ClCG05G005170 (gene) Watermelon (Charleston Gray)

NameClCG05G005170
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRibosomal L18p/L5e family protein LENGTH=311
LocationCG_Chr05 : 4985493 .. 4987314 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAAAAAGGAAAGTTGAAGACGAACTTGGATCAAACAAATCAACCCAGGTCACAAGTTCAGGTACTATTCTAGCAATTGATACATTTATAAGTTTCACTTTTATGTCAATTTCAATTACACAAAGTTCAATAGTTCAAGTTTGTAGTATCAATTGATCAATGGACACCAATAGTTTGATGATTTGCCCCTATGAGTCGTTTCTTCACTGCACTTTTTTTTTTTTTTTGTGTGTCTCTTGGACATTCCATATTGACTTAGATGTGCGATTAAGAATAGATTTCAAAGTGGCTTCCTGTTCTTTGGATAGATCATTCAATAAAATTACAAATGGTTCATCCAGGCCTTAGATATCTCCATTATTCATTACTGGTGAACCCCATTCAGTTGCTTATAATGTTGAATTTGAAGGTAGAATGATCATCACTCAGCTGATCATTATGATTTAGATTTTCATGATATTCACAACATGATAGTATATTCAATAAGCTCACAAATACATGGATATCTTTTCGATAAGCTCGATCGAGGTTCCCAGAGTTAGAAGAGAGTATAATTTGATACTCATGGGAATAAAAAATCCAAAAAAAAAAAAAAAAAAAAAGGAAAATCTACAGCAAAATAGTAGCTAAATCAATGATAAACCTAACTAGTGTTTGGTAAATGGCCTTGTACAGCTATAGTTGAACATGTGAACACCAAATTTGTAAATTTGTAAATTTGTTATAGATGAAAAAGAGAAACATGATGTTAAGAAGAAGCTCGGGACACCCATGTTTAATCAGCTTATTAGTCCTTGCCATGAGCCATTATGTTATGGGTATAGTCATGGTGTTATAGGGTTTGAAAGCATGGTGCGAAATTTTTCACACAGGTCAATACAAGGCTAGCTTTATATTTGACCAACTTTATATTGGATCCAAGTTTCTACCAAAGGTGGCATGAATGCCTCCCAAGTTCCCTATGAGGCCGATGCCTTTGCTCATTCAATAAAGGGTTAAAACCACTTTTACAAAGTTGGAGCTAGAAGCTCTTTTACAAAACAAGGCTCTTTTAGAGAATACCTCAGTTTAAGTAGAGAATTCTCACAATTCTCACACAATGAAATAGCTTTTGTGTGGTGCCTCATACACACATCTTAGCACGATTGTTGCAAGACTCCATCAACCATGCCAATGCTCAAGAACTAAGGTCGTGACACGTGGCTTGCCACGTGACCTAACCATCAAAAGGCGTATGTCTCGAGCCCCATTGGAGCACACTGAGATTAAGGGGAAGCAACACCAAGGTCGTTCTCGACTTGAACCAAATCTCCAAATAGCCGACCCATCCAAGCATAGGAGACAATTGAACAGAATGAGGGATCTAACACGTACTCCTCTATAAAAGGCAGAGAATTTTTTCACGAAGCCCAAAAGTATGCATTTTTTAACTTGAACTTTGCCAAGCACCACACCTGTGCAAGGTTGTGTTGTGACAAGTCAAAGATCATTTGCTGACCAGGATCCATCTTAGATGCCACATCAGCAGCCCACATAGTCTAAATTTGTGCATCTAACACATTATATCACACATGTTATTCACTGAGTAACGATTAAGATTGTCGCTGTGGTACATTCAATTTCTAAGCATATGAAATCTGACATGACATCAAGAAAGATATCCTCTATCTATACGGCTGTTTTGGCTCAGGGAGCATTGGCTGATGATATCCACAATTCAGTCTACCATTGATACAATAATGGAGTTATTCTGAAGGTAAAACCAAGCAGCAAGATAGACCCAGGAAAGCTGGAAGATCATAAAGTTGCCATTTGA

mRNA sequence

ATGGGAGGAAAAAGGAAAGTTGAAGACGAACTTGGATCAAACAAATCAACCCAGGTCACAAGTTCAGATCATTCAATAAAATTACAAATGGTTCATCCAGGCCTTAGATATCTCCATTATTCATTACTGGTGAACCCCATTCAGTTGCTTATAATGTTGAATTTGAAGAATGATCATCACTCAGCTGATCATTATGATTTAGATTTTCATGATATTCACAACATGATAGTATATTCAATAAGCTCACAAATACATGGATATCTTTTCGATAAGCTCGATCGAGGTTCCCAGAATGAAAAAGAGAAACATGATGTTAAGAAGAAGCTCGGGACACCCATGTTTAATCAGCTTATTAGTCCTTGCCATGAGCCATTATGTTATGGGTATAGTCATGGTGTTATAGGACTCCATCAACCATGCCAATGCTCAAGAACTAAGGTCGTGACACGTGGCTTGCCACGTGACCTAACCATCAAAAGGCGTATGTCTCGAGCCCCATTGGAGCACACTGAGATTAAGGGGAAGCAACACCAAGGTCGTTCTCGACTTGAACCAAATCTCCAAATAGCCGACCCATCCAAGCATAGGAGACAATTGAACAGAATGAGGGATCTAACACTAACGATTAAGATTGTCGCTGTGGTACATTCAATTTCTAAGCATATGAAATCTGACATGACATCAAGAAAGATATCCTCTATCTATACGGCTGTTTTGGCTCAGGGAGCATTGGCTGATGATATCCACAATTCAGTAAAACCAAGCAGCAAGATAGACCCAGGAAAGCTGGAAGATCATAAAGTTGCCATTTGA

Coding sequence (CDS)

ATGGGAGGAAAAAGGAAAGTTGAAGACGAACTTGGATCAAACAAATCAACCCAGGTCACAAGTTCAGATCATTCAATAAAATTACAAATGGTTCATCCAGGCCTTAGATATCTCCATTATTCATTACTGGTGAACCCCATTCAGTTGCTTATAATGTTGAATTTGAAGAATGATCATCACTCAGCTGATCATTATGATTTAGATTTTCATGATATTCACAACATGATAGTATATTCAATAAGCTCACAAATACATGGATATCTTTTCGATAAGCTCGATCGAGGTTCCCAGAATGAAAAAGAGAAACATGATGTTAAGAAGAAGCTCGGGACACCCATGTTTAATCAGCTTATTAGTCCTTGCCATGAGCCATTATGTTATGGGTATAGTCATGGTGTTATAGGACTCCATCAACCATGCCAATGCTCAAGAACTAAGGTCGTGACACGTGGCTTGCCACGTGACCTAACCATCAAAAGGCGTATGTCTCGAGCCCCATTGGAGCACACTGAGATTAAGGGGAAGCAACACCAAGGTCGTTCTCGACTTGAACCAAATCTCCAAATAGCCGACCCATCCAAGCATAGGAGACAATTGAACAGAATGAGGGATCTAACACTAACGATTAAGATTGTCGCTGTGGTACATTCAATTTCTAAGCATATGAAATCTGACATGACATCAAGAAAGATATCCTCTATCTATACGGCTGTTTTGGCTCAGGGAGCATTGGCTGATGATATCCACAATTCAGTAAAACCAAGCAGCAAGATAGACCCAGGAAAGCTGGAAGATCATAAAGTTGCCATTTGA

Protein sequence

MGGKRKVEDELGSNKSTQVTSSDHSIKLQMVHPGLRYLHYSLLVNPIQLLIMLNLKNDHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQNEKEKHDVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRDLTLTIKIVAVVHSISKHMKSDMTSRKISSIYTAVLAQGALADDIHNSVKPSSKIDPGKLEDHKVAI
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G005170.1ClCG05G005170.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G005170Wax gourdwcgwgoB426
ClCG05G005170Watermelon (Charleston Gray)wcgwcgB024
ClCG05G005170Watermelon (Charleston Gray)wcgwcgB160
ClCG05G005170Cucumber (Gy14) v1cgywcgB451
ClCG05G005170Cucurbita maxima (Rimu)cmawcgB233
ClCG05G005170Cucurbita maxima (Rimu)cmawcgB737
ClCG05G005170Cucurbita moschata (Rifu)cmowcgB219
ClCG05G005170Cucurbita moschata (Rifu)cmowcgB743
ClCG05G005170Cucurbita moschata (Rifu)cmowcgB792
ClCG05G005170Wild cucumber (PI 183967)cpiwcgB226
ClCG05G005170Wild cucumber (PI 183967)cpiwcgB588
ClCG05G005170Cucumber (Chinese Long) v2cuwcgB222
ClCG05G005170Cucumber (Chinese Long) v2cuwcgB559
ClCG05G005170Melon (DHL92) v3.5.1mewcgB212
ClCG05G005170Melon (DHL92) v3.5.1mewcgB427
ClCG05G005170Watermelon (97103) v1wcgwmB271
ClCG05G005170Watermelon (97103) v1wcgwmB286
ClCG05G005170Watermelon (97103) v1wcgwmB311
ClCG05G005170Cucurbita pepo (Zucchini)cpewcgB293
ClCG05G005170Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G005170Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G005170Bottle gourd (USVL1VR-Ls)lsiwcgB195
ClCG05G005170Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G005170Cucumber (Gy14) v2cgybwcgB203
ClCG05G005170Cucumber (Gy14) v2cgybwcgB519
ClCG05G005170Melon (DHL92) v3.6.1medwcgB206
ClCG05G005170Melon (DHL92) v3.6.1medwcgB416
ClCG05G005170Silver-seed gourdcarwcgB0072
ClCG05G005170Silver-seed gourdcarwcgB0317
ClCG05G005170Silver-seed gourdcarwcgB0588
ClCG05G005170Silver-seed gourdcarwcgB0821
ClCG05G005170Cucumber (Chinese Long) v3cucwcgB225
ClCG05G005170Cucumber (Chinese Long) v3cucwcgB587
ClCG05G005170Watermelon (97103) v2wcgwmbB229
ClCG05G005170Watermelon (97103) v2wcgwmbB253