ClCG05G009350.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCAGAACCGCGAATGCGGCTGATTCCGTCGGCGACGAACCTCTTCCTCCTTTCCAGCGTTCTCCGGCGATAGCCGGGAGAATCTCAGGCTACGTCAGGCCACTACAATGCTGCCGCTCCTCAACGTTCGCCAAGTGCCTTTTTCCCCCTCCTTCTTTCTTTCCTGTTAATACCCGAGGATGTTTTCTCTCTTCCCGATGGAATAACTCATTCTTTCCTCAATCTATGAGTTCAAATGTATCTTTTGCAACAAGTTTTATTTGGTCGGGCATTTCTGAGTCAACTCATATCTCTTGTGTTATCTAATAAACCTTATTAGTAACAAGGAATTTGATATTTCCAATATGAAAAACCTTTTCTGATATCTATTATGATATTCTACAGCAAAGTTACAACTCTGGATGGAACATTTACACCTGCTTTGATAGGTTATGGTAATGCTTGTGGAGCTCAAGAAGAGGGTGTTCAAGCCATGTCTGCCTATCGGACTGGTGCTCAATTGTTTCTAGGGTAATTAATTTTGCTATTCTCTAGTTATTTTATGTTTTTTTAAAGAAAAATTGGGAGCGTCTGGTTTGAAATTATTTATGTTATTAAGCAATACCTTTATCATCTGTTTAAAATTTTAAACGATGAATGATAGAAAATTTGATTATTATCATTTTGTAAAAGTTGTAGGAAGTTGTTCATTGGCTAGTTCTCTTATTTCATGAAATTCCCTTCTACAGGTTGAATCTTGATATTCTCTTAATTGCTCAATGCTTCAACTGGAGAAAGATGGAATTTAGTTTGGATGGTAAATATTTAACAGAACATGGAGTGTGA ACCAGAACCGCGAATGCGGCTGATTCCGTCGGCGACGAACCTCTTCCTCCTTTCCAGCGTTCTCCGGCGATAGCCGGGAGAATCTCAGGCTACGTCAGGCCACTACAATGCTGCCGCTCCTCAACGTTCGCCAAGTGCCTTTTTCCCCCTCCTTCTTTCTTTCCTGTTAATACCCGAGGATGTTTTCTCTCTTCCCGATGGAATAACTCATTCTTTCCTCAATCTATGAGTTCAAATGTATCTTTTGCAACAAGTTTTATTTGGTCGGGCATTTCTGAGTCAACTCATATCTCTTGTGTTATCTAATAAACCTTATTAGTAACAAGGAATTTGATATTTCCAATATGAAAAACCTTTTCTGATATCTATTATGATATTCTACAGCAAAGTTACAACTCTGGATGGAACATTTACACCTGCTTTGATAGGTTATGGTAATGCTTGTGGAGCTCAAGAAGAGGGTGTTCAAGCCATGTCTGCCTATCGGACTGGTGCTCAATTGTTTCTAGGGTTGAATCTTGATATTCTCTTAATTGCTCAATGCTTCAACTGGAGAAAGATGGAATTTAGTTTGGATGGTAAATATTTAACAGAACATGGAGTGTGA ATGATATTCTACAGCAAAGTTACAACTCTGGATGGAACATTTACACCTGCTTTGATAGGTTATGGTAATGCTTGTGGAGCTCAAGAAGAGGGTGTTCAAGCCATGTCTGCCTATCGGACTGGTGCTCAATTGTTTCTAGGGTTGAATCTTGATATTCTCTTAATTGCTCAATGCTTCAACTGGAGAAAGATGGAATTTAGTTTGGATGGTAAATATTTAACAGAACATGGAGTGTGA MIFYSKVTTLDGTFTPALIGYGNACGAQEEGVQAMSAYRTGAQLFLGLNLDILLIAQCFNWRKMEFSLDGKYLTEHGV
BLAST of ClCG05G009350.1 vs. Swiss-Prot
Match: CDC16_ARATH (Anaphase-promoting complex subunit 6 OS=Arabidopsis thaliana GN=APC6 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.6e-11 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. TrEMBL
Match: A0A061F9F4_THECC (Anaphase promoting complex 6 isoform 2 OS=Theobroma cacao GN=TCM_031876 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.9e-11 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. TrEMBL
Match: A0A0A0L2G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G506830 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.9e-11 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. TrEMBL
Match: A0A067K367_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16222 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. TrEMBL
Match: I1LT60_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G156300 PE=4 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 2.7e-10 Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. TrEMBL
Match: A0A0R0HIJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G156300 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.7e-10 Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. TAIR10
Match: AT1G78770.1 (AT1G78770.1 anaphase promoting complex 6) HSP 1 Score: 68.2 bits (165), Expect = 2.6e-12 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. NCBI nr
Match: gi|449457307|ref|XP_004146390.1| (PREDICTED: anaphase-promoting complex subunit 6 [Cucumis sativus]) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-11 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. NCBI nr
Match: gi|700199644|gb|KGN54802.1| (hypothetical protein Csa_4G506830 [Cucumis sativus]) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-11 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. NCBI nr
Match: gi|590610413|ref|XP_007021807.1| (Anaphase promoting complex 6 isoform 2 [Theobroma cacao]) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-11 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. NCBI nr
Match: gi|659082954|ref|XP_008442113.1| (PREDICTED: anaphase-promoting complex subunit 6 isoform X1 [Cucumis melo]) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-11 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 1
BLAST of ClCG05G009350.1 vs. NCBI nr
Match: gi|802659155|ref|XP_012080802.1| (PREDICTED: anaphase-promoting complex subunit 6 [Jatropha curcas]) HSP 1 Score: 73.6 bits (179), Expect = 1.8e-10 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
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