ClCG06G001330.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAACACTTCTTGTGAGGCAAAAGTTTGTTCTCATCTCTCTAGTATGGCAAATAATGAAGAAGAAGGCAATAACAATCCCTCAACAAACAACCACCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAGCTCAACATCCACTGTTGGCCAAAGTAAGTATACCGTAATCCATCCGTTTAAGCTTTCGGGTTTTCTTTTTATTCATTAATTTTTTTTATTTTTATTAGATGGGGTTGTTCAGCAGGGAAATACCAGCTGAAATTTGAGGCAGAAGAGACTTGTTATTTAGTGAAAGGGAAAGTAAAAGCTTATCCAAAAGGAATTGATTCTTCTTCTTCTTGTGAGGAATACACTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGCCTTAGCTGCACTTGGGAGGTCTCTGTTGCTGTTGATAAATTCTACAAGTTTGAATCTCAATCTTAAATATTTTTAACTATAATTACCATTTTCCCATTCCTTTGTAAATAAATATTTTTT CCCAAACACTTCTTGTGAGGCAAAAGTTTGTTCTCATCTCTCTAGTATGGCAAATAATGAAGAAGAAGGCAATAACAATCCCTCAACAAACAACCACCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAGCTCAACATCCACTGTTGGCCAAAATGGGGTTGTTCAGCAGGGAAATACCAGCTGAAATTTGAGGCAGAAGAGACTTGTTATTTAGTGAAAGGGAAAGTAAAAGCTTATCCAAAAGGAATTGATTCTTCTTCTTCTTGTGAGGAATACACTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGCCTTAGCTGCACTTGGGAGGTCTCTGTTGCTGTTGATAAATTCTACAAGTTTGAATCTCAATCTTAAATATTTTTAACTATAATTACCATTTTCCCATTCCTTTGTAAATAAATATTTTTT ATGGCAAATAATGAAGAAGAAGGCAATAACAATCCCTCAACAAACAACCACCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAGCTCAACATCCACTGTTGGCCAAAATGGGGTTGTTCAGCAGGGAAATACCAGCTGAAATTTGAGGCAGAAGAGACTTGTTATTTAGTGAAAGGGAAAGTAAAAGCTTATCCAAAAGGAATTGATTCTTCTTCTTCTTGTGAGGAATACACTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGCCTTAGCTGCACTTGGGAGGTCTCTGTTGCTGTTGATAAATTCTACAAGTTTGAATCTCAATCTTAA MANNEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWEVSVAVDKFYKFESQS
BLAST of ClCG06G001330.1 vs. TrEMBL
Match: W9QZN5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015900 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.3e-40 Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. TrEMBL
Match: A0A058ZV10_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01055 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 5.0e-40 Identity = 81/123 (65.85%), Postives = 100/123 (81.30%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. TrEMBL
Match: I1JPA0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G168900 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 4.2e-39 Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. TrEMBL
Match: A0A0B2PNV2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016498 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 5.5e-39 Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. TrEMBL
Match: A0A061DW96_THECC (RmlC-like cupins superfamily protein OS=Theobroma cacao GN=TCM_003844 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38 Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. TAIR10
Match: AT4G28703.1 (AT4G28703.1 RmlC-like cupins superfamily protein) HSP 1 Score: 134.8 bits (338), Expect = 3.4e-32 Identity = 64/100 (64.00%), Postives = 74/100 (74.00%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. TAIR10
Match: AT3G04300.1 (AT3G04300.1 RmlC-like cupins superfamily protein) HSP 1 Score: 131.3 bits (329), Expect = 3.8e-31 Identity = 59/97 (60.82%), Postives = 67/97 (69.07%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. TAIR10
Match: AT4G10300.1 (AT4G10300.1 RmlC-like cupins superfamily protein) HSP 1 Score: 119.0 bits (297), Expect = 1.9e-27 Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. TAIR10
Match: AT4G10280.1 (AT4G10280.1 RmlC-like cupins superfamily protein) HSP 1 Score: 76.3 bits (186), Expect = 1.4e-14 Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. NCBI nr
Match: gi|659120045|ref|XP_008459983.1| (PREDICTED: uncharacterized protein LOC103498932 [Cucumis melo]) HSP 1 Score: 216.9 bits (551), Expect = 1.9e-53 Identity = 109/123 (88.62%), Postives = 110/123 (89.43%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. NCBI nr
Match: gi|449445646|ref|XP_004140583.1| (PREDICTED: uncharacterized protein LOC101208389 [Cucumis sativus]) HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52 Identity = 107/119 (89.92%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. NCBI nr
Match: gi|703081972|ref|XP_010091831.1| (hypothetical protein L484_015900 [Morus notabilis]) HSP 1 Score: 173.7 bits (439), Expect = 1.9e-40 Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. NCBI nr
Match: gi|702509059|ref|XP_010040360.1| (PREDICTED: uncharacterized protein LOC104429154 [Eucalyptus grandis]) HSP 1 Score: 171.8 bits (434), Expect = 7.1e-40 Identity = 81/123 (65.85%), Postives = 100/123 (81.30%), Query Frame = 1
BLAST of ClCG06G001330.1 vs. NCBI nr
Match: gi|1012180695|ref|XP_015968097.1| (PREDICTED: uncharacterized protein LOC107491707 [Arachis duranensis]) HSP 1 Score: 171.8 bits (434), Expect = 7.1e-40 Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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