Carg25816-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTTCAGTATACACAGAGTACTGGTTGTCCTCCTCATGTGTGTTGTTGCACTTTTAGCTGTTCAACCAGATCAGGCTTGTGCTGTGAGAAGCATAGACCTTGCTCTAAGATCTAGTCGCCACATTCTTGTTGAAGACTCGAGGGTGGAGGAAAAGAACATGAAAAGGAATTCACTACCACGAAACAGCAAGTTTGATCCAAATCAATCAAGCAAAAGACGGGTTCGACGAGGTTCGGATCCTATCCACAACAAGTCTTAG ATGGTTTTCAGTATACACAGAGTACTGGTTGTCCTCCTCATGTGTGTTGTTGCACTTTTAGCTGTTCAACCAGATCAGGCTTGTGCTGTGAGAAGCATAGACCTTGCTCTAAGATCTAGTCGCCACATTCTTGTTGAAGACTCGAGGGTGGAGGAAAAGAACATGAAAAGGAATTCACTACCACGAAACAGCAAGTTTGATCCAAATCAATCAAGCAAAAGACGGGTTCGACGAGGTTCGGATCCTATCCACAACAAGTCTTAG ATGGTTTTCAGTATACACAGAGTACTGGTTGTCCTCCTCATGTGTGTTGTTGCACTTTTAGCTGTTCAACCAGATCAGGCTTGTGCTGTGAGAAGCATAGACCTTGCTCTAAGATCTAGTCGCCACATTCTTGTTGAAGACTCGAGGGTGGAGGAAAAGAACATGAAAAGGAATTCACTACCACGAAACAGCAAGTTTGATCCAAATCAATCAAGCAAAAGACGGGTTCGACGAGGTTCGGATCCTATCCACAACAAGTCTTAG MVFSIHRVLVVLLMCVVALLAVQPDQACAVRSIDLALRSSRHILVEDSRVEEKNMKRNSLPRNSKFDPNQSSKRRVRRGSDPIHNKS
BLAST of Carg25816-RA vs. NCBI nr
Match: KGN61380.1 (hypothetical protein Csa_2G101100 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 4.8e-29 Identity = 75/87 (86.21%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of Carg25816-RA vs. NCBI nr
Match: CAN64769.1 (hypothetical protein VITISV_010312 [Vitis vinifera]) HSP 1 Score: 75.9 bits (185), Expect = 7.7e-11 Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Carg25816-RA vs. NCBI nr
Match: ESR51929.1 (hypothetical protein CICLE_v10033178mg [Citrus clementina] >KDO82924.1 hypothetical protein CISIN_1g034426mg [Citrus sinensis]) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-10 Identity = 47/96 (48.96%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Carg25816-RA vs. NCBI nr
Match: PQQ19557.1 (hypothetical protein Pyn_07373 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 72.8 bits (177), Expect = 6.5e-10 Identity = 54/98 (55.10%), Postives = 64/98 (65.31%), Query Frame = 0
BLAST of Carg25816-RA vs. NCBI nr
Match: ONI30813.1 (hypothetical protein PRUPE_1G274800 [Prunus persica]) HSP 1 Score: 71.2 bits (173), Expect = 1.9e-09 Identity = 52/98 (53.06%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Carg25816-RA vs. TrEMBL
Match: tr|A0A0A0LHH0|A0A0A0LHH0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G101100 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.2e-29 Identity = 75/87 (86.21%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of Carg25816-RA vs. TrEMBL
Match: tr|A5APJ5|A5APJ5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010312 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.1e-11 Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Carg25816-RA vs. TrEMBL
Match: tr|V4VH78|V4VH78_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033178mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10 Identity = 47/96 (48.96%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Carg25816-RA vs. TrEMBL
Match: tr|A0A067GTG0|A0A067GTG0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034426mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10 Identity = 47/96 (48.96%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Carg25816-RA vs. TrEMBL
Match: tr|M5XJX5|M5XJX5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G274800 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.3e-09 Identity = 52/98 (53.06%), Postives = 59/98 (60.20%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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