ClCG11G004020 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G004020
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Long-chain-alcohol oxidase
Location	CG_Chr11 : 4261946 .. 4262218 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGTTGCAGGATGGGAATTGGAGCCAAGGATTATGTGGTGAATCAAATATGGGAGGTGGAAGGGGTCTTCATTGCTGATTCTAGTGTTTTTCCAACTGCTTTGAGAGTTAATCCAGTGGTTACAGTTCAGGCTATTGCTTATTGCACTCCACAATTTGTTCTGGAAACTCTTAAGAGGGAGAGAATGGTTACAAAAGATACACATGAAACCATTGAACTTATACAAAACACCCATTTACAACTTGGGGGGTCATGTGTCATGTTTTGA

mRNA sequence

ATGGGAAGTTGCAGGATGGGAATTGGAGCCAAGGATTATGTGGTGAATCAAATATGGGAGGTGGAAGGGGTCTTCATTGCTGATTCTAGTGTTTTTCCAACTGCTTTGAGAGTTAATCCAGTGGTTACAGTTCAGGCTATTGCTTATTGCACTCCACAATTTGTTCTGGAAACTCTTAAGAGGGAGAGAATGGTTACAAAAGATACACATGAAACCATTGAACTTATACAAAACACCCATTTACAACTTGGGGGGTCATGTGTCATGTTTTGA

Coding sequence (CDS)

ATGGGAAGTTGCAGGATGGGAATTGGAGCCAAGGATTATGTGGTGAATCAAATATGGGAGGTGGAAGGGGTCTTCATTGCTGATTCTAGTGTTTTTCCAACTGCTTTGAGAGTTAATCCAGTGGTTACAGTTCAGGCTATTGCTTATTGCACTCCACAATTTGTTCTGGAAACTCTTAAGAGGGAGAGAATGGTTACAAAAGATACACATGAAACCATTGAACTTATACAAAACACCCATTTACAACTTGGGGGGTCATGTGTCATGTTTTGA

Protein sequence

MGSCRMGIGAKDYVVNQIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERMVTKDTHETIELIQNTHLQLGGSCVMF

Homology

[Close]

BLAST of ClCG11G004020 vs. Swiss-Prot
Match: FAO4A_ARATH (Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-13
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGI  ++  V    + WEVE +F+AD+SVFPTAL VNP+VTVQ+IAYC    V++
Sbjct: 661 MGSCRMGIRPEESAVRPTGETWEVERLFVADTSVFPTALGVNPMVTVQSIAYCIGLNVVD 720

Query: 61  TLKRER 64
            LK+++
Sbjct: 721 VLKKKK 726

[Close]

BLAST of ClCG11G004020 vs. Swiss-Prot
Match: FAO1_LOTJA (Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-11
Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG+  K+  V++    WE +G+F+ D+S+ PTA+ VNP++T+Q+ AYC    V++
Sbjct: 683 MGSCRMGMNEKEGAVDENGESWEAQGLFVCDASLLPTAVGVNPMITIQSTAYCISNRVVD 742

Query: 61  TLKRERM 65
            LKR+++
Sbjct: 743 YLKRDQI 749

[Close]

BLAST of ClCG11G004020 vs. Swiss-Prot
Match: FAO4B_ARATH (Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B PE=2 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-10
Identity = 27/68 (39.71%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG+ A++  +++    WE EG+F+ D S+ P+A+ VNP++T+Q+ AYC    +++
Sbjct: 681 MGSCRMGVTAEEGALDENGESWEAEGLFVCDGSILPSAVGVNPMITIQSTAYCISSKIVD 740

Query: 61  TLKRERMV 66
           +L+ +  V
Sbjct: 741 SLQNKTKV 748

[Close]

BLAST of ClCG11G004020 vs. Swiss-Prot
Match: FAO1_ARATH (Long-chain-alcohol oxidase FAO1 OS=Arabidopsis thaliana GN=FAO1 PE=3 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 5.0e-09
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           +G CRMG   K+  ++   + WE E +++ D+SV PTAL VNP++TVQ+ AYC    + E
Sbjct: 691 IGCCRMGATEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQSTAYCISNRIAE 750

Query: 61  TLKRER 64
            +K+ +
Sbjct: 751 LMKKRK 756

[Close]

BLAST of ClCG11G004020 vs. Swiss-Prot
Match: FAO2_LOTJA (Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.2e-08
Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           M SCRM    ++  V++    WE +G+++ D SV P+A+ VNP++T+Q+ AYC    + E
Sbjct: 685 MTSCRMSATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIQSTAYCIASNIAE 744

Query: 61  TLKRE 63
           +LK++
Sbjct: 745 SLKKQ 749

[Close]

BLAST of ClCG11G004020 vs. TrEMBL
Match: A0A0A0L1L5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G246910 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-20
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 73  MGSCRMGIGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 132

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 133 TLKRKR 138

[Close]

BLAST of ClCG11G004020 vs. TrEMBL
Match: A0A061G722_THECC (Long-chain fatty alcohol dehydrogenase family protein OS=Theobroma cacao GN=TCM_016707 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-17
Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 1


Query: 1    MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
            MGSCRMGI  K  VVNQ+   WEVEG+F+ADSSVFPTAL VNP+VT+QAIAYCT Q VL+
Sbjct: 1072 MGSCRMGIDPKQSVVNQMGETWEVEGLFVADSSVFPTALGVNPMVTIQAIAYCTAQSVLD 1131

Query: 61   TLKRERMV 66
             LKR++ +
Sbjct: 1132 VLKRKKSI 1139

[Close]

BLAST of ClCG11G004020 vs. TrEMBL
Match: G7L7T8_MEDTR (Long-chain-alcohol oxidase FAO1-like protein OS=Medicago truncatula GN=MTR_8g072210 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-16
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG   K+ VVNQ    WEVEG+++AD+SVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 745 MGSCRMGTNPKESVVNQTGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQHVLE 804

Query: 61  TLKRER 64
            LKR+R
Sbjct: 805 VLKRKR 810

[Close]

BLAST of ClCG11G004020 vs. TrEMBL
Match: M5WR25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014756mg PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-16
Identity = 44/71 (61.97%), Postives = 59/71 (83.10%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG+ +K  V+NQ+   WEVEG+F+AD+SVFPTAL VNP+VTVQAIAYCT Q +L+
Sbjct: 738 MGSCRMGVDSKQSVLNQMGETWEVEGLFVADTSVFPTALGVNPMVTVQAIAYCTSQSILQ 797

Query: 61  TLKRERMVTKD 69
            L+R+++  K+
Sbjct: 798 VLRRKKVEYKN 808

[Close]

BLAST of ClCG11G004020 vs. TrEMBL
Match: A0A151SI04_CAJCA (Putative GMC-type oxidoreductase Rv0492c/MT0511/MT0512 family OS=Cajanus cajan GN=KK1_000601 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-16
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG  AK  VVNQ    WEVEG+++AD+SVFPTAL VNP+VTVQAIAYCT Q V+E
Sbjct: 744 MGSCRMGCNAKQSVVNQTGETWEVEGLYVADASVFPTALGVNPMVTVQAIAYCTAQSVVE 803

Query: 61  TLKRER 64
            L+R+R
Sbjct: 804 VLRRKR 809

[Close]

BLAST of ClCG11G004020 vs. TAIR10
Match: AT4G19380.1 (AT4G19380.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 75.1 bits (183), Expect = 2.5e-14
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGI  ++  V    + WEVE +F+AD+SVFPTAL VNP+VTVQ+IAYC    V++
Sbjct: 661 MGSCRMGIRPEESAVRPTGETWEVERLFVADTSVFPTALGVNPMVTVQSIAYCIGLNVVD 720

Query: 61  TLKRER 64
            LK+++
Sbjct: 721 VLKKKK 726

[Close]

BLAST of ClCG11G004020 vs. TAIR10
Match: AT4G28570.1 (AT4G28570.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-11
Identity = 27/68 (39.71%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG+ A++  +++    WE EG+F+ D S+ P+A+ VNP++T+Q+ AYC    +++
Sbjct: 681 MGSCRMGVTAEEGALDENGESWEAEGLFVCDGSILPSAVGVNPMITIQSTAYCISSKIVD 740

Query: 61  TLKRERMV 66
           +L+ +  V
Sbjct: 741 SLQNKTKV 748

[Close]

BLAST of ClCG11G004020 vs. TAIR10
Match: AT1G03990.1 (AT1G03990.1 Long-chain fatty alcohol dehydrogenase family protein)

HSP 1 Score: 61.6 bits (148), Expect = 2.8e-10
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           +G CRMG   K+  ++   + WE E +++ D+SV PTAL VNP++TVQ+ AYC    + E
Sbjct: 691 IGCCRMGATEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQSTAYCISNRIAE 750

Query: 61  TLKRER 64
            +K+ +
Sbjct: 751 LMKKRK 756

[Close]

BLAST of ClCG11G004020 vs. TAIR10
Match: AT3G23410.1 (AT3G23410.1 fatty alcohol oxidase 3)

HSP 1 Score: 53.5 bits (127), Expect = 7.7e-08
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYC 51
           MGSCR+G   K+  ++   + WE E +F+ D+S  P+A+ VNP++TV + AYC
Sbjct: 679 MGSCRIGENEKEGAIDLNGESWEAEKLFVCDASALPSAVGVNPMITVMSTAYC 731

[Close]

BLAST of ClCG11G004020 vs. NCBI nr
Match: gi|449466091|ref|XP_004150760.1| (PREDICTED: long-chain-alcohol oxidase FAO4A [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-20
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 551 MGSCRMGIGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 610

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 611 TLKRKR 616

[Close]

BLAST of ClCG11G004020 vs. NCBI nr
Match: gi|700198838|gb|KGN53996.1| (hypothetical protein Csa_4G246910 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-20
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 73  MGSCRMGIGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 132

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 133 TLKRKR 138

[Close]

BLAST of ClCG11G004020 vs. NCBI nr
Match: gi|659087027|ref|XP_008444238.1| (PREDICTED: long-chain-alcohol oxidase FAO4A isoform X1 [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG GAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 755 MGSCRMGSGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 814

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 815 TLKRKR 820

[Close]

BLAST of ClCG11G004020 vs. NCBI nr
Match: gi|659087029|ref|XP_008444239.1| (PREDICTED: long-chain-alcohol oxidase FAO4A isoform X2 [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 1   MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
           MGSCRMG GAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLE
Sbjct: 665 MGSCRMGSGAKDSVVNQRGETWEVEGLFIADSSVFPTALGVNPMVTVQAIAYCTAQSVLE 724

Query: 61  TLKRER 64
           TLKR+R
Sbjct: 725 TLKRKR 730

[Close]

BLAST of ClCG11G004020 vs. NCBI nr
Match: gi|590680506|ref|XP_007040880.1| (Long-chain fatty alcohol dehydrogenase family protein [Theobroma cacao])

HSP 1 Score: 95.9 bits (237), Expect = 3.8e-17
Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 1


Query: 1    MGSCRMGIGAKDYVVNQI---WEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLE 60
            MGSCRMGI  K  VVNQ+   WEVEG+F+ADSSVFPTAL VNP+VT+QAIAYCT Q VL+
Sbjct: 1072 MGSCRMGIDPKQSVVNQMGETWEVEGLFVADSSVFPTALGVNPMVTIQAIAYCTAQSVLD 1131

Query: 61   TLKRERMV 66
             LKR++ +
Sbjct: 1132 VLKRKKSI 1139

The following BLAST results are available for this feature:

BLAST of ClCG11G004020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAO4A_ARATH	4.4e-13	56.06	Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2	[more]
FAO1_LOTJA	2.4e-11	44.78	Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1	[more]
FAO4B_ARATH	3.5e-10	39.71	Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B PE=2 SV=2	[more]
FAO1_ARATH	5.0e-09	40.91	Long-chain-alcohol oxidase FAO1 OS=Arabidopsis thaliana GN=FAO1 PE=3 SV=2	[more]
FAO2_LOTJA	7.2e-08	38.46	Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1	[more]

BLAST of ClCG11G004020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1L5_CUCSA	2.0e-20	83.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G246910 PE=4 SV=1	[more]
A0A061G722_THECC	2.7e-17	69.12	Long-chain fatty alcohol dehydrogenase family protein OS=Theobroma cacao GN=TCM_...	[more]
G7L7T8_MEDTR	1.0e-16	71.21	Long-chain-alcohol oxidase FAO1-like protein OS=Medicago truncatula GN=MTR_8g072...	[more]
M5WR25_PRUPE	1.7e-16	61.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014756mg PE=4 SV=1	[more]
A0A151SI04_CAJCA	2.3e-16	69.70	Putative GMC-type oxidoreductase Rv0492c/MT0511/MT0512 family OS=Cajanus cajan G...	[more]

BLAST of ClCG11G004020 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19380.1	2.5e-14	56.06	Long-chain fatty alcohol dehydrogenase family protein	[more]
AT4G28570.1	2.0e-11	39.71	Long-chain fatty alcohol dehydrogenase family protein	[more]
AT1G03990.1	2.8e-10	40.91	Long-chain fatty alcohol dehydrogenase family protein	[more]
AT3G23410.1	7.7e-08	43.40	fatty alcohol oxidase 3	[more]

BLAST of ClCG11G004020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466091\|ref\|XP_004150760.1\|	2.8e-20	83.33	PREDICTED: long-chain-alcohol oxidase FAO4A [Cucumis sativus]	[more]
gi\|700198838\|gb\|KGN53996.1\|	2.8e-20	83.33	hypothetical protein Csa_4G246910 [Cucumis sativus]	[more]
gi\|659087027\|ref\|XP_008444238.1\|	1.4e-19	81.82	PREDICTED: long-chain-alcohol oxidase FAO4A isoform X1 [Cucumis melo]	[more]
gi\|659087029\|ref\|XP_008444239.1\|	1.4e-19	81.82	PREDICTED: long-chain-alcohol oxidase FAO4A isoform X2 [Cucumis melo]	[more]
gi\|590680506\|ref\|XP_007040880.1\|	3.8e-17	69.12	Long-chain fatty alcohol dehydrogenase family protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007867	GMC_OxRtase_C
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0016020	membrane
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0046577	long-chain-alcohol oxidase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G004020.1	ClCG11G004020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007867	Glucose-methanol-choline oxidoreductase, C-terminal	PFAM	PF05199	GMC_oxred_C	coord: 1..50 score: 1.6
IPR023753	FAD/NAD(P)-binding domain	GENE3D	G3DSA:3.50.50.60		coord: 1..55 score: 1.3
IPR023753	FAD/NAD(P)-binding domain	unknown	SSF51905	FAD/NAD(P)-binding domain	coord: 2..60 score: 8.8
None	No IPR available	PANTHER	PTHR10668	PHYTOENE DEHYDROGENASE	coord: 1..79 score: 5.4
None	No IPR available	PANTHER	PTHR10668:SF80	LONG-CHAIN-ALCOHOL OXIDASE FAO4A	coord: 1..79 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G004020	Bottle gourd (USVL1VR-Ls)	lsiwcgB039
ClCG11G004020	Bottle gourd (USVL1VR-Ls)	lsiwcgB085
ClCG11G004020	Cucumber (Gy14) v2	cgybwcgB495
ClCG11G004020	Cucumber (Gy14) v2	cgybwcgB103
ClCG11G004020	Melon (DHL92) v3.6.1	medwcgB080
ClCG11G004020	Melon (DHL92) v3.6.1	medwcgB186
ClCG11G004020	Silver-seed gourd	carwcgB0295
ClCG11G004020	Silver-seed gourd	carwcgB0307
ClCG11G004020	Cucumber (Chinese Long) v3	cucwcgB120
ClCG11G004020	Cucumber (Chinese Long) v3	cucwcgB558
ClCG11G004020	Watermelon (97103) v2	wcgwmbB065
ClCG11G004020	Watermelon (97103) v2	wcgwmbB068
ClCG11G004020	Wax gourd	wcgwgoB167
ClCG11G004020	Watermelon (Charleston Gray)	wcgwcgB063
ClCG11G004020	Cucumber (Gy14) v1	cgywcgB155
ClCG11G004020	Cucumber (Gy14) v1	cgywcgB642
ClCG11G004020	Cucurbita maxima (Rimu)	cmawcgB477
ClCG11G004020	Cucurbita maxima (Rimu)	cmawcgB517
ClCG11G004020	Cucurbita moschata (Rifu)	cmowcgB455
ClCG11G004020	Cucurbita moschata (Rifu)	cmowcgB476
ClCG11G004020	Cucurbita moschata (Rifu)	cmowcgB515
ClCG11G004020	Wild cucumber (PI 183967)	cpiwcgB111
ClCG11G004020	Wild cucumber (PI 183967)	cpiwcgB563
ClCG11G004020	Cucumber (Chinese Long) v2	cuwcgB104
ClCG11G004020	Cucumber (Chinese Long) v2	cuwcgB534
ClCG11G004020	Melon (DHL92) v3.5.1	mewcgB081
ClCG11G004020	Melon (DHL92) v3.5.1	mewcgB190
ClCG11G004020	Watermelon (97103) v1	wcgwmB101
ClCG11G004020	Watermelon (97103) v1	wcgwmB107
ClCG11G004020	Cucurbita pepo (Zucchini)	cpewcgB229
ClCG11G004020	Cucurbita pepo (Zucchini)	cpewcgB251
ClCG11G004020	Cucurbita pepo (Zucchini)	cpewcgB634