ClCG08G000200.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGGAGTTGTCTCACATTGGAAGTTTTAGCAATGCCAAAAGGGTATAAATATGAAGGCTTGCTAAAGGGGCTTCTAACTTGTAGATGTGGTGGAAATAGAAACTTTCTCTACAAGCACGCTGCCGCTTGTCCTAATGGGTTCAGGTAACCATGTTCTAATTTTTACTACCTTTCTATTTTAAAATTTTATCATTTTTTTTTAATTAAAACGTTTATATTAAGTTAAGGTCCATATTTATTGGATCTAATTAAATTTTTTCCCATTTTGATCCACCGCTCCTTTTTCTTCTTCATATACAATAAGTTTTTCAGAAAAATATACAAACATTTTTTCTACCAGATTTTCTTCCTCTATTTTCTTTTGACACGTTTATGAGCATAGTTTCCGATGGTTCCATTCATTCATCTAGCGAGTGAACGCTTGAGTTGGAAAATTGTGTTAACCTTGGGGAGCAATTGACATTCGCAATTTAGCACCGTGGTCGTGCTGAATTTTGCTTTCAATGTAGTGGTTCTTCCATAGCACAACAACATGACATTTGATTGCAAGAATTTGAAAGAAAAAATATATTTCTTTTATCCCTTTTCTTCCAAATGTCTATTAGAAACGATACGATCCTTCCTGATCTGTCTAAATTGGAGCCACTGGACGGATCAAACTATCGACACTGGTCTCATAAGCTCATATGATTGTCTTCGAGTAACTAGAGATCGATTATATCCTCACCTCCACCAAATCTGATAAAGGTAAGGATGATGTGATTATCGATTCAGACAGTTCCAAAGTTGTAGATCTAGATAGATCCAAGGTTGCAGATCCAACATAAGCTAGTTGGTGCAAGTTTGATCATGTAGCCGATTCAGTCAAGTATGAGAAAGATAACAAAACAATACATTGTCATCTTCTCAACCACATGAATGATTCGTTATTTGATTTGTTCATGGTGCAAAAATCAGCAAAGATAACTTGAGACACTTTGGAATCCAGGTATGGAGGAGATGATGCGGGTAGAAAAAAAAAATACATTGTTAGCAAATAACTACAGTTCTGGATGATGGATGACAAGCGATTATGGACCAGGTTTCACGAGTACAAGAATCTGGTAGCAAATGTGTTGGCTAAAGTTATGAAGATGTGTGAGATTCTTCAAGCAAACCAACAGCTCACGAAATTCCCACCTTCTTGGAGTGACTACCGTAACCATTTGAAGTATAAAAAGGATCTAACCCTCTAG ATGGGAAAGGAGTTGTCTCACATTGGAAGTTTTAGCAATGCCAAAAGGATCGATTATATCCTCACCTCCACCAAATCTGATAAAGGTAAGGATGATGTGATTATCGATTCAGACAGTTCCAAAGTTGTAGATCTAGATAGATCCAAGTTTGATCATGTAGCCGATTCAGTCAAGTATGAGAAAGATAACAAAACAATACATTGTCATCTTCTCAACCACATGAATGATTCGTTATTTGATTTGTTCATGTTCTGGATGATGGATGACAAGCGATTATGGACCAGGTTTCACGAGTACAAGAATCTGGTAGCAAATGTGTTGGCTAAAGTTATGAAGATGTGTGAGATTCTTCAAGCAAACCAACAGCTCACGAAATTCCCACCTTCTTGGAGTGACTACCGTAACCATTTGAAGTATAAAAAGGATCTAACCCTCTAG ATGGGAAAGGAGTTGTCTCACATTGGAAGTTTTAGCAATGCCAAAAGGATCGATTATATCCTCACCTCCACCAAATCTGATAAAGGTAAGGATGATGTGATTATCGATTCAGACAGTTCCAAAGTTGTAGATCTAGATAGATCCAAGTTTGATCATGTAGCCGATTCAGTCAAGTATGAGAAAGATAACAAAACAATACATTGTCATCTTCTCAACCACATGAATGATTCGTTATTTGATTTGTTCATGTTCTGGATGATGGATGACAAGCGATTATGGACCAGGTTTCACGAGTACAAGAATCTGGTAGCAAATGTGTTGGCTAAAGTTATGAAGATGTGTGAGATTCTTCAAGCAAACCAACAGCTCACGAAATTCCCACCTTCTTGGAGTGACTACCGTAACCATTTGAAGTATAAAAAGGATCTAACCCTCTAG MGKELSHIGSFSNAKRIDYILTSTKSDKGKDDVIIDSDSSKVVDLDRSKFDHVADSVKYEKDNKTIHCHLLNHMNDSLFDLFMFWMMDDKRLWTRFHEYKNLVANVLAKVMKMCEILQANQQLTKFPPSWSDYRNHLKYKKDLTL
BLAST of ClCG08G000200.1 vs. TrEMBL
Match: E5GBG5_CUCME (Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 9.6e-25 Identity = 74/177 (41.81%), Postives = 90/177 (50.85%), Query Frame = 1
BLAST of ClCG08G000200.1 vs. NCBI nr
Match: gi|307135946|gb|ADN33807.1| (ty1-copia retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 121.3 bits (303), Expect = 1.4e-24 Identity = 74/177 (41.81%), Postives = 90/177 (50.85%), Query Frame = 1
BLAST of ClCG08G000200.1 vs. NCBI nr
Match: gi|659126166|ref|XP_008463045.1| (PREDICTED: uncharacterized protein LOC103501285 [Cucumis melo]) HSP 1 Score: 120.2 bits (300), Expect = 3.1e-24 Identity = 73/177 (41.24%), Postives = 91/177 (51.41%), Query Frame = 1
BLAST of ClCG08G000200.1 vs. NCBI nr
Match: gi|659113205|ref|XP_008456453.1| (PREDICTED: uncharacterized protein LOC103496396 [Cucumis melo]) HSP 1 Score: 119.0 bits (297), Expect = 6.8e-24 Identity = 73/177 (41.24%), Postives = 90/177 (50.85%), Query Frame = 1
BLAST of ClCG08G000200.1 vs. NCBI nr
Match: gi|659102488|ref|XP_008452160.1| (PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo]) HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22 Identity = 71/177 (40.11%), Postives = 90/177 (50.85%), Query Frame = 1
BLAST of ClCG08G000200.1 vs. NCBI nr
Match: gi|747058586|ref|XP_011075636.1| (PREDICTED: uncharacterized protein LOC105160070 [Sesamum indicum]) HSP 1 Score: 110.2 bits (274), Expect = 3.2e-21 Identity = 59/123 (47.97%), Postives = 76/123 (61.79%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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