ClCG11G004020.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G004020.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Long-chain-alcohol oxidase
Location	CG_Chr11 : 4261946 .. 4262218 (+)
Sequence length	273

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGTTGCAGGATGGGAATTGGAGCCAAGGATTATGTGGTGAATCAAATATGGGAGGTGGAAGGGGTCTTCATTGCTGATTCTAGTGTTTTTCCAACTGCTTTGAGAGTTAATCCAGTGGTTACAGTTCAGGCTATTGCTTATTGCACTCCACAATTTGTTCTGGAAACTCTTAAGAGGGAGAGAATGGTTACAAAAGATACACATGAAACCATTGAACTTATACAAAACACCCATTTACAACTTGGGGGGTCATGTGTCATGTTTTGA

mRNA sequence

ATGGGAAGTTGCAGGATGGGAATTGGAGCCAAGGATTATGTGGTGAATCAAATATGGGAGGTGGAAGGGGTCTTCATTGCTGATTCTAGTGTTTTTCCAACTGCTTTGAGAGTTAATCCAGTGGTTACAGTTCAGGCTATTGCTTATTGCACTCCACAATTTGTTCTGGAAACTCTTAAGAGGGAGAGAATGGTTACAAAAGATACACATGAAACCATTGAACTTATACAAAACACCCATTTACAACTTGGGGGGTCATGTGTCATGTTTTGA

Coding sequence (CDS)

ATGGGAAGTTGCAGGATGGGAATTGGAGCCAAGGATTATGTGGTGAATCAAATATGGGAGGTGGAAGGGGTCTTCATTGCTGATTCTAGTGTTTTTCCAACTGCTTTGAGAGTTAATCCAGTGGTTACAGTTCAGGCTATTGCTTATTGCACTCCACAATTTGTTCTGGAAACTCTTAAGAGGGAGAGAATGGTTACAAAAGATACACATGAAACCATTGAACTTATACAAAACACCCATTTACAACTTGGGGGGTCATGTGTCATGTTTTGA

Protein sequence

MGSCRMGIGAKDYVVNQIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERMVTKDTHETIELIQNTHLQLGGSCVMF

Homology

[Close]

BLAST of ClCG11G004020.1 vs. Swiss-Prot
Match: FAO4A_ARATH (Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-13
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGI  ++  V    + WEVE +F+AD+SVFPTAL VNP+VTVQ+IAYC    V++
Sbjct: 661 MGSCRMGIRPEESAVRPTGETWEVERLFVADTSVFPTALGVNPMVTVQSIAYCIGLNVVD 720

Query: 61  TLKRER 64
            LK+++
Sbjct: 721 VLKKKK 726

[Close]

BLAST of ClCG11G004020.1 vs. Swiss-Prot
Match: FAO1_LOTJA (Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-11
Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG+  K+  V++    WE +G+F+ D+S+ PTA+ VNP++T+Q+ AYC    V++
Sbjct: 683 MGSCRMGMNEKEGAVDENGESWEAQGLFVCDASLLPTAVGVNPMITIQSTAYCISNRVVD 742

Query: 61  TLKRERM 65
            LKR+++
Sbjct: 743 YLKRDQI 749

[Close]

BLAST of ClCG11G004020.1 vs. Swiss-Prot
Match: FAO4B_ARATH (Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B PE=2 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-10
Identity = 27/68 (39.71%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG+ A++  +++    WE EG+F+ D S+ P+A+ VNP++T+Q+ AYC    +++
Sbjct: 681 MGSCRMGVTAEEGALDENGESWEAEGLFVCDGSILPSAVGVNPMITIQSTAYCISSKIVD 740

Query: 61  TLKRERMV 66
           +L+ +  V
Sbjct: 741 SLQNKTKV 748

[Close]

BLAST of ClCG11G004020.1 vs. Swiss-Prot
Match: FAO1_ARATH (Long-chain-alcohol oxidase FAO1 OS=Arabidopsis thaliana GN=FAO1 PE=3 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 5.0e-09
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           +G CRMG   K+  ++   + WE E +++ D+SV PTAL VNP++TVQ+ AYC    + E
Sbjct: 691 IGCCRMGATEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQSTAYCISNRIAE 750

Query: 61  TLKRER 64
            +K+ +
Sbjct: 751 LMKKRK 756

[Close]

BLAST of ClCG11G004020.1 vs. Swiss-Prot
Match: FAO2_LOTJA (Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.2e-08
Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           M SCRM    ++  V++    WE +G+++ D SV P+A+ VNP++T+Q+ AYC    + E
Sbjct: 685 MTSCRMSATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIQSTAYCIASNIAE 744

Query: 61  TLKRE 63
           +LK++
Sbjct: 745 SLKKQ 749

[Close]

BLAST of ClCG11G004020.1 vs. TrEMBL
Match: A0A0A0L1L5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G246910 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-20
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 73  MGSCRMGIGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 132

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 133 TLKRKR 138

[Close]

BLAST of ClCG11G004020.1 vs. TrEMBL
Match: A0A061G722_THECC (Long-chain fatty alcohol dehydrogenase family protein OS=Theobroma cacao GN=TCM_016707 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-17
Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 1


Query: 1    MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
            MGSCRMGI  K  VVNQ+   WEVEG+F+ADSSVFPTAL VNP+VT+QAIAYCT Q VL+
Sbjct: 1072 MGSCRMGIDPKQSVVNQMGETWEVEGLFVADSSVFPTALGVNPMVTIQAIAYCTAQSVLD 1131

Query: 61   TLKRERMV 66
             LKR++ +
Sbjct: 1132 VLKRKKSI 1139

[Close]

BLAST of ClCG11G004020.1 vs. TrEMBL
Match: G7L7T8_MEDTR (Long-chain-alcohol oxidase FAO1-like protein OS=Medicago truncatula GN=MTR_8g072210 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-16
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG   K+ VVNQ    WEVEG+++AD+SVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 745 MGSCRMGTNPKESVVNQTGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQHVLE 804

Query: 61  TLKRER 64
            LKR+R
Sbjct: 805 VLKRKR 810

[Close]

BLAST of ClCG11G004020.1 vs. TrEMBL
Match: M5WR25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014756mg PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-16
Identity = 44/71 (61.97%), Postives = 59/71 (83.10%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG+ +K  V+NQ+   WEVEG+F+AD+SVFPTAL VNP+VTVQAIAYCT Q +L+
Sbjct: 738 MGSCRMGVDSKQSVLNQMGETWEVEGLFVADTSVFPTALGVNPMVTVQAIAYCTSQSILQ 797

Query: 61  TLKRERMVTKD 69
            L+R+++  K+
Sbjct: 798 VLRRKKVEYKN 808

[Close]

BLAST of ClCG11G004020.1 vs. TrEMBL
Match: A0A151SI04_CAJCA (Putative GMC-type oxidoreductase Rv0492c/MT0511/MT0512 family OS=Cajanus cajan GN=KK1_000601 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-16
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG  AK  VVNQ    WEVEG+++AD+SVFPTAL VNP+VTVQAIAYCT Q V+E
Sbjct: 744 MGSCRMGCNAKQSVVNQTGETWEVEGLYVADASVFPTALGVNPMVTVQAIAYCTAQSVVE 803

Query: 61  TLKRER 64
            L+R+R
Sbjct: 804 VLRRKR 809

[Close]

BLAST of ClCG11G004020.1 vs. TAIR10
Match: AT4G19380.1 (AT4G19380.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 75.1 bits (183), Expect = 2.5e-14
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGI  ++  V    + WEVE +F+AD+SVFPTAL VNP+VTVQ+IAYC    V++
Sbjct: 661 MGSCRMGIRPEESAVRPTGETWEVERLFVADTSVFPTALGVNPMVTVQSIAYCIGLNVVD 720

Query: 61  TLKRER 64
            LK+++
Sbjct: 721 VLKKKK 726

[Close]

BLAST of ClCG11G004020.1 vs. TAIR10
Match: AT4G28570.1 (AT4G28570.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-11
Identity = 27/68 (39.71%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG+ A++  +++    WE EG+F+ D S+ P+A+ VNP++T+Q+ AYC    +++
Sbjct: 681 MGSCRMGVTAEEGALDENGESWEAEGLFVCDGSILPSAVGVNPMITIQSTAYCISSKIVD 740

Query: 61  TLKRERMV 66
           +L+ +  V
Sbjct: 741 SLQNKTKV 748

[Close]

BLAST of ClCG11G004020.1 vs. TAIR10
Match: AT1G03990.1 (AT1G03990.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 61.6 bits (148), Expect = 2.8e-10
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           +G CRMG   K+  ++   + WE E +++ D+SV PTAL VNP++TVQ+ AYC    + E
Sbjct: 691 IGCCRMGATEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQSTAYCISNRIAE 750

Query: 61  TLKRER 64
            +K+ +
Sbjct: 751 LMKKRK 756

[Close]

BLAST of ClCG11G004020.1 vs. TAIR10
Match: AT3G23410.1 (AT3G23410.1 fatty alcohol oxidase 3)

HSP 1 Score: 53.5 bits (127), Expect = 7.7e-08
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYC 51
           MGSCR+G   K+  ++   + WE E +F+ D+S  P+A+ VNP++TV + AYC
Sbjct: 679 MGSCRIGENEKEGAIDLNGESWEAEKLFVCDASALPSAVGVNPMITVMSTAYC 731

[Close]

BLAST of ClCG11G004020.1 vs. NCBI nr
Match: gi|449466091|ref|XP_004150760.1| (PREDICTED: long-chain-alcohol oxidase FAO4A [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-20
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 551 MGSCRMGIGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 610

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 611 TLKRKR 616

[Close]

BLAST of ClCG11G004020.1 vs. NCBI nr
Match: gi|700198838|gb|KGN53996.1| (hypothetical protein Csa_4G246910 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-20
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 73  MGSCRMGIGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 132

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 133 TLKRKR 138

[Close]

BLAST of ClCG11G004020.1 vs. NCBI nr
Match: gi|659087027|ref|XP_008444238.1| (PREDICTED: long-chain-alcohol oxidase FAO4A isoform X1 [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG GAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 755 MGSCRMGSGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 814

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 815 TLKRKR 820

[Close]

BLAST of ClCG11G004020.1 vs. NCBI nr
Match: gi|659087029|ref|XP_008444239.1| (PREDICTED: long-chain-alcohol oxidase FAO4A isoform X2 [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG GAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 665 MGSCRMGSGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 724

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 725 TLKRKR 730

[Close]

BLAST of ClCG11G004020.1 vs. NCBI nr
Match: gi|590680506|ref|XP_007040880.1| (Long-chain fatty alcohol dehydrogenase family protein [Theobroma cacao])

HSP 1 Score: 95.9 bits (237), Expect = 3.8e-17
Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 1


Query: 1    MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
            MGSCRMGI  K  VVNQ+   WEVEG+F+ADSSVFPTAL VNP+VT+QAIAYCT Q VL+
Sbjct: 1072 MGSCRMGIDPKQSVVNQMGETWEVEGLFVADSSVFPTALGVNPMVTIQAIAYCTAQSVLD 1131

Query: 61   TLKRERMV 66
             LKR++ +
Sbjct: 1132 VLKRKKSI 1139

The following BLAST results are available for this feature:

BLAST of ClCG11G004020.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAO4A_ARATH	4.4e-13	56.06	Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2	[more]
FAO1_LOTJA	2.4e-11	44.78	Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1	[more]
FAO4B_ARATH	3.5e-10	39.71	Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B PE=2 SV=2	[more]
FAO1_ARATH	5.0e-09	40.91	Long-chain-alcohol oxidase FAO1 OS=Arabidopsis thaliana GN=FAO1 PE=3 SV=2	[more]
FAO2_LOTJA	7.2e-08	38.46	Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1	[more]

BLAST of ClCG11G004020.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1L5_CUCSA	2.0e-20	83.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G246910 PE=4 SV=1	[more]
A0A061G722_THECC	2.7e-17	69.12	Long-chain fatty alcohol dehydrogenase family protein OS=Theobroma cacao GN=TCM_...	[more]
G7L7T8_MEDTR	1.0e-16	71.21	Long-chain-alcohol oxidase FAO1-like protein OS=Medicago truncatula GN=MTR_8g072...	[more]
M5WR25_PRUPE	1.7e-16	61.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014756mg PE=4 SV=1	[more]
A0A151SI04_CAJCA	2.3e-16	69.70	Putative GMC-type oxidoreductase Rv0492c/MT0511/MT0512 family OS=Cajanus cajan G...	[more]

BLAST of ClCG11G004020.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19380.1	2.5e-14	56.06	Long-chain fatty alcohol dehydrogenase family protein	[more]
AT4G28570.1	2.0e-11	39.71	Long-chain fatty alcohol dehydrogenase family protein	[more]
AT1G03990.1	2.8e-10	40.91	Long-chain fatty alcohol dehydrogenase family protein	[more]
AT3G23410.1	7.7e-08	43.40	fatty alcohol oxidase 3	[more]

BLAST of ClCG11G004020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466091\|ref\|XP_004150760.1\|	2.8e-20	83.33	PREDICTED: long-chain-alcohol oxidase FAO4A [Cucumis sativus]	[more]
gi\|700198838\|gb\|KGN53996.1\|	2.8e-20	83.33	hypothetical protein Csa_4G246910 [Cucumis sativus]	[more]
gi\|659087027\|ref\|XP_008444238.1\|	1.4e-19	81.82	PREDICTED: long-chain-alcohol oxidase FAO4A isoform X1 [Cucumis melo]	[more]
gi\|659087029\|ref\|XP_008444239.1\|	1.4e-19	81.82	PREDICTED: long-chain-alcohol oxidase FAO4A isoform X2 [Cucumis melo]	[more]
gi\|590680506\|ref\|XP_007040880.1\|	3.8e-17	69.12	Long-chain fatty alcohol dehydrogenase family protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007867	GMC_OxRtase_C
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0016020	membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0046577	long-chain-alcohol oxidase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG11G004020	ClCG11G004020	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG11G004020.1	ClCG11G004020.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG11G004020.1.cds1	ClCG11G004020.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007867	Glucose-methanol-choline oxidoreductase, C-terminal	PFAM	PF05199	GMC_oxred_C	coord: 1..50 score: 1.6
IPR023753	FAD/NAD(P)-binding domain	GENE3D	G3DSA:3.50.50.60		coord: 1..55 score: 1.3
IPR023753	FAD/NAD(P)-binding domain	unknown	SSF51905	FAD/NAD(P)-binding domain	coord: 2..60 score: 8.8
None	No IPR available	PANTHER	PTHR10668	PHYTOENE DEHYDROGENASE	coord: 1..79 score: 5.4
None	No IPR available	PANTHER	PTHR10668:SF80	LONG-CHAIN-ALCOHOL OXIDASE FAO4A	coord: 1..79 score: 5.4