ClCG08G002280.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGCAACAACAGGCAAAAGAAAGCCCACTCATCTTTTTCAATATTTAGCCTTTTCAAATCTAGAAGGGGTCGAAAAGGAGACCACTGCGACCACAGCTGCTCTTGGCCAAATGAGATGCCGAGATCGAGCAAGGTGTGGCCAAGCGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTTGAATCTGAGCGCCAAACTGTTACCGTACCTTCCAATGGAACAAAACCCAATATGTAA ATGGGAGGCAACAACAGGCAAAAGAAAGCCCACTCATCTTTTTCAATATTTAGCCTTTTCAAATCTAGAAGGGGTCGAAAAGGAGACCACTGCGACCACAGCTGCTCTTGGCCAAATGAGATGCCGAGATCGAGCAAGGTGTGGCCAAGCGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTTGAATCTGAGCGCCAAACTGTTACCGTACCTTCCAATGGAACAAAACCCAATATGTAA ATGGGAGGCAACAACAGGCAAAAGAAAGCCCACTCATCTTTTTCAATATTTAGCCTTTTCAAATCTAGAAGGGGTCGAAAAGGAGACCACTGCGACCACAGCTGCTCTTGGCCAAATGAGATGCCGAGATCGAGCAAGGTGTGGCCAAGCGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAATCGTGTTTTTGAATCTGAGCGCCAAACTGTTACCGTACCTTCCAATGGAACAAAACCCAATATGTAA MGGNNRQKKAHSSFSIFSLFKSRRGRKGDHCDHSCSWPNEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPSNGTKPNM
BLAST of ClCG08G002280.1 vs. TrEMBL
Match: A0A0A0KAK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014890 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.2e-42 Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. TrEMBL
Match: A0A0A0K7Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014900 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.4e-42 Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. TrEMBL
Match: A0A0A0KBW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014870 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.7e-41 Identity = 81/97 (83.51%), Postives = 87/97 (89.69%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. TrEMBL
Match: A0A0A0K8W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016905 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 3.5e-34 Identity = 71/99 (71.72%), Postives = 83/99 (83.84%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. TrEMBL
Match: A0A0A0K8V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014880 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 4.5e-34 Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. TAIR10
Match: AT3G05858.1 (AT3G05858.1 unknown protein) HSP 1 Score: 70.9 bits (172), Expect = 5.1e-13 Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. TAIR10
Match: AT5G26620.1 (AT5G26620.1 unknown protein) HSP 1 Score: 58.2 bits (139), Expect = 3.4e-09 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. NCBI nr
Match: gi|700190665|gb|KGN45869.1| (hypothetical protein Csa_6G014890 [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42 Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. NCBI nr
Match: gi|700190666|gb|KGN45870.1| (hypothetical protein Csa_6G014900 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 4.9e-42 Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. NCBI nr
Match: gi|700190663|gb|KGN45867.1| (hypothetical protein Csa_6G014870 [Cucumis sativus]) HSP 1 Score: 176.4 bits (446), Expect = 2.5e-41 Identity = 81/97 (83.51%), Postives = 87/97 (89.69%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. NCBI nr
Match: gi|700190669|gb|KGN45873.1| (hypothetical protein Csa_6G016905 [Cucumis sativus]) HSP 1 Score: 152.1 bits (383), Expect = 5.0e-34 Identity = 71/99 (71.72%), Postives = 83/99 (83.84%), Query Frame = 1
BLAST of ClCG08G002280.1 vs. NCBI nr
Match: gi|700190664|gb|KGN45868.1| (hypothetical protein Csa_6G014880 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 6.5e-34 Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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