BLAST of Cla001417 vs. Swiss-Prot
Match: PARG1_ARATH (Poly(ADP-ribose) glycohydrolase 1 OS=Arabidopsis thaliana GN=PARG1 PE=1 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 6.7e-15 Identity = 41/74 (55.41%), Postives = 45/74 (60.81%), Query Frame = 1
BLAST of Cla001417 vs. Swiss-Prot
Match: PARG2_ARATH (Probable poly(ADP-ribose) glycohydrolase 2 OS=Arabidopsis thaliana GN=PARG2 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.1e-13 Identity = 39/73 (53.42%), Postives = 43/73 (58.90%), Query Frame = 1
BLAST of Cla001417 vs. TrEMBL
Match: A0A0A0LNA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123570 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.5e-34 Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 1
BLAST of Cla001417 vs. TrEMBL
Match: M5VQA0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004452mg PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 2.2e-20 Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 1
BLAST of Cla001417 vs. TrEMBL
Match: A0A0S3T6Q7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G234800 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 3.7e-20 Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of Cla001417 vs. TrEMBL
Match: A0A151SD07_CAJCA (Poly(ADP-ribose) glycohydrolase 1 OS=Cajanus cajan GN=KK1_025447 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 3.7e-20 Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of Cla001417 vs. TrEMBL
Match: A0A0L9TAJ2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan442s006100 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 3.7e-20 Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of Cla001417 vs. NCBI nr
Match: gi|449442353|ref|XP_004138946.1| (PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X1 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 2.2e-34 Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 1
BLAST of Cla001417 vs. NCBI nr
Match: gi|778668329|ref|XP_011649080.1| (PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X2 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 2.2e-34 Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 1
BLAST of Cla001417 vs. NCBI nr
Match: gi|700206327|gb|KGN61446.1| (hypothetical protein Csa_2G123570 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 2.2e-34 Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 1
BLAST of Cla001417 vs. NCBI nr
Match: gi|659082095|ref|XP_008441668.1| (PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 1.1e-33 Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 1
BLAST of Cla001417 vs. NCBI nr
Match: gi|659082103|ref|XP_008441672.1| (PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 1.1e-33 Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
|