ClCG03G017660.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA METLRRHSGAASCRSSTGVGTMETIKEIRSRKERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKIISGF
BLAST of ClCG03G017660.1 vs. TrEMBL
Match: A0A0A0LYX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G561970 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.5e-14 Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TrEMBL
Match: A0A0A0L7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.4e-13 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TrEMBL
Match: A0A072U413_MEDTR (DUF3511 domain protein OS=Medicago truncatula GN=MTR_7g112020 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.2e-12 Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TrEMBL
Match: B9RFH1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1434550 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-12 Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TrEMBL
Match: A0A078G1D4_BRANA (BnaAnng02720D protein OS=Brassica napus GN=BnaAnng02720D PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 7.9e-12 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511)) HSP 1 Score: 73.2 bits (178), Expect = 9.9e-14 Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511)) HSP 1 Score: 58.9 bits (141), Expect = 1.9e-09 Identity = 23/45 (51.11%), Postives = 33/45 (73.33%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511)) HSP 1 Score: 54.7 bits (130), Expect = 3.6e-08 Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511)) HSP 1 Score: 54.3 bits (129), Expect = 4.8e-08 Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. TAIR10
Match: AT3G13910.1 (AT3G13910.1 Protein of unknown function (DUF3511)) HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07 Identity = 24/55 (43.64%), Postives = 37/55 (67.27%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. NCBI nr
Match: gi|700210921|gb|KGN66017.1| (hypothetical protein Csa_1G561970 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 9.3e-14 Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. NCBI nr
Match: gi|659126920|ref|XP_008463430.1| (PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo]) HSP 1 Score: 84.0 bits (206), Expect = 1.6e-13 Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. NCBI nr
Match: gi|700201003|gb|KGN56136.1| (hypothetical protein Csa_3G077700 [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-12 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. NCBI nr
Match: gi|922347079|ref|XP_013450451.1| (DUF3511 domain protein [Medicago truncatula]) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-12 Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
BLAST of ClCG03G017660.1 vs. NCBI nr
Match: gi|223548451|gb|EEF49942.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 80.1 bits (196), Expect = 2.3e-12 Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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