ClCG05G011060 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G011060
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Major latex-like protein
Location	CG_Chr05 : 12896601 .. 12898261 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCAAATTGATAGCATTGTGGCAAAGGTTGAGCTAAAATCTCCTATAGAGAAGTTCTATGGCTTCTTCAGAAACCATTTAGGAGATTTGATCAATCTATTTCCTGAACTGTACCAGAGCATTCACCTTGTAGAAGGAGAACATCTCTCTGCTGGTTCTGTTATACTATTTAAATATCATCTTGGTGAGAGATTACTTCTTCTCTTTTATTCTTCTCCCAATTAATACATTTAAATTCCACATAATGTTCCATTTCATGTAGCTATTTTTTCGTTCATACTATTAAAACATAACTATTTTGGTCTATGTGAGTTGTTCTAATGGTAAATAAGGGACAACATGAATTTCATCGAGAGCTAAGAGTGAATTGGTTCAATCTATGGCGTAGTCAACTACCTACTTTATTCACATATCTAACTATCATGAGTTTGTTTTAATGATATGTATATGTAATTTTTAAGAGAGTGAGAAATGAAAAATGAACAAGAGTGAATATTATCCAACACAGGCATTTTCTTTTCAAAATTAAGGTTGAAACAAACAAAAGCACACGATAATCTAGCCAATGGGAGAAAACAATCAAAATATATATTCAACAAAGTGATATAGTATACTCATTTTTGGTGACTCCATATCTCATGTAATTGTGGAAAATATATCAGAAAAAAATTGAAAGAAACCATTTTAAATATAAACAAAAAGTAGAAAATTATTAGTTGACCAATGATTACTGCATCAAACGATCGTCAACCAACATTTATTTACTGAGATTGATGTATTTATAGTAAATTAATGGCAGTTAAATTATAGGTATAATTATTAGTAGGTTTTTAAAACTTTAAATTTTATATATAATATCAGACCCAAGACTTTCAATTTGAAGTATAATATATATATATATATATATATATTAAATTAGTTCGTCCATTAGTTATGATTTATGGAACTTTGAACGTTTAGTTTTGTGCACGGAAGGCTCAGATCCTCTAACCTTTTTCTACTTTCTCTTTTGTATAGAATTGATCTCTAGCTCTTCTTGTACATATTGAACTTATAGTTTCGGAATATGATAAAAGTGTTAAGGATGTGTCAACTTAAGAATGTGTCAACTTAATTGAGATATTCTAGTGTATATCCTAATCTTTCTTTATTCTAGTATCTTTATTCTAGTATCTTGTTCTAAAAAAAAAAAAATTGTGCCTAATAAAATCCATGAATTTGAAAAAATTTGACAAAAAGCTGAACTAATTTGTAATTTTAAAAATTTGGTTGAGAGATCAAATAGACATAAACCTCAACGTTCTAAGAAAATTTGTAATTTAACGTTGATCTCTTTTTATTTATTTATTTATTTATTTATTTAACGATGAGAAACAGGACATGAACTTGTATCCGAAAAATGGTCAATGAGAGTTGTGGATGATGCAAAAAAATATATAATCTATGAAGCTGTTGAAGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGTTTGAAGCTATTGATGGAGGCTTAAGCAAAGTAAGAGGAAGCTTTGCAAAATGGACTGTTGAGTATGAAAAGGCTTATGAAAATGTGTCTTCACCAGCAAGCCACATGGAATTGTTTCTCAAAATTTCAAAAGGCGTCGATGCTTATCTTTCCAACTACTAA

mRNA sequence

ATGAGCCAAATTGATAGCATTGTGGCAAAGGTTGAGCTAAAATCTCCTATAGAGAAGTTCTATGGCTTCTTCAGAAACCATTTAGGAGATTTGATCAATCTATTTCCTGAACTGTACCAGAGCATTCACCTTGTAGAAGGAGAACATCTCTCTGCTGGTTCTGTTATACTATTTAAATATCATCTTGGACATGAACTTGTATCCGAAAAATGGTCAATGAGAGTTGTGGATGATGCAAAAAAATATATAATCTATGAAGCTGTTGAAGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGTTTGAAGCTATTGATGGAGGCTTAAGCAAAGTAAGAGGAAGCTTTGCAAAATGGACTGTTGAGTATGAAAAGGCTTATGAAAATGTGTCTTCACCAGCAAGCCACATGGAATTGTTTCTCAAAATTTCAAAAGGCGTCGATGCTTATCTTTCCAACTACTAA

Coding sequence (CDS)

ATGAGCCAAATTGATAGCATTGTGGCAAAGGTTGAGCTAAAATCTCCTATAGAGAAGTTCTATGGCTTCTTCAGAAACCATTTAGGAGATTTGATCAATCTATTTCCTGAACTGTACCAGAGCATTCACCTTGTAGAAGGAGAACATCTCTCTGCTGGTTCTGTTATACTATTTAAATATCATCTTGGACATGAACTTGTATCCGAAAAATGGTCAATGAGAGTTGTGGATGATGCAAAAAAATATATAATCTATGAAGCTGTTGAAGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGTTTGAAGCTATTGATGGAGGCTTAAGCAAAGTAAGAGGAAGCTTTGCAAAATGGACTGTTGAGTATGAAAAGGCTTATGAAAATGTGTCTTCACCAGCAAGCCACATGGAATTGTTTCTCAAAATTTCAAAAGGCGTCGATGCTTATCTTTCCAACTACTAA

Protein sequence

MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKYHLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKVRGSFAKWTVEYEKAYENVSSPASHMELFLKISKGVDAYLSNY

Homology

[Close]

BLAST of ClCG05G011060 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 45/145 (31.03%), Postives = 71/145 (48.97%), Query Frame = 1


Query: 7   IVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKYHLGHEL 66
           +V +VE+ S    FY  FR  L  +  + P   Q + L+EG   + GSVI FKY +  + 
Sbjct: 7   MVKQVEILSDGIVFYEIFRYRLYLISEMSPVNIQGVDLLEGNWGTVGSVIFFKYTIDGKE 66

Query: 67  VSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKVRGSFAKWTVEYEK 126
            + K  +  +D+  K + ++ VEGD+ + YK     F  I    +K   +   WT  YEK
Sbjct: 67  KTAKDIVEAIDEETKSVTFKIVEGDLMELYKT----FIIIVQVDTKGEHNSVTWTFHYEK 126

Query: 127 AYENVSSPASHMELFLKISKGVDAY 152
             E+V  P + M   ++I+K ++ Y
Sbjct: 127 LKEDVEEPNTLMNFCIEITKDIETY 147

[Close]

BLAST of ClCG05G011060 vs. Swiss-Prot
Match: MLP22_PAPSO (Major latex protein 22 OS=Papaver somniferum GN=MLP22 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 43/150 (28.67%), Postives = 77/150 (51.33%), Query Frame = 1


Query: 4   IDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKYHLG 63
           +  +V ++E+    +++Y  F++H  DL N  P +Y+ +  VEG+ +++G +  + Y + 
Sbjct: 12  VGKLVTELEVNCNADEYYKIFKHH-EDLPNAIPHIYRGVKAVEGDRITSGFIKEWHYIIE 71

Query: 64  HELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEA-IDGGLSKVRGSFAKWTV 123
            + ++ K      D+A+  I +  VEG +   YK    KF+A +    +   GS   W V
Sbjct: 72  GKPLTCKERTTYEDEART-IHHSTVEGVLLDDYK----KFDATLVNPKADGHGSIVTWIV 131

Query: 124 EYEKAYENVSSPASHMELFLKISKGVDAYL 153
           EYEK  E+   P S++  F KI + ++ YL
Sbjct: 132 EYEKINEDSPVPISYL-TFHKIIEDLNTYL 154

[Close]

BLAST of ClCG05G011060 vs. TrEMBL
Match: A0A0A0LAY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342350 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.1e-58
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           MS+ DSIVAKVELKS IEKFYGFFRNH+ DL+NLFP+LYQ I LVEG++LSAGSVILFKY
Sbjct: 1   MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVILFKY 60

Query: 61  HLG-HELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFA 120
           HLG  ++VSEKW +R VDDAKK IIYEA+EGD+QKYYKVLRAK E + G  SK+ RGSFA
Sbjct: 61  HLGADQVVSEKWLIRAVDDAKKCIIYEAIEGDLQKYYKVLRAKLEVVHGRSSKIGRGSFA 120

Query: 121 KWTVEYEKAYENVSSPASHMELFLKISKGVDAY 152
           KWT+E+EKA ENV SP SHME+F+KISKGVDAY
Sbjct: 121 KWTIEFEKANENVPSPDSHMEIFVKISKGVDAY 153

[Close]

BLAST of ClCG05G011060 vs. TrEMBL
Match: N0DK19_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-55
Identity = 109/155 (70.32%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE YQSI LVEG+H S+GSV+ FK+
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             G EL +EKW++RVVDD KKYIIYEAVEGD  K +KVLRAKFE ++GGLSKV RG+F K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLSN 155
           WTVE+EKA +NV+SP +++ELF+KISKGVDAY SN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSN 155

[Close]

BLAST of ClCG05G011060 vs. TrEMBL
Match: N0DKL1_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.8e-54
Identity = 108/154 (70.13%), Postives = 129/154 (83.77%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE YQSI LVEG+H S+GSV+ FK+
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             G EL +EKW++RVVDD KKYIIYEAVEGD  K +KVLRAKFE ++GGLSKV RG+F K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLS 154
           WTVE+EKA +NV+SP +++ELF+KISKGVDAY S
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFS 154

[Close]

BLAST of ClCG05G011060 vs. TrEMBL
Match: N0DK07_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR3 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-47
Identity = 98/155 (63.23%), Postives = 119/155 (76.77%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE + SI LVEG+H   GS++L KY
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPENFNSIQLVEGQHFDRGSLVLSKY 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             GHE   EKW +R VDD KKYI+YEAVEG+  K +KVLRAK EA+ GG +KV  G+F K
Sbjct: 61  EFGHEHRVEKWVIRAVDDVKKYIVYEAVEGEALKQFKVLRAKVEAVHGGSTKVGGGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLSN 155
            T+E+EKA ENV+SP  ++ELF+KI+KGVDAY SN
Sbjct: 121 LTIEFEKANENVASPEIYLELFVKIAKGVDAYFSN 155

[Close]

BLAST of ClCG05G011060 vs. TrEMBL
Match: A0A0A0LA34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-46
Identity = 92/152 (60.53%), Postives = 122/152 (80.26%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           MSQ +SI AKV LKSP EKFYGFFRNH+GDL+++FP+ +QS   +EGE  + GSV+ ++Y
Sbjct: 1   MSQTESIWAKVPLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQY 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKVRGSFAKW 120
           HLG    + K  MRVVDD KK I+YE ++GD+ K+YKV RAK EA++GGL+KV G+FAKW
Sbjct: 61  HLGSPAAA-KIKMRVVDDVKKSIVYEFMDGDVLKHYKVFRAKLEAVNGGLNKVGGNFAKW 120

Query: 121 TVEYEKAYENVSSPASHMELFLKISKGVDAYL 153
           T+EY+KA ENV SP ++MEL +K+SKG+DAY+
Sbjct: 121 TIEYQKANENVPSPETYMELAVKVSKGLDAYI 151

[Close]

BLAST of ClCG05G011060 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-13
Identity = 46/154 (29.87%), Postives = 77/154 (50.00%), Query Frame = 1


Query: 2   SQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY- 61
           S +  +  +VE+K+P   FY  +      +    P   QS  L +GE  + GS++ + Y 
Sbjct: 14  SLLGKLEVEVEIKAPAAIFYHIYAGRPHHVAKATPRNVQSCDLHDGEWGTVGSIVYWNYV 73

Query: 62  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYK--VLRAKFEAIDGGLSKVRGSFA 121
           H G   V+++  + +V+  KK I +  +EGD+   YK  ++  +    +GG     GS  
Sbjct: 74  HEGQAKVAKE-RIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGG----TGSVV 133

Query: 122 KWTVEYEKAYENVSSPASHMELFLKISKGVDAYL 153
           KW +EYEK  ENV  P + +  F +++K +D +L
Sbjct: 134 KWHIEYEKIDENVPHPENLLPFFAEMTKEIDEHL 162

[Close]

BLAST of ClCG05G011060 vs. TAIR10
Match: AT5G28000.1 (AT5G28000.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 8.9e-12
Identity = 42/148 (28.38%), Postives = 70/148 (47.30%), Query Frame = 1


Query: 7   IVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKYHLGHEL 66
           +  +V++KSP EKFY  +      +        Q+  L+EGE  +  S++ + Y    + 
Sbjct: 17  VEVEVDIKSPAEKFYQVYVGRPDHVAKATSSKVQACDLLEGEWGTISSIVNWNYVYAGKA 76

Query: 67  VSEKWSMRVVDDAKKYIIYEAVEGDMQKYYK--VLRAKFEAIDGGLSKVRGSFAKWTVEY 126
              K  + +V+  KK I +  +EGD+   YK   +       +GG+    GS AKW +EY
Sbjct: 77  KVAKERIELVEPEKKLIKFRVIEGDVLAVYKNFFITISVTPKEGGV----GSVAKWHLEY 136

Query: 127 EKAYENVSSPASHMELFLKISKGVDAYL 153
           EK   NV  P + +    +++K +D +L
Sbjct: 137 EKNDVNVPDPENFLPFLAEMTKEIDEHL 160

[Close]

BLAST of ClCG05G011060 vs. NCBI nr
Match: gi|700202699|gb|KGN57832.1| (hypothetical protein Csa_3G342350 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 5.9e-58
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           MS+ DSIVAKVELKS IEKFYGFFRNH+ DL+NLFP+LYQ I LVEG++LSAGSVILFKY
Sbjct: 1   MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVILFKY 60

Query: 61  HLG-HELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFA 120
           HLG  ++VSEKW +R VDDAKK IIYEA+EGD+QKYYKVLRAK E + G  SK+ RGSFA
Sbjct: 61  HLGADQVVSEKWLIRAVDDAKKCIIYEAIEGDLQKYYKVLRAKLEVVHGRSSKIGRGSFA 120

Query: 121 KWTVEYEKAYENVSSPASHMELFLKISKGVDAY 152
           KWT+E+EKA ENV SP SHME+F+KISKGVDAY
Sbjct: 121 KWTIEFEKANENVPSPDSHMEIFVKISKGVDAY 153

[Close]

BLAST of ClCG05G011060 vs. NCBI nr
Match: gi|778688605|ref|XP_004149788.2| (PREDICTED: kirola-like [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 5.9e-58
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           MS+ DSIVAKVELKS IEKFYGFFRNH+ DL+NLFP+LYQ I LVEG++LSAGSVILFKY
Sbjct: 1   MSRSDSIVAKVELKSNIEKFYGFFRNHVEDLMNLFPDLYQGIDLVEGQYLSAGSVILFKY 60

Query: 61  HLG-HELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFA 120
           HLG  ++VSEKW +R VDDAKK IIYEA+EGD+QKYYKVLRAK E + G  SK+ RGSFA
Sbjct: 61  HLGADQVVSEKWLIRAVDDAKKCIIYEAIEGDLQKYYKVLRAKLEVVHGRSSKIGRGSFA 120

Query: 121 KWTVEYEKAYENVSSPASHMELFLKISKGVDAY 152
           KWT+E+EKA ENV SP SHME+F+KISKGVDAY
Sbjct: 121 KWTIEFEKANENVPSPDSHMEIFVKISKGVDAY 153

[Close]

BLAST of ClCG05G011060 vs. NCBI nr
Match: gi|477504344|dbj|BAN14689.1| (major latex-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 8.0e-55
Identity = 109/155 (70.32%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE YQSI LVEG+H S+GSV+ FK+
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             G EL +EKW++RVVDD KKYIIYEAVEGD  K +KVLRAKFE ++GGLSKV RG+F K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLSN 155
           WTVE+EKA +NV+SP +++ELF+KISKGVDAY SN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSN 155

[Close]

BLAST of ClCG05G011060 vs. NCBI nr
Match: gi|477504342|dbj|BAN14688.1| (major latex-like protein [Cucurbita pepo subsp. ovifera])

HSP 1 Score: 219.5 bits (558), Expect = 4.0e-54
Identity = 108/154 (70.13%), Postives = 129/154 (83.77%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE YQSI LVEG+H S+GSV+ FK+
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             G EL +EKW++RVVDD KKYIIYEAVEGD  K +KVLRAKFE ++GGLSKV RG+F K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLS 154
           WTVE+EKA +NV+SP +++ELF+KISKGVDAY S
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFS 154

[Close]

BLAST of ClCG05G011060 vs. NCBI nr
Match: gi|477504346|dbj|BAN14690.1| (major latex-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-47
Identity = 98/155 (63.23%), Postives = 119/155 (76.77%), Query Frame = 1


Query: 1   MSQIDSIVAKVELKSPIEKFYGFFRNHLGDLINLFPELYQSIHLVEGEHLSAGSVILFKY 60
           M Q DSI  KV+LKS  EK YGFFRNHLGDL++LFPE + SI LVEG+H   GS++L KY
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPENFNSIQLVEGQHFDRGSLVLSKY 60

Query: 61  HLGHELVSEKWSMRVVDDAKKYIIYEAVEGDMQKYYKVLRAKFEAIDGGLSKV-RGSFAK 120
             GHE   EKW +R VDD KKYI+YEAVEG+  K +KVLRAK EA+ GG +KV  G+F K
Sbjct: 61  EFGHEHRVEKWVIRAVDDVKKYIVYEAVEGEALKQFKVLRAKVEAVHGGSTKVGGGNFTK 120

Query: 121 WTVEYEKAYENVSSPASHMELFLKISKGVDAYLSN 155
            T+E+EKA ENV+SP  ++ELF+KI+KGVDAY SN
Sbjct: 121 LTIEFEKANENVASPEIYLELFVKIAKGVDAYFSN 155

The following BLAST results are available for this feature:

BLAST of ClCG05G011060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KIRO_ACTDE	1.4e-11	31.03	Kirola OS=Actinidia deliciosa PE=1 SV=1	[more]
MLP22_PAPSO	1.9e-08	28.67	Major latex protein 22 OS=Papaver somniferum GN=MLP22 PE=2 SV=1	[more]

BLAST of ClCG05G011060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAY7_CUCSA	4.1e-58	76.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342350 PE=4 SV=1	[more]
N0DK19_CUCPE	5.6e-55	70.32	Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1	[more]
N0DKL1_CUCPE	2.8e-54	70.13	Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1	[more]
N0DK07_CUCPE	3.3e-47	63.23	Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR3 PE=2 SV=1	[more]
A0A0A0LA34_CUCSA	2.8e-46	60.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1	[more]

BLAST of ClCG05G011060 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28010.1	2.8e-13	29.87	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT5G28000.1	8.9e-12	28.38	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

BLAST of ClCG05G011060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202699\|gb\|KGN57832.1\|	5.9e-58	76.47	hypothetical protein Csa_3G342350 [Cucumis sativus]	[more]
gi\|778688605\|ref\|XP_004149788.2\|	5.9e-58	76.47	PREDICTED: kirola-like [Cucumis sativus]	[more]
gi\|477504344\|dbj\|BAN14689.1\|	8.0e-55	70.32	major latex-like protein [Cucurbita pepo subsp. pepo]	[more]
gi\|477504342\|dbj\|BAN14688.1\|	4.0e-54	70.13	major latex-like protein [Cucurbita pepo subsp. ovifera]	[more]
gi\|477504346\|dbj\|BAN14690.1\|	4.7e-47	63.23	major latex-like protein [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000916	Bet_v_I/MLP
IPR023393	START-like_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0006952	defense response
GO:0009607	response to biotic stimulus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G011060.1	ClCG05G011060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 5..153 score: 1.0
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 2..155 score: 6.6
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 1..153 score: 9.6
None	No IPR available	PANTHER	PTHR31907	FAMILY NOT NAMED	coord: 2..152 score: 3.1
None	No IPR available	PANTHER	PTHR31907:SF2	SUBFAMILY NOT NAMED	coord: 2..152 score: 3.1
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 69..153 score: 1.14E-21coord: 1..35 score: 1.14

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G011060	Cucsa.012500	Cucumber (Gy14) v1	cgywcgB345
ClCG05G011060	MELO3C020268.2	Melon (DHL92) v3.6.1	medwcgB417

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G011060	Wax gourd	wcgwgoB441
ClCG05G011060	Cucumber (Gy14) v1	cgywcgB640
ClCG05G011060	Cucurbita maxima (Rimu)	cmawcgB234
ClCG05G011060	Cucurbita maxima (Rimu)	cmawcgB407
ClCG05G011060	Cucurbita moschata (Rifu)	cmowcgB220
ClCG05G011060	Cucurbita moschata (Rifu)	cmowcgB406
ClCG05G011060	Wild cucumber (PI 183967)	cpiwcgB240
ClCG05G011060	Cucumber (Chinese Long) v2	cuwcgB233
ClCG05G011060	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G011060	Watermelon (97103) v1	wcgwmB286
ClCG05G011060	Cucurbita pepo (Zucchini)	cpewcgB518
ClCG05G011060	Cucurbita pepo (Zucchini)	cpewcgB560
ClCG05G011060	Bottle gourd (USVL1VR-Ls)	lsiwcgB332
ClCG05G011060	Cucumber (Gy14) v2	cgybwcgB217
ClCG05G011060	Silver-seed gourd	carwcgB0497
ClCG05G011060	Silver-seed gourd	carwcgB0739
ClCG05G011060	Cucumber (Chinese Long) v3	cucwcgB241
ClCG05G011060	Watermelon (97103) v2	wcgwmbB229