Carg24215-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24215-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	homogentisate phytyltransferase 1
Location	Cucurbita_argyrosperma_scaffold_225 : 335147 .. 337235 (-)
Sequence length	258

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATTACAATTCTGCAGGTGTTCTGGGGTTGTATTTCATTGCTTGAAGTAGCATATGGTGTTGCCGTTTTGGTGGGAGTTGCATCTTCCTCCCCGTGGAGCAAGTTGCTAACGGTAAATCTTTGGTTCCTTGAAACCCATACTCAGACTGCATAATCATAGTTCTATTAAAAGAAAAAGGAAACAGTTCTTAAAACTGGTCTGCATGAGTCCAAACCTACCTTGAATTTCTGCTATTTTTAATTTGATATACTTAGAACTGGAAAAGGGAAATTAAACAGAGATATTAATAAGTACAAACATTGCAGTGCTTTAGTTCATTGATGCTGTGTAAGTTGGAGAGTGTCAAATTTTCTTTTTCTTGAGGTATAAAAAACGCAAGAGAGTCCTAGTTAATGTGTGTTATCTTTTTTAAATTACGTAGTTCGTTTATATTGTGCCACGGTTGGTGTTAACTAATTCAAAAACTGTCCAAGTCATCAAATAAATCTCTTCAATTTTTTCCTTAAATAAAAAGGACGTTTAATTGAAAGGATGTAGTATTTAGGTGAACAGTGAACACTATTGAAAGCCAGAGCAGTTAGTAAAATCCCTCTAAGTTGCTAAAAGGACTACGTTTGGATCTCCAAATTTGTAAATGCAATTTTGTCCCATGCCCTATCGACATATATTGTTCACACTTTCCACAAAAGAGTTCTGCCCTTAAGCCACAGAAAAACAGGACAAGACAACCTTTGACATGATAAGCAGCTCAAGGTACCAGCCTAACTACTTAAGAAGCTTCCTCCACAGTCCCTAAGTTAAAGGATAGGAAAAGAAAAGGTGGTCTGTTGATTATTGAGTTGCTCTTGCATAGGAAATAGGGATTACACCCTAGCGCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTTTCTTTCGAGCTTCCCCTCAAGGTTTTTAAAATGCGTCGGCTAGAGAGAGGTTTCCACACCCTTATAAATAGTGCTTCGTTCTCTTCTCCAACCGATGTGGGATCTCACAATCCACCCCCTTCGGGGTCCAGTGTCCTCGCTGGCACTCGTTCTCTTCTCCAACCGATGTGGGATCCCCCAATCCACCCCCCATCGGGGTCTAGCGTCTTTGCTGGTACACCATATCGTGTCCACCCCTCTTTGGGACTCAATTTCCTTACTAGCACATCACCTGGTGTCTGCCACTAATACCATTTGTAACAGCCCAAGCTCACCGCTAGTAGATATTGTCCTCTTTGGGTTTTCCTTTTCGAGCTTCCCTTCAAGGTTCTTAAGACGTGTCTGCTAGGGAGACCACACCCTTATAAAGAGTGCTTCGTTCTTCTCTCCAACTGATGTGGGATCTCACATAGGGGCTTGGTCGAAGCGCCAATGAAGGATATTTGAATTGAGCTTTCTTTGAAGTGTTACTCCTTCCAAATCCAAGGACTGAATAAAGAATTTAATATTTTAAGACATGAATATGCAAATTGTTGAGCTAATTGATCCATGTACTTTCGTTGCTTCAAATTGGAAGTCCCTAGTTCATGGTTTCACTAATTACTCTCCTCTGTAACCATTTTTTATGATACTAATTGGATTTTCTAAACCCTGGCTTGGATTTGGTTATCTCTAATCTTCCACCTTTCTTCAACTGTCTCCTATTAATTTAGTTTTTGTTTGCTGTCAAAGAAAGAGTAAGAAGTATCAAATTAATTAACCTATGATCTGTATAAATTCTTTAGGTTTCGGGACACGTCATTTTGGCTTCAATTCTGTGGATTCATGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTCTACATGTTTATATGGAAGGTATGCTGTAGGAGTTTATGGTAAAGCTGCCATAAAATAGTTGCAACTCTACTTTCAATATTTCAATATGTTATTAATTTCAAGTTTAATTTCTAATAGTTGTCCACTTTTAACCCGAGAGTCCCATGAATTGGTCAACCTCCATGTTTGAGATTAAAGATGTCAGATGCTTACAATATTTTAAAATCAGGGTCTCTAATGAACTCATGACTTTCCCTTAAAATTCAGGGCCTTCACCAGTTGA

mRNA sequence

ATGAGGATTACAATTCTGCAGGTGTTCTGGGGTTGTATTTCATTGCTTGAAGTAGCATATGGTGTTGCCGTTTTGGTGGGAGTTGCATCTTCCTCCCCGTGGAGCAAGTTGCTAACGGTTTCGGGACACGTCATTTTGGCTTCAATTCTGTGGATTCATGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTCTACATGTTTATATGGAAGGTATGCTGTAGGAGTTTATGGGCCTTCACCAGTTGA

Coding sequence (CDS)

ATGAGGATTACAATTCTGCAGGTGTTCTGGGGTTGTATTTCATTGCTTGAAGTAGCATATGGTGTTGCCGTTTTGGTGGGAGTTGCATCTTCCTCCCCGTGGAGCAAGTTGCTAACGGTTTCGGGACACGTCATTTTGGCTTCAATTCTGTGGATTCATGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTCTACATGTTTATATGGAAGGTATGCTGTAGGAGTTTATGGGCCTTCACCAGTTGA

Protein sequence

MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKVCCRSLWAFTS

Homology

[Close]

BLAST of Carg24215-RA vs. NCBI nr
Match: XP_022938199.1 (homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT
Sbjct: 321 RVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 380

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 381 SFYMFIWKL 389

[Close]

BLAST of Carg24215-RA vs. NCBI nr
Match: XP_022969658.1 (homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita maxima] >XP_022969660.1 homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTV GHVILASILWI AKSVDLKSKAAIT
Sbjct: 321 RVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVLGHVILASILWIRAKSVDLKSKAAIT 380

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 381 SFYMFIWKL 389

[Close]

BLAST of Carg24215-RA vs. NCBI nr
Match: XP_023537912.1 (homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTV GHVILASILWI AKSVDLKSKAAIT
Sbjct: 321 RVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVLGHVILASILWIRAKSVDLKSKAAIT 380

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 381 SFYMFIWKL 389

[Close]

BLAST of Carg24215-RA vs. NCBI nr
Match: XP_022997421.1 (homogentisate phytyltransferase 1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GH+ LAS+LWI AKSVDLKSKAAIT
Sbjct: 324 RVFWSCISLLEVAYSAAVLVGVASSSPWSKWLTVVGHITLASVLWIRAKSVDLKSKAAIT 383

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 384 SFYMFIWKL 392

[Close]

BLAST of Carg24215-RA vs. NCBI nr
Match: XP_022997420.1 (homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GH+ LAS+LWI AKSVDLKSKAAIT
Sbjct: 325 RVFWSCISLLEVAYSAAVLVGVASSSPWSKWLTVVGHITLASVLWIRAKSVDLKSKAAIT 384

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 385 SFYMFIWKL 393

[Close]

BLAST of Carg24215-RA vs. TAIR10
Match: AT2G18950.1 (homogentisate phytyltransferase 1)

HSP 1 Score: 90.5 bits (223), Expect = 5.4e-19
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW C++LL++AY VA+LVG  S   WSK+++V GHVILA+ LW  AKSVDL SK  IT
Sbjct: 313 RVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEIT 372

Query: 67  SFYMFIWKV 76
           S YMFIWK+
Sbjct: 373 SCYMFIWKL 381

[Close]

BLAST of Carg24215-RA vs. Swiss-Prot
Match: sp|B1B5P4|N8DT2_SOPFL (Naringenin 8-dimethylallyltransferase 2, chloroplastic OS=Sophora flavescens OX=49840 GN=N8DT-2 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-19
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   +VFW C+SLLE+AYGV +LVG  S   WSK++TV GH ILAS+LW HAKS DL 
Sbjct: 321 LRLGPKRVFWICVSLLEMAYGVTILVGATSPILWSKIITVLGHAILASVLWYHAKSTDLT 380

Query: 61  SKAAITSFYMFIWKV 76
           S   + SFYMFIWK+
Sbjct: 381 SNVVLQSFYMFIWKL 395

[Close]

BLAST of Carg24215-RA vs. Swiss-Prot
Match: sp|B1B3P3|N8DT1_SOPFL (Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora flavescens OX=49840 GN=N8DT-1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.7e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   +VFW C+SLLE+ YGV +LVG  S   WSK++TV GH +LAS+LW HAKSVDL 
Sbjct: 324 LRLGPKRVFWICVSLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYHAKSVDLT 383

Query: 61  SKAAITSFYMFIWKV 76
           S   + SFYMFIWK+
Sbjct: 384 SNVVLHSFYMFIWKL 398

[Close]

BLAST of Carg24215-RA vs. Swiss-Prot
Match: sp|Q8VWJ1|HPT1_ARATH (Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HPT1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-18
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW C++LL++AY VA+LVG  S   WSK+++V GHVILA+ LW  AKSVDL SK  IT
Sbjct: 313 RVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEIT 372

Query: 67  SFYMFIWKV 76
           S YMFIWK+
Sbjct: 373 SCYMFIWKL 381

[Close]

BLAST of Carg24215-RA vs. Swiss-Prot
Match: sp|B7FA90|HPT1_ORYSJ (Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HPT1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-17
Identity = 44/75 (58.67%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   +VFW C+ LLE+AY VA+L+G  S+  WSK  TV GH ILA+ILW  ++S+DL 
Sbjct: 318 VRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLT 377

Query: 61  SKAAITSFYMFIWKV 76
           SK AITSFYMFIWK+
Sbjct: 378 SKTAITSFYMFIWKL 392

[Close]

BLAST of Carg24215-RA vs. Swiss-Prot
Match: sp|B9A1Q4|G4DT_SOYBN (Glycinol 4-dimethylallyltransferase OS=Glycine max OX=3847 GN=G4DT PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   + FW C+S  E+A+GV +L G + S  W+K+ T  G+ +LASILW  AKSVDL 
Sbjct: 323 VRLGQKRAFWICVSFFEMAFGVGILAGASCSHFWTKIFTGMGNAVLASILWYQAKSVDLS 382

Query: 61  SKAAITSFYMFIWKV 76
            KA+  SFYMFIWK+
Sbjct: 383 DKASTGSFYMFIWKL 397

[Close]

BLAST of Carg24215-RA vs. TrEMBL
Match: tr|A0A1S4E1V5|A0A1S4E1V5_CUCME (homogentisate phytyltransferase 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492819 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-23
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GHV L SILWI AKSVDLKSKAAIT
Sbjct: 295 RVFWSCISLLEVAYTAAVLVGVASSSPWSKWLTVLGHVTLGSILWIRAKSVDLKSKAAIT 354

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 355 SFYMFIWKL 363

[Close]

BLAST of Carg24215-RA vs. TrEMBL
Match: tr|A0A1S3BRS9|A0A1S3BRS9_CUCME (homogentisate phytyltransferase 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492819 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-23
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GHV L SILWI AKSVDLKSKAAIT
Sbjct: 329 RVFWSCISLLEVAYTAAVLVGVASSSPWSKWLTVLGHVTLGSILWIRAKSVDLKSKAAIT 388

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 389 SFYMFIWKL 397

[Close]

BLAST of Carg24215-RA vs. TrEMBL
Match: tr|A0A0A0LKA3|A0A0A0LKA3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059830 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-22
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVL+GVASSSPWSK LTV GHV L SILWI AKSVDLKSKAAIT
Sbjct: 329 RVFWSCISLLEVAYTSAVLMGVASSSPWSKWLTVLGHVTLGSILWIRAKSVDLKSKAAIT 388

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 389 SFYMFIWKL 397

[Close]

BLAST of Carg24215-RA vs. TrEMBL
Match: tr|A0A2N9HW89|A0A2N9HW89_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46098 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21
Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   +VFW CISLLE+AYGVA+LVG+ASSS WSKL+TV GH ILAS+LW  AKSVDLK
Sbjct: 327 VRLGQSRVFWTCISLLEMAYGVALLVGIASSSLWSKLITVLGHTILASVLWNRAKSVDLK 386

Query: 61  SKAAITSFYMFIWKV 76
           SK AITSFYMFIWKV
Sbjct: 387 SKDAITSFYMFIWKV 401

[Close]

BLAST of Carg24215-RA vs. TrEMBL
Match: tr|A0A2P5XWQ1|A0A2P5XWQ1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12876 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.1e-21
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLE+AYG+++LVG  S   WSK++TV GH +LASILWIHAKSVDLKSKAAIT
Sbjct: 274 KVFWTCISLLEMAYGISILVGATSPYTWSKVITVLGHSVLASILWIHAKSVDLKSKAAIT 333

Query: 67  SFYMFIWKV 76
           S YMFIWKV
Sbjct: 334 SCYMFIWKV 342

The following BLAST results are available for this feature:

BLAST of Carg24215-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938199.1	3.0e-28	97.10	homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita moschata]	[more]
XP_022969658.1	1.3e-26	94.20	homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita maxima] >XP_022...	[more]
XP_023537912.1	1.3e-26	94.20	homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita pepo subsp. pep...	[more]
XP_022997421.1	2.9e-23	84.06	homogentisate phytyltransferase 1, chloroplastic-like isoform X2 [Cucurbita maxi...	[more]
XP_022997420.1	2.9e-23	84.06	homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [Cucurbita maxi...	[more]

BLAST of Carg24215-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18950.1	5.4e-19	62.32	homogentisate phytyltransferase 1	[more]

BLAST of Carg24215-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B1B5P4\|N8DT2_SOPFL	3.9e-19	60.00	Naringenin 8-dimethylallyltransferase 2, chloroplastic OS=Sophora flavescens OX=...	[more]
sp\|B1B3P3\|N8DT1_SOPFL	6.7e-19	58.67	Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora flavescens OX=...	[more]
sp\|Q8VWJ1\|HPT1_ARATH	9.7e-18	62.32	Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
sp\|B7FA90\|HPT1_ORYSJ	1.6e-17	58.67	Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza sativa subsp....	[more]
sp\|B9A1Q4\|G4DT_SOYBN	1.3e-14	50.67	Glycinol 4-dimethylallyltransferase OS=Glycine max OX=3847 GN=G4DT PE=1 SV=1	[more]

BLAST of Carg24215-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E1V5\|A0A1S4E1V5_CUCME	5.7e-23	85.51	homogentisate phytyltransferase 1, chloroplastic isoform X2 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S3BRS9\|A0A1S3BRS9_CUCME	5.7e-23	85.51	homogentisate phytyltransferase 1, chloroplastic isoform X1 OS=Cucumis melo OX=3...	[more]
tr\|A0A0A0LKA3\|A0A0A0LKA3_CUCSA	2.2e-22	84.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059830 PE=4 SV=1	[more]
tr\|A0A2N9HW89\|A0A2N9HW89_FAGSY	1.1e-21	76.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46098 PE=4 SV=1	[more]
tr\|A0A2P5XWQ1\|A0A2P5XWQ1_GOSBA	9.1e-21	75.36	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12876 PE=4 SV...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg24215	Carg24215	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg24215-RA	Carg24215-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24215-RA.CDS.3	Carg24215-RA.CDS.3	CDS
Carg24215-RA.CDS.2	Carg24215-RA.CDS.2	CDS
Carg24215-RA.CDS.1	Carg24215-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24215-RA.exon.3	Carg24215-RA.exon.3	exon
Carg24215-RA.exon.2	Carg24215-RA.exon.2	exon
Carg24215-RA.exon.1	Carg24215-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43009:SF2	HOMOGENTISATE PHYTYLTRANSFERASE 1, CHLOROPLASTIC	coord: 6..75
None	No IPR available	PANTHER	PTHR43009	FAMILY NOT NAMED	coord: 6..75