ClCG05G005170.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG05G005170.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRibosomal L18p/L5e family protein LENGTH=311
LocationCG_Chr05 : 4985493 .. 4987314 (-)
Sequence length813
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAAAAAGGAAAGTTGAAGACGAACTTGGATCAAACAAATCAACCCAGGTCACAAGTTCAGGTACTATTCTAGCAATTGATACATTTATAAGTTTCACTTTTATGTCAATTTCAATTACACAAAGTTCAATAGTTCAAGTTTGTAGTATCAATTGATCAATGGACACCAATAGTTTGATGATTTGCCCCTATGAGTCGTTTCTTCACTGCACTTTTTTTTTTTTTTTGTGTGTCTCTTGGACATTCCATATTGACTTAGATGTGCGATTAAGAATAGATTTCAAAGTGGCTTCCTGTTCTTTGGATAGATCATTCAATAAAATTACAAATGGTTCATCCAGGCCTTAGATATCTCCATTATTCATTACTGGTGAACCCCATTCAGTTGCTTATAATGTTGAATTTGAAGGTAGAATGATCATCACTCAGCTGATCATTATGATTTAGATTTTCATGATATTCACAACATGATAGTATATTCAATAAGCTCACAAATACATGGATATCTTTTCGATAAGCTCGATCGAGGTTCCCAGAGTTAGAAGAGAGTATAATTTGATACTCATGGGAATAAAAAATCCAAAAAAAAAAAAAAAAAAAAAGGAAAATCTACAGCAAAATAGTAGCTAAATCAATGATAAACCTAACTAGTGTTTGGTAAATGGCCTTGTACAGCTATAGTTGAACATGTGAACACCAAATTTGTAAATTTGTAAATTTGTTATAGATGAAAAAGAGAAACATGATGTTAAGAAGAAGCTCGGGACACCCATGTTTAATCAGCTTATTAGTCCTTGCCATGAGCCATTATGTTATGGGTATAGTCATGGTGTTATAGGGTTTGAAAGCATGGTGCGAAATTTTTCACACAGGTCAATACAAGGCTAGCTTTATATTTGACCAACTTTATATTGGATCCAAGTTTCTACCAAAGGTGGCATGAATGCCTCCCAAGTTCCCTATGAGGCCGATGCCTTTGCTCATTCAATAAAGGGTTAAAACCACTTTTACAAAGTTGGAGCTAGAAGCTCTTTTACAAAACAAGGCTCTTTTAGAGAATACCTCAGTTTAAGTAGAGAATTCTCACAATTCTCACACAATGAAATAGCTTTTGTGTGGTGCCTCATACACACATCTTAGCACGATTGTTGCAAGACTCCATCAACCATGCCAATGCTCAAGAACTAAGGTCGTGACACGTGGCTTGCCACGTGACCTAACCATCAAAAGGCGTATGTCTCGAGCCCCATTGGAGCACACTGAGATTAAGGGGAAGCAACACCAAGGTCGTTCTCGACTTGAACCAAATCTCCAAATAGCCGACCCATCCAAGCATAGGAGACAATTGAACAGAATGAGGGATCTAACACGTACTCCTCTATAAAAGGCAGAGAATTTTTTCACGAAGCCCAAAAGTATGCATTTTTTAACTTGAACTTTGCCAAGCACCACACCTGTGCAAGGTTGTGTTGTGACAAGTCAAAGATCATTTGCTGACCAGGATCCATCTTAGATGCCACATCAGCAGCCCACATAGTCTAAATTTGTGCATCTAACACATTATATCACACATGTTATTCACTGAGTAACGATTAAGATTGTCGCTGTGGTACATTCAATTTCTAAGCATATGAAATCTGACATGACATCAAGAAAGATATCCTCTATCTATACGGCTGTTTTGGCTCAGGGAGCATTGGCTGATGATATCCACAATTCAGTCTACCATTGATACAATAATGGAGTTATTCTGAAGGTAAAACCAAGCAGCAAGATAGACCCAGGAAAGCTGGAAGATCATAAAGTTGCCATTTGA

mRNA sequence

ATGGGAGGAAAAAGGAAAGTTGAAGACGAACTTGGATCAAACAAATCAACCCAGGTCACAAGTTCAGATCATTCAATAAAATTACAAATGGTTCATCCAGGCCTTAGATATCTCCATTATTCATTACTGGTGAACCCCATTCAGTTGCTTATAATGTTGAATTTGAAGAATGATCATCACTCAGCTGATCATTATGATTTAGATTTTCATGATATTCACAACATGATAGTATATTCAATAAGCTCACAAATACATGGATATCTTTTCGATAAGCTCGATCGAGGTTCCCAGAATGAAAAAGAGAAACATGATGTTAAGAAGAAGCTCGGGACACCCATGTTTAATCAGCTTATTAGTCCTTGCCATGAGCCATTATGTTATGGGTATAGTCATGGTGTTATAGGACTCCATCAACCATGCCAATGCTCAAGAACTAAGGTCGTGACACGTGGCTTGCCACGTGACCTAACCATCAAAAGGCGTATGTCTCGAGCCCCATTGGAGCACACTGAGATTAAGGGGAAGCAACACCAAGGTCGTTCTCGACTTGAACCAAATCTCCAAATAGCCGACCCATCCAAGCATAGGAGACAATTGAACAGAATGAGGGATCTAACACTAACGATTAAGATTGTCGCTGTGGTACATTCAATTTCTAAGCATATGAAATCTGACATGACATCAAGAAAGATATCCTCTATCTATACGGCTGTTTTGGCTCAGGGAGCATTGGCTGATGATATCCACAATTCAGTAAAACCAAGCAGCAAGATAGACCCAGGAAAGCTGGAAGATCATAAAGTTGCCATTTGA

Coding sequence (CDS)

ATGGGAGGAAAAAGGAAAGTTGAAGACGAACTTGGATCAAACAAATCAACCCAGGTCACAAGTTCAGATCATTCAATAAAATTACAAATGGTTCATCCAGGCCTTAGATATCTCCATTATTCATTACTGGTGAACCCCATTCAGTTGCTTATAATGTTGAATTTGAAGAATGATCATCACTCAGCTGATCATTATGATTTAGATTTTCATGATATTCACAACATGATAGTATATTCAATAAGCTCACAAATACATGGATATCTTTTCGATAAGCTCGATCGAGGTTCCCAGAATGAAAAAGAGAAACATGATGTTAAGAAGAAGCTCGGGACACCCATGTTTAATCAGCTTATTAGTCCTTGCCATGAGCCATTATGTTATGGGTATAGTCATGGTGTTATAGGACTCCATCAACCATGCCAATGCTCAAGAACTAAGGTCGTGACACGTGGCTTGCCACGTGACCTAACCATCAAAAGGCGTATGTCTCGAGCCCCATTGGAGCACACTGAGATTAAGGGGAAGCAACACCAAGGTCGTTCTCGACTTGAACCAAATCTCCAAATAGCCGACCCATCCAAGCATAGGAGACAATTGAACAGAATGAGGGATCTAACACTAACGATTAAGATTGTCGCTGTGGTACATTCAATTTCTAAGCATATGAAATCTGACATGACATCAAGAAAGATATCCTCTATCTATACGGCTGTTTTGGCTCAGGGAGCATTGGCTGATGATATCCACAATTCAGTAAAACCAAGCAGCAAGATAGACCCAGGAAAGCTGGAAGATCATAAAGTTGCCATTTGA

Protein sequence

MGGKRKVEDELGSNKSTQVTSSDHSIKLQMVHPGLRYLHYSLLVNPIQLLIMLNLKNDHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQNEKEKHDVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRDLTLTIKIVAVVHSISKHMKSDMTSRKISSIYTAVLAQGALADDIHNSVKPSSKIDPGKLEDHKVAI
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG05G005170ClCG05G005170gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG05G005170.1ClCG05G005170.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G005170.1.cds7ClCG05G005170.1.cds7CDS
ClCG05G005170.1.cds6ClCG05G005170.1.cds6CDS
ClCG05G005170.1.cds5ClCG05G005170.1.cds5CDS
ClCG05G005170.1.cds4ClCG05G005170.1.cds4CDS
ClCG05G005170.1.cds3ClCG05G005170.1.cds3CDS
ClCG05G005170.1.cds2ClCG05G005170.1.cds2CDS
ClCG05G005170.1.cds1ClCG05G005170.1.cds1CDS