ClCG05G011060.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G011060.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Major latex-like protein
Location	CG_Chr05 : 12896601 .. 12898261 (+)
Sequence length	468

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCAAATTGATAGCATTGTGGCAAAGGTTGAGCTAAAATCTCCTATAGAGAAGTTCTATGGCTTCTTCAGAAACCATTTAGGAGATTTGATCAATCTATTTCCTGAACTGTACCAGAGCATTCACCTTGTAGAAGGAGAACATCTCTCTGCTGGTTCTGTTATACTATTTAAATATCATCTTGGTGAGAGATTACTTCTTCTCTTTTATTCTTCTCCCAATTAATACATTTAAATTCCACATAATGTTCCATTTCATGTAGCTATTTTTTCGTTCATACTATTAAAACATAACTATTTTGGTCTATGTGAGTTGTTCTAATGGTAAATAAGGGACAACATGAATTTCATCGAGAGCTAAGAGTGAATTGGTTCAATCTATGGCGTAGTCAACTACCTACTTTATTCACATATCTAACTATCATGAGTTTGTTTTAATGATATGTATATGTAATTTTTAAGAGAGTGAGAAATGAAAAATGAACAAGAGTGAATATTATCCAACACAGGCATTTTCTTTTCAAAATTAAGGTTGAAACAAACAAAAGCACACGATAATCTAGCCAATGGGAGAAAACAATCAAAATATATATTCAACAAAGTGATATAGTATACTCATTTTTGGTGACTCCATATCTCATGTAATTGTGGAAAATATATCAGAAAAAAATTGAAAGAAACCATTTTAAATATAAACAAAAAGTAGAAAATTATTAGTTGACCAATGATTACTGCATCAAACGATCGTCAACCAACATTTATTTACTGAGATTGATGTATTTATAGTAAATTAATGGCAGTTAAATTATAGGTATAATTATTAGTAGGTTTTTAAAACTTTAAATTTTATATATAATATCAGACCCAAGACTTTCAATTTGAAGTATAATATATATATATATATATATATATTAAATTAGTTCGTCCATTAGTTATGATTTATGGAACTTTGAACGTTTAGTTTTGTGCACGGAAGGCTCAGATCCTCTAACCTTTTTCTACTTTCTCTTTTGTATAGAATTGATCTCTAGCTCTTCTTGTACATATTGAACTTATAGTTTCGGAATATGATAAAAGTGTTAAGGATGTGTCAACTTAAGAATGTGTCAACTTAATTGAGATATTCTAGTGTATATCCTAATCTTTCTTTATTCTAGTATCTTTATTCTAGTATCTTGTTCTAAAAAAAAAAAAATTGTGCCTAATAAAATCCATGAATTTGAAAAAATTTGACAAAAAGCTGAACTAATTTGTAATTTTAAAAATTTGGTTGAGAGATCAAATAGACATAAACCTCAACGTTCTAAGAAAATTTGTAATTTAACGTTGATCTCTTTTTATTTATTTATTTATTTATTTATTTAACGATGAGAAACAGGACATGAACTTGTATCCGAAAAATGGTCAATGAGAGTTGTGGATGATGCAAAAAAATATATAATCTATGAAGCTGTTGAAGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGTTTGAAGCTATTGATGGAGGCTTAAGCAAAGTAAGAGGAAGCTTTGCAAAATGGACTGTTGAGTATGAAAAGGCTTATGAAAATGTGTCTTCACCAGCAAGCCACATGGAATTGTTTCTCAAAATTTCAAAAGGCGTCGATGCTTATCTTTCCAACTACTAA

mRNA sequence

ATGAGCCAAATTGATAGCATTGTGGCAAAGGTTGAGCTAAAATCTCCTATAGAGAAGTTCTATGGCTTCTTCAGAAACCATTTAGGAGATTTGATCAATCTATTTCCTGAACTGTACCAGAGCATTCACCTTGTAGAAGGAGAACATCTCTCTGCTGGTTCTGTTATACTATTTAAATATCATCTTGGACATGAACTTGTATCCGAAAAATGGTCAATGAGAGTTGTGGATGATGCAAAAAAATATATAATCTATGAAGCTGTTGAAGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGTTTGAAGCTATTGATGGAGGCTTAAGCAAAGTAAGAGGAAGCTTTGCAAAATGGACTGTTGAGTATGAAAAGGCTTATGAAAATGTGTCTTCACCAGCAAGCCACATGGAATTGTTTCTCAAAATTTCAAAAGGCGTCGATGCTTATCTTTCCAACTACTAA

Coding sequence (CDS)

ATGAGCCAAATTGATAGCATTGTGGCAAAGGTTGAGCTAAAATCTCCTATAGAGAAGTTCTATGGCTTCTTCAGAAACCATTTAGGAGATTTGATCAATCTATTTCCTGAACTGTACCAGAGCATTCACCTTGTAGAAGGAGAACATCTCTCTGCTGGTTCTGTTATACTATTTAAATATCATCTTGGACATGAACTTGTATCCGAAAAATGGTCAATGAGAGTTGTGGATGATGCAAAAAAATATATAATCTATGAAGCTGTTGAAGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGTTTGAAGCTATTGATGGAGGCTTAAGCAAAGTAAGAGGAAGCTTTGCAAAATGGACTGTTGAGTATGAAAAGGCTTATGAAAATGTGTCTTCACCAGCAAGCCACATGGAATTGTTTCTCAAAATTTCAAAAGGCGTCGATGCTTATCTTTCCAACTACTAA

Protein sequence

MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKYHLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKVRGSFAKWTVEYEKAYENVSSPASHMELFLKISKGVDAYLSNY

Homology

[Close]

BLAST of ClCG05G011060.1 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 45/145 (31.03%), Postives = 71/145 (48.97%), Query Frame = 1


Query: 7   IVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKYHLGHEL 66
           +V +VE+ S    FY  FR  L  +  + P   Q + L+EG   + GSVI FKY +  + 
Sbjct: 7   MVKQVEILSDGIVFYEIFRYRLYLISEMSPVNIQGVDLLEGNWGTVGSVIFFKYTIDGKE 66

Query: 67  VSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKVRGSFAKWTVEYEK 126
            + K  +  +D+  K + ++ VEGD+ + YK     F  I    +K   +   WT  YEK
Sbjct: 67  KTAKDIVEAIDEETKSVTFKIVEGDLMELYKT----FIIIVQVDTKGEHNSVTWTFHYEK 126

Query: 127 AYENVSSPASHMELFLKISKGVDAY 152
             E+V  P + M   ++I+K ++ Y
Sbjct: 127 LKEDVEEPNTLMNFCIEITKDIETY 147

[Close]

BLAST of ClCG05G011060.1 vs. Swiss-Prot
Match: MLP22_PAPSO (Major latex protein 22 OS=Papaver somniferum GN=MLP22 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 43/150 (28.67%), Postives = 77/150 (51.33%), Query Frame = 1


Query: 4   IDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKYHLG 63
           +  +V ++E+    +++Y  F++H  DL N  P +Y+ +  VEG+ +++G +  + Y + 
Sbjct: 12  VGKLVTELEVNCNADEYYKIFKHH-EDLPNAIPHIYRGVKAVEGDRITSGFIKEWHYIIE 71

Query: 64  HELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEA-IDGGLSKVRGSFAKWTV 123
            + ++ K      D+A+  I +  VEG +   YK    KF+A +    +   GS   W V
Sbjct: 72  GKPLTCKERTTYEDEART-IHHSTVEGVLLDDYK----KFDATLVNPKADGHGSIVTWIV 131

Query: 124 EYEKAYENVSSPASHMELFLKISKGVDAYL 153
           EYEK  E+   P S++  F KI + ++ YL
Sbjct: 132 EYEKINEDSPVPISYL-TFHKIIEDLNTYL 154

[Close]

BLAST of ClCG05G011060.1 vs. TrEMBL
Match: A0A0A0LAY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342350 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.1e-58
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           MS+ DSIVAKVELKS IEKFYGFFRNH+ DL+NLFP+LYQ I LVEG++LSAGSVILFKY
Sbjct: 1   MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVILFKY 60

Query: 61  HLG-HELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFA 120
           HLG  ++VSEKW +R VDDAKK IIYEA+EGD+QKYYKVLRAK E + G  SK+ RGSFA
Sbjct: 61  HLGADQVVSEKWLIRAVDDAKKCIIYEAIEGDLQKYYKVLRAKLEVVHGRSSKIGRGSFA 120

Query: 121 KWTVEYEKAYENVSSPASHMELFLKISKGVDAY 152
           KWT+E+EKA ENV SP SHME+F+KISKGVDAY
Sbjct: 121 KWTIEFEKANENVPSPDSHMEIFVKISKGVDAY 153

[Close]

BLAST of ClCG05G011060.1 vs. TrEMBL
Match: N0DK19_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-55
Identity = 109/155 (70.32%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE YQSI LVEG+H S+GSV+ FK+
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             G EL +EKW++RVVDD KKYIIYEAVEGD  K +KVLRAKFE ++GGLSKV RG+F K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLSN 155
           WTVE+EKA +NV+SP +++ELF+KISKGVDAY SN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSN 155

[Close]

BLAST of ClCG05G011060.1 vs. TrEMBL
Match: N0DKL1_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.8e-54
Identity = 108/154 (70.13%), Postives = 129/154 (83.77%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE YQSI LVEG+H S+GSV+ FK+
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             G EL +EKW++RVVDD KKYIIYEAVEGD  K +KVLRAKFE ++GGLSKV RG+F K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLS 154
           WTVE+EKA +NV+SP +++ELF+KISKGVDAY S
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFS 154

[Close]

BLAST of ClCG05G011060.1 vs. TrEMBL
Match: N0DK07_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR3 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-47
Identity = 98/155 (63.23%), Postives = 119/155 (76.77%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE + SI LVEG+H   GS++L KY
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPENFNSIQLVEGQHFDRGSLVLSKY 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             GHE   EKW +R VDD KKYI+YEAVEG+  K +KVLRAK EA+ GG +KV  G+F K
Sbjct: 61  EFGHEHRVEKWVIRAVDDVKKYIVYEAVEGEALKQFKVLRAKVEAVHGGSTKVGGGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLSN 155
            T+E+EKA ENV+SP  ++ELF+KI+KGVDAY SN
Sbjct: 121 LTIEFEKANENVASPEIYLELFVKIAKGVDAYFSN 155

[Close]

BLAST of ClCG05G011060.1 vs. TrEMBL
Match: A0A0A0LA34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-46
Identity = 92/152 (60.53%), Postives = 122/152 (80.26%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           MSQ +SI AKV LKSP EKFYGFFRNH+GDL+++FP+ +QS   +EGE  + GSV+ ++Y
Sbjct: 1   MSQTESIWAKVPLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQY 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKVRGSFAKW 120
           HLG    + K  MRVVDD KK I+YE ++GD+ K+YKV RAK EA++GGL+KV G+FAKW
Sbjct: 61  HLGSPAAA-KIKMRVVDDVKKSIVYEFMDGDVLKHYKVFRAKLEAVNGGLNKVGGNFAKW 120

Query: 121 TVEYEKAYENVSSPASHMELFLKISKGVDAYL 153
           T+EY+KA ENV SP ++MEL +K+SKG+DAY+
Sbjct: 121 TIEYQKANENVPSPETYMELAVKVSKGLDAYI 151

[Close]

BLAST of ClCG05G011060.1 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-13
Identity = 46/154 (29.87%), Postives = 77/154 (50.00%), Query Frame = 1


Query: 2   SQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY- 61
           S +  +  +VE+K+P   FY  +      +    P   QS  L +GE  + GS++ + Y 
Sbjct: 14  SLLGKLEVEVEIKAPAAIFYHIYAGRPHHVAKATPRNVQSCDLHDGEWGTVGSIVYWNYV 73

Query: 62  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYK--VLRAKFEAIDGGLSKVRGSFA 121
           H G   V+++  + +V+  KK I +  +EGD+   YK  ++  +    +GG     GS  
Sbjct: 74  HEGQAKVAKE-RIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGG----TGSVV 133

Query: 122 KWTVEYEKAYENVSSPASHMELFLKISKGVDAYL 153
           KW +EYEK  ENV  P + +  F +++K +D +L
Sbjct: 134 KWHIEYEKIDENVPHPENLLPFFAEMTKEIDEHL 162

[Close]

BLAST of ClCG05G011060.1 vs. TAIR10
Match: AT5G28000.1 (AT5G28000.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 8.9e-12
Identity = 42/148 (28.38%), Postives = 70/148 (47.30%), Query Frame = 1


Query: 7   IVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKYHLGHEL 66
           +  +V++KSP EKFY  +      +        Q+  L+EGE  +  S++ + Y    + 
Sbjct: 17  VEVEVDIKSPAEKFYQVYVGRPDHVAKATSSKVQACDLLEGEWGTISSIVNWNYVYAGKA 76

Query: 67  VSEKWSMRVVDDAKKYIIYEAVEGDMQKYYK--VLRAKFEAIDGGLSKVRGSFAKWTVEY 126
              K  + +V+  KK I +  +EGD+   YK   +       +GG+    GS AKW +EY
Sbjct: 77  KVAKERIELVEPEKKLIKFRVIEGDVLAVYKNFFITISVTPKEGGV----GSVAKWHLEY 136

Query: 127 EKAYENVSSPASHMELFLKISKGVDAYL 153
           EK   NV  P + +    +++K +D +L
Sbjct: 137 EKNDVNVPDPENFLPFLAEMTKEIDEHL 160

[Close]

BLAST of ClCG05G011060.1 vs. NCBI nr
Match: gi|700202699|gb|KGN57832.1| (hypothetical protein Csa_3G342350 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 5.9e-58
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           MS+ DSIVAKVELKS IEKFYGFFRNH+ DL+NLFP+LYQ I LVEG++LSAGSVILFKY
Sbjct: 1   MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVILFKY 60

Query: 61  HLG-HELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFA 120
           HLG  ++VSEKW +R VDDAKK IIYEA+EGD+QKYYKVLRAK E + G  SK+ RGSFA
Sbjct: 61  HLGADQVVSEKWLIRAVDDAKKCIIYEAIEGDLQKYYKVLRAKLEVVHGRSSKIGRGSFA 120

Query: 121 KWTVEYEKAYENVSSPASHMELFLKISKGVDAY 152
           KWT+E+EKA ENV SP SHME+F+KISKGVDAY
Sbjct: 121 KWTIEFEKANENVPSPDSHMEIFVKISKGVDAY 153

[Close]

BLAST of ClCG05G011060.1 vs. NCBI nr
Match: gi|778688605|ref|XP_004149788.2| (PREDICTED: kirola-like [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 5.9e-58
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           MS+ DSIVAKVELKS IEKFYGFFRNH+ DL+NLFP+LYQ I LVEG++LSAGSVILFKY
Sbjct: 1   MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVILFKY 60

Query: 61  HLG-HELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFA 120
           HLG  ++VSEKW +R VDDAKK IIYEA+EGD+QKYYKVLRAK E + G  SK+ RGSFA
Sbjct: 61  HLGADQVVSEKWLIRAVDDAKKCIIYEAIEGDLQKYYKVLRAKLEVVHGRSSKIGRGSFA 120

Query: 121 KWTVEYEKAYENVSSPASHMELFLKISKGVDAY 152
           KWT+E+EKA ENV SP SHME+F+KISKGVDAY
Sbjct: 121 KWTIEFEKANENVPSPDSHMEIFVKISKGVDAY 153

[Close]

BLAST of ClCG05G011060.1 vs. NCBI nr
Match: gi|477504344|dbj|BAN14689.1| (major latex-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 8.0e-55
Identity = 109/155 (70.32%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE YQSI LVEG+H S+GSV+ FK+
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             G EL +EKW++RVVDD KKYIIYEAVEGD  K +KVLRAKFE ++GGLSKV RG+F K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLSN 155
           WTVE+EKA +NV+SP +++ELF+KISKGVDAY SN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSN 155

[Close]

BLAST of ClCG05G011060.1 vs. NCBI nr
Match: gi|477504342|dbj|BAN14688.1| (major latex-like protein [Cucurbita pepo subsp. ovifera])

HSP 1 Score: 219.5 bits (558), Expect = 4.0e-54
Identity = 108/154 (70.13%), Postives = 129/154 (83.77%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE YQSI LVEG+H S+GSV+ FK+
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             G EL +EKW++RVVDD KKYIIYEAVEGD  K +KVLRAKFE ++GGLSKV RG+F K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLS 154
           WTVE+EKA +NV+SP +++ELF+KISKGVDAY S
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFS 154

[Close]

BLAST of ClCG05G011060.1 vs. NCBI nr
Match: gi|477504346|dbj|BAN14690.1| (major latex-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-47
Identity = 98/155 (63.23%), Postives = 119/155 (76.77%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE + SI LVEG+H   GS++L KY
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPENFNSIQLVEGQHFDRGSLVLSKY 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             GHE   EKW +R VDD KKYI+YEAVEG+  K +KVLRAK EA+ GG +KV  G+F K
Sbjct: 61  EFGHEHRVEKWVIRAVDDVKKYIVYEAVEGEALKQFKVLRAKVEAVHGGSTKVGGGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLSN 155
            T+E+EKA ENV+SP  ++ELF+KI+KGVDAY SN
Sbjct: 121 LTIEFEKANENVASPEIYLELFVKIAKGVDAYFSN 155

The following BLAST results are available for this feature:

BLAST of ClCG05G011060.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KIRO_ACTDE	1.4e-11	31.03	Kirola OS=Actinidia deliciosa PE=1 SV=1	[more]
MLP22_PAPSO	1.9e-08	28.67	Major latex protein 22 OS=Papaver somniferum GN=MLP22 PE=2 SV=1	[more]

BLAST of ClCG05G011060.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAY7_CUCSA	4.1e-58	76.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342350 PE=4 SV=1	[more]
N0DK19_CUCPE	5.6e-55	70.32	Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1	[more]
N0DKL1_CUCPE	2.8e-54	70.13	Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1	[more]
N0DK07_CUCPE	3.3e-47	63.23	Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR3 PE=2 SV=1	[more]
A0A0A0LA34_CUCSA	2.8e-46	60.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1	[more]

BLAST of ClCG05G011060.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28010.1	2.8e-13	29.87	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT5G28000.1	8.9e-12	28.38	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

BLAST of ClCG05G011060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202699\|gb\|KGN57832.1\|	5.9e-58	76.47	hypothetical protein Csa_3G342350 [Cucumis sativus]	[more]
gi\|778688605\|ref\|XP_004149788.2\|	5.9e-58	76.47	PREDICTED: kirola-like [Cucumis sativus]	[more]
gi\|477504344\|dbj\|BAN14689.1\|	8.0e-55	70.32	major latex-like protein [Cucurbita pepo subsp. pepo]	[more]
gi\|477504342\|dbj\|BAN14688.1\|	4.0e-54	70.13	major latex-like protein [Cucurbita pepo subsp. ovifera]	[more]
gi\|477504346\|dbj\|BAN14690.1\|	4.7e-47	63.23	major latex-like protein [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000916	Bet_v_I/MLP
IPR023393	START-like_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0006952	defense response
GO:0009607	response to biotic stimulus

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G011060	ClCG05G011060	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G011060.1	ClCG05G011060.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G011060.1.cds1	ClCG05G011060.1.cds1	CDS
ClCG05G011060.1.cds2	ClCG05G011060.1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 5..153 score: 1.0
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 2..155 score: 6.6
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 1..153 score: 9.6
None	No IPR available	PANTHER	PTHR31907	FAMILY NOT NAMED	coord: 2..152 score: 3.1
None	No IPR available	PANTHER	PTHR31907:SF2	SUBFAMILY NOT NAMED	coord: 2..152 score: 3.1
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 69..153 score: 1.14E-21coord: 1..35 score: 1.14