ClCG08G000180.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTACAAGATCTAAGAATGATATTCAGAAACCTAAAGTGTATGTTACTTCTTCATTGTTTATGAAAATTACAAATAGATCATCTAGTTACATTTTGATCTATGTAGATGATATAATAATCACGGGCTCTTCCACCTCAGATATTAATACACTGATTACTCAGTTAAAAGCAACTTTTTCCTTAAAGGATCTTGGCCATCTCACCTATTTTCTTGGCGGATTATTTTTGTCTCAAGAAAATTATATTTCAGATCTTCAAGCAAAGATGTCTGAAGTTGATGTCATTACTACTCCTATGATAAGTTATTTAATTTTATCAGCCACTGGAAGTGAATATCTTGAAAATCCTCATTTGTATAGAAGCATTATTGGAGCACTCCAAAATGCAAAAATTATCCCACTGGCAAGAAGTTAAGAGGATTCTTCGATATCTAAAAGAAACATCTCGATTTGGTTTAATTCTTAGGCAACCTTCAAGCTTCTCTGTTCAAGCTTTTGCTGATGCTGGCTGGGCATCAGATCCAGACGACAGGCACTCCACCTCTAGTTTATGTGTCTTTTTTGGAGGAAACTTAATCACATGGGGTTCAAAGAAACAACATACTGTTTCAAGATCAAGCACAGAAGCTGAGTTTTGATGCCTTGCAAATGCTAGTACAGAACTTATTTGGTTAAGATTCTTGTTTAAAGAACTTGGACTTCACTTGATAAACCACCAATCTTGTGGTGTGACAATCTTGCAGCTGTCCATAAATTCAATTCTTCCAAACATGTCGAATTAAACATTTATTTTGTCAGAGACTTGGTACTTCAATAGAGAATTTCAGTTCTAGCACAAGTTGCTGACATCTTTACCAAGCCTCTAGCTGCACATTCATTTGTTCCATTAAGAACTAAATCATGTGTAGTAAATGTTGCAGACATAGGCTCGAGGGGGCATTAAGGCAGCACATTAGTGTAGTCATTTCTCTCTAATTAGTTTGGTTGTTAGAAAAACATTGTTATTCTGTTTTAGAGCTACTCCTCACCTATTTAGAGAGTAGTCCCTTGATCACAATATCAATGAGAAAGTGAAGTATTCTTCTGTGATCATTCTTTGATATTTCTTCTTTTCTCGTTTACTTTTAGATAACATTCCGATCATGTGA ATGGTTACAAGATCTAAGAATGATATTCAGAAACCTAAAGTGTATGTTACTTCTTCATTGTTTATGAAAATTACAAATAGATCATCTAGTTACATTTTGATCTATGTAGATGATATAATAATCACGGGCTCTTCCACCTCAGATATTAATACACTGATTACTCAGTTAAAAGCAACTTTTTCCTTAAAGGATCTTGGCCATCTCACCTATTTTCTTGGCGGATTATTTTTGTCTCAAGAAAATTATATTTCAGATCTTCAAGCAAAGATGTCTGAAGTTGATGTCATTACTACTCCTATGATAAATAACATTCCGATCATGTGA ATGGTTACAAGATCTAAGAATGATATTCAGAAACCTAAAGTGTATGTTACTTCTTCATTGTTTATGAAAATTACAAATAGATCATCTAGTTACATTTTGATCTATGTAGATGATATAATAATCACGGGCTCTTCCACCTCAGATATTAATACACTGATTACTCAGTTAAAAGCAACTTTTTCCTTAAAGGATCTTGGCCATCTCACCTATTTTCTTGGCGGATTATTTTTGTCTCAAGAAAATTATATTTCAGATCTTCAAGCAAAGATGTCTGAAGTTGATGTCATTACTACTCCTATGATAAATAACATTCCGATCATGTGA MVTRSKNDIQKPKVYVTSSLFMKITNRSSSYILIYVDDIIITGSSTSDINTLITQLKATFSLKDLGHLTYFLGGLFLSQENYISDLQAKMSEVDVITTPMINNIPIM
BLAST of ClCG08G000180.1 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.9e-11 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. TrEMBL
Match: A5BMC8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041406 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-15 Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. TrEMBL
Match: A0A151TEU9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_011811 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.3e-14 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. TrEMBL
Match: A5AXT6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026811 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 7.3e-14 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. TrEMBL
Match: A0A151QXN3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_043871 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-13 Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. TrEMBL
Match: A0A151T9R0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_018386 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-13 Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 2.7e-12 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8) HSP 1 Score: 55.5 bits (132), Expect = 2.4e-08 Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. NCBI nr
Match: gi|147854093|emb|CAN83392.1| (hypothetical protein VITISV_041406 [Vitis vinifera]) HSP 1 Score: 90.1 bits (222), Expect = 2.5e-15 Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. NCBI nr
Match: gi|729463265|ref|XP_010525654.1| (PREDICTED: uncharacterized protein LOC104803422 [Tarenaya hassleriana]) HSP 1 Score: 85.5 bits (210), Expect = 6.2e-14 Identity = 44/93 (47.31%), Postives = 68/93 (73.12%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. NCBI nr
Match: gi|1012354378|gb|KYP65565.1| (hypothetical protein KK1_011811 [Cajanus cajan]) HSP 1 Score: 85.5 bits (210), Expect = 6.2e-14 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. NCBI nr
Match: gi|147843193|emb|CAN78448.1| (hypothetical protein VITISV_026811 [Vitis vinifera]) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-13 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 1
BLAST of ClCG08G000180.1 vs. NCBI nr
Match: gi|955370889|ref|XP_014623268.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Glycine max]) HSP 1 Score: 84.0 bits (206), Expect = 1.8e-13 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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