Carg24215 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24215
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	homogentisate phytyltransferase 1
Location	Cucurbita_argyrosperma_scaffold_225 : 335147 .. 337235 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATTACAATTCTGCAGGTGTTCTGGGGTTGTATTTCATTGCTTGAAGTAGCATATGGTGTTGCCGTTTTGGTGGGAGTTGCATCTTCCTCCCCGTGGAGCAAGTTGCTAACGGTAAATCTTTGGTTCCTTGAAACCCATACTCAGACTGCATAATCATAGTTCTATTAAAAGAAAAAGGAAACAGTTCTTAAAACTGGTCTGCATGAGTCCAAACCTACCTTGAATTTCTGCTATTTTTAATTTGATATACTTAGAACTGGAAAAGGGAAATTAAACAGAGATATTAATAAGTACAAACATTGCAGTGCTTTAGTTCATTGATGCTGTGTAAGTTGGAGAGTGTCAAATTTTCTTTTTCTTGAGGTATAAAAAACGCAAGAGAGTCCTAGTTAATGTGTGTTATCTTTTTTAAATTACGTAGTTCGTTTATATTGTGCCACGGTTGGTGTTAACTAATTCAAAAACTGTCCAAGTCATCAAATAAATCTCTTCAATTTTTTCCTTAAATAAAAAGGACGTTTAATTGAAAGGATGTAGTATTTAGGTGAACAGTGAACACTATTGAAAGCCAGAGCAGTTAGTAAAATCCCTCTAAGTTGCTAAAAGGACTACGTTTGGATCTCCAAATTTGTAAATGCAATTTTGTCCCATGCCCTATCGACATATATTGTTCACACTTTCCACAAAAGAGTTCTGCCCTTAAGCCACAGAAAAACAGGACAAGACAACCTTTGACATGATAAGCAGCTCAAGGTACCAGCCTAACTACTTAAGAAGCTTCCTCCACAGTCCCTAAGTTAAAGGATAGGAAAAGAAAAGGTGGTCTGTTGATTATTGAGTTGCTCTTGCATAGGAAATAGGGATTACACCCTAGCGCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTTTCTTTCGAGCTTCCCCTCAAGGTTTTTAAAATGCGTCGGCTAGAGAGAGGTTTCCACACCCTTATAAATAGTGCTTCGTTCTCTTCTCCAACCGATGTGGGATCTCACAATCCACCCCCTTCGGGGTCCAGTGTCCTCGCTGGCACTCGTTCTCTTCTCCAACCGATGTGGGATCCCCCAATCCACCCCCCATCGGGGTCTAGCGTCTTTGCTGGTACACCATATCGTGTCCACCCCTCTTTGGGACTCAATTTCCTTACTAGCACATCACCTGGTGTCTGCCACTAATACCATTTGTAACAGCCCAAGCTCACCGCTAGTAGATATTGTCCTCTTTGGGTTTTCCTTTTCGAGCTTCCCTTCAAGGTTCTTAAGACGTGTCTGCTAGGGAGACCACACCCTTATAAAGAGTGCTTCGTTCTTCTCTCCAACTGATGTGGGATCTCACATAGGGGCTTGGTCGAAGCGCCAATGAAGGATATTTGAATTGAGCTTTCTTTGAAGTGTTACTCCTTCCAAATCCAAGGACTGAATAAAGAATTTAATATTTTAAGACATGAATATGCAAATTGTTGAGCTAATTGATCCATGTACTTTCGTTGCTTCAAATTGGAAGTCCCTAGTTCATGGTTTCACTAATTACTCTCCTCTGTAACCATTTTTTATGATACTAATTGGATTTTCTAAACCCTGGCTTGGATTTGGTTATCTCTAATCTTCCACCTTTCTTCAACTGTCTCCTATTAATTTAGTTTTTGTTTGCTGTCAAAGAAAGAGTAAGAAGTATCAAATTAATTAACCTATGATCTGTATAAATTCTTTAGGTTTCGGGACACGTCATTTTGGCTTCAATTCTGTGGATTCATGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTCTACATGTTTATATGGAAGGTATGCTGTAGGAGTTTATGGTAAAGCTGCCATAAAATAGTTGCAACTCTACTTTCAATATTTCAATATGTTATTAATTTCAAGTTTAATTTCTAATAGTTGTCCACTTTTAACCCGAGAGTCCCATGAATTGGTCAACCTCCATGTTTGAGATTAAAGATGTCAGATGCTTACAATATTTTAAAATCAGGGTCTCTAATGAACTCATGACTTTCCCTTAAAATTCAGGGCCTTCACCAGTTGA

mRNA sequence

ATGAGGATTACAATTCTGCAGGTGTTCTGGGGTTGTATTTCATTGCTTGAAGTAGCATATGGTGTTGCCGTTTTGGTGGGAGTTGCATCTTCCTCCCCGTGGAGCAAGTTGCTAACGGTTTCGGGACACGTCATTTTGGCTTCAATTCTGTGGATTCATGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTCTACATGTTTATATGGAAGGTATGCTGTAGGAGTTTATGGGCCTTCACCAGTTGA

Coding sequence (CDS)

ATGAGGATTACAATTCTGCAGGTGTTCTGGGGTTGTATTTCATTGCTTGAAGTAGCATATGGTGTTGCCGTTTTGGTGGGAGTTGCATCTTCCTCCCCGTGGAGCAAGTTGCTAACGGTTTCGGGACACGTCATTTTGGCTTCAATTCTGTGGATTCATGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTCTACATGTTTATATGGAAGGTATGCTGTAGGAGTTTATGGGCCTTCACCAGTTGA

Protein sequence

MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAITSFYMFIWKVCCRSLWAFTS

Homology

[Close]

BLAST of Carg24215 vs. NCBI nr
Match: XP_022938199.1 (homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT
Sbjct: 321 RVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 380

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 381 SFYMFIWKL 389

[Close]

BLAST of Carg24215 vs. NCBI nr
Match: XP_022969658.1 (homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita maxima] >XP_022969660.1 homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTV GHVILASILWI AKSVDLKSKAAIT
Sbjct: 321 RVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVLGHVILASILWIRAKSVDLKSKAAIT 380

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 381 SFYMFIWKL 389

[Close]

BLAST of Carg24215 vs. NCBI nr
Match: XP_023537912.1 (homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFWGCISLLEVAYGVAVLVGVASSSPWSKLLTV GHVILASILWI AKSVDLKSKAAIT
Sbjct: 321 RVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVLGHVILASILWIRAKSVDLKSKAAIT 380

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 381 SFYMFIWKL 389

[Close]

BLAST of Carg24215 vs. NCBI nr
Match: XP_022997421.1 (homogentisate phytyltransferase 1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GH+ LAS+LWI AKSVDLKSKAAIT
Sbjct: 324 RVFWSCISLLEVAYSAAVLVGVASSSPWSKWLTVVGHITLASVLWIRAKSVDLKSKAAIT 383

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 384 SFYMFIWKL 392

[Close]

BLAST of Carg24215 vs. NCBI nr
Match: XP_022997420.1 (homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-23
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GH+ LAS+LWI AKSVDLKSKAAIT
Sbjct: 325 RVFWSCISLLEVAYSAAVLVGVASSSPWSKWLTVVGHITLASVLWIRAKSVDLKSKAAIT 384

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 385 SFYMFIWKL 393

[Close]

BLAST of Carg24215 vs. TAIR10
Match: AT2G18950.1 (homogentisate phytyltransferase 1)

HSP 1 Score: 90.5 bits (223), Expect = 5.4e-19
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW C++LL++AY VA+LVG  S   WSK+++V GHVILA+ LW  AKSVDL SK  IT
Sbjct: 313 RVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEIT 372

Query: 67  SFYMFIWKV 76
           S YMFIWK+
Sbjct: 373 SCYMFIWKL 381

[Close]

BLAST of Carg24215 vs. Swiss-Prot
Match: sp|B1B5P4|N8DT2_SOPFL (Naringenin 8-dimethylallyltransferase 2, chloroplastic OS=Sophora flavescens OX=49840 GN=N8DT-2 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-19
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   +VFW C+SLLE+AYGV +LVG  S   WSK++TV GH ILAS+LW HAKS DL 
Sbjct: 321 LRLGPKRVFWICVSLLEMAYGVTILVGATSPILWSKIITVLGHAILASVLWYHAKSTDLT 380

Query: 61  SKAAITSFYMFIWKV 76
           S   + SFYMFIWK+
Sbjct: 381 SNVVLQSFYMFIWKL 395

[Close]

BLAST of Carg24215 vs. Swiss-Prot
Match: sp|B1B3P3|N8DT1_SOPFL (Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora flavescens OX=49840 GN=N8DT-1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.7e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   +VFW C+SLLE+ YGV +LVG  S   WSK++TV GH +LAS+LW HAKSVDL 
Sbjct: 324 LRLGPKRVFWICVSLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYHAKSVDLT 383

Query: 61  SKAAITSFYMFIWKV 76
           S   + SFYMFIWK+
Sbjct: 384 SNVVLHSFYMFIWKL 398

[Close]

BLAST of Carg24215 vs. Swiss-Prot
Match: sp|Q8VWJ1|HPT1_ARATH (Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HPT1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-18
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW C++LL++AY VA+LVG  S   WSK+++V GHVILA+ LW  AKSVDL SK  IT
Sbjct: 313 RVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEIT 372

Query: 67  SFYMFIWKV 76
           S YMFIWK+
Sbjct: 373 SCYMFIWKL 381

[Close]

BLAST of Carg24215 vs. Swiss-Prot
Match: sp|B7FA90|HPT1_ORYSJ (Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HPT1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-17
Identity = 44/75 (58.67%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   +VFW C+ LLE+AY VA+L+G  S+  WSK  TV GH ILA+ILW  ++S+DL 
Sbjct: 318 VRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLT 377

Query: 61  SKAAITSFYMFIWKV 76
           SK AITSFYMFIWK+
Sbjct: 378 SKTAITSFYMFIWKL 392

[Close]

BLAST of Carg24215 vs. Swiss-Prot
Match: sp|B9A1Q4|G4DT_SOYBN (Glycinol 4-dimethylallyltransferase OS=Glycine max OX=3847 GN=G4DT PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   + FW C+S  E+A+GV +L G + S  W+K+ T  G+ +LASILW  AKSVDL 
Sbjct: 323 VRLGQKRAFWICVSFFEMAFGVGILAGASCSHFWTKIFTGMGNAVLASILWYQAKSVDLS 382

Query: 61  SKAAITSFYMFIWKV 76
            KA+  SFYMFIWK+
Sbjct: 383 DKASTGSFYMFIWKL 397

[Close]

BLAST of Carg24215 vs. TrEMBL
Match: tr|A0A1S4E1V5|A0A1S4E1V5_CUCME (homogentisate phytyltransferase 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492819 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-23
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GHV L SILWI AKSVDLKSKAAIT
Sbjct: 295 RVFWSCISLLEVAYTAAVLVGVASSSPWSKWLTVLGHVTLGSILWIRAKSVDLKSKAAIT 354

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 355 SFYMFIWKL 363

[Close]

BLAST of Carg24215 vs. TrEMBL
Match: tr|A0A1S3BRS9|A0A1S3BRS9_CUCME (homogentisate phytyltransferase 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492819 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-23
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVLVGVASSSPWSK LTV GHV L SILWI AKSVDLKSKAAIT
Sbjct: 329 RVFWSCISLLEVAYTAAVLVGVASSSPWSKWLTVLGHVTLGSILWIRAKSVDLKSKAAIT 388

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 389 SFYMFIWKL 397

[Close]

BLAST of Carg24215 vs. TrEMBL
Match: tr|A0A0A0LKA3|A0A0A0LKA3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059830 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-22
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLEVAY  AVL+GVASSSPWSK LTV GHV L SILWI AKSVDLKSKAAIT
Sbjct: 329 RVFWSCISLLEVAYTSAVLMGVASSSPWSKWLTVLGHVTLGSILWIRAKSVDLKSKAAIT 388

Query: 67  SFYMFIWKV 76
           SFYMFIWK+
Sbjct: 389 SFYMFIWKL 397

[Close]

BLAST of Carg24215 vs. TrEMBL
Match: tr|A0A2N9HW89|A0A2N9HW89_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46098 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21
Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 1   MRITILQVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLK 60
           +R+   +VFW CISLLE+AYGVA+LVG+ASSS WSKL+TV GH ILAS+LW  AKSVDLK
Sbjct: 327 VRLGQSRVFWTCISLLEMAYGVALLVGIASSSLWSKLITVLGHTILASVLWNRAKSVDLK 386

Query: 61  SKAAITSFYMFIWKV 76
           SK AITSFYMFIWKV
Sbjct: 387 SKDAITSFYMFIWKV 401

[Close]

BLAST of Carg24215 vs. TrEMBL
Match: tr|A0A2P5XWQ1|A0A2P5XWQ1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12876 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.1e-21
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 7   QVFWGCISLLEVAYGVAVLVGVASSSPWSKLLTVSGHVILASILWIHAKSVDLKSKAAIT 66
           +VFW CISLLE+AYG+++LVG  S   WSK++TV GH +LASILWIHAKSVDLKSKAAIT
Sbjct: 274 KVFWTCISLLEMAYGISILVGATSPYTWSKVITVLGHSVLASILWIHAKSVDLKSKAAIT 333

Query: 67  SFYMFIWKV 76
           S YMFIWKV
Sbjct: 334 SCYMFIWKV 342

The following BLAST results are available for this feature:

BLAST of Carg24215 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938199.1	3.0e-28	97.10	homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita moschata]	[more]
XP_022969658.1	1.3e-26	94.20	homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita maxima] >XP_022...	[more]
XP_023537912.1	1.3e-26	94.20	homogentisate phytyltransferase 1, chloroplastic-like [Cucurbita pepo subsp. pep...	[more]
XP_022997421.1	2.9e-23	84.06	homogentisate phytyltransferase 1, chloroplastic-like isoform X2 [Cucurbita maxi...	[more]
XP_022997420.1	2.9e-23	84.06	homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [Cucurbita maxi...	[more]

BLAST of Carg24215 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18950.1	5.4e-19	62.32	homogentisate phytyltransferase 1	[more]

BLAST of Carg24215 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B1B5P4\|N8DT2_SOPFL	3.9e-19	60.00	Naringenin 8-dimethylallyltransferase 2, chloroplastic OS=Sophora flavescens OX=...	[more]
sp\|B1B3P3\|N8DT1_SOPFL	6.7e-19	58.67	Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora flavescens OX=...	[more]
sp\|Q8VWJ1\|HPT1_ARATH	9.7e-18	62.32	Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
sp\|B7FA90\|HPT1_ORYSJ	1.6e-17	58.67	Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza sativa subsp....	[more]
sp\|B9A1Q4\|G4DT_SOYBN	1.3e-14	50.67	Glycinol 4-dimethylallyltransferase OS=Glycine max OX=3847 GN=G4DT PE=1 SV=1	[more]

BLAST of Carg24215 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E1V5\|A0A1S4E1V5_CUCME	5.7e-23	85.51	homogentisate phytyltransferase 1, chloroplastic isoform X2 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S3BRS9\|A0A1S3BRS9_CUCME	5.7e-23	85.51	homogentisate phytyltransferase 1, chloroplastic isoform X1 OS=Cucumis melo OX=3...	[more]
tr\|A0A0A0LKA3\|A0A0A0LKA3_CUCSA	2.2e-22	84.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059830 PE=4 SV=1	[more]
tr\|A0A2N9HW89\|A0A2N9HW89_FAGSY	1.1e-21	76.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46098 PE=4 SV=1	[more]
tr\|A0A2P5XWQ1\|A0A2P5XWQ1_GOSBA	9.1e-21	75.36	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12876 PE=4 SV...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24215-RA	Carg24215-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43009:SF2	HOMOGENTISATE PHYTYLTRANSFERASE 1, CHLOROPLASTIC	coord: 6..75
None	No IPR available	PANTHER	PTHR43009	FAMILY NOT NAMED	coord: 6..75

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24215	Csa2G059830	Cucumber (Chinese Long) v2	carcuB1009
Carg24215	MELO3C004006	Melon (DHL92) v3.5.1	carmeB0970
Carg24215	ClCG11G012020	Watermelon (Charleston Gray)	carwcgB0969
Carg24215	CSPI02G06160	Wild cucumber (PI 183967)	carcpiB1033
Carg24215	Cucsa.089230	Cucumber (Gy14) v1	carcgyB1112
Carg24215	CmaCh12G008890	Cucurbita maxima (Rimu)	carcmaB1378
Carg24215	CmoCh12G008970	Cucurbita moschata (Rifu)	carcmoB1333
Carg24215	Cp4.1LG07g07320	Cucurbita pepo (Zucchini)	carcpeB1382
Carg24215	CsGy2G006310	Cucumber (Gy14) v2	carcgybB0982
Carg24215	MELO3C004006.2	Melon (DHL92) v3.6.1	carmedB0980
Carg24215	CsaV3_2G008500	Cucumber (Chinese Long) v3	carcucB1039
Carg24215	Cla97C11G217970	Watermelon (97103) v2	carwmbB1048
Carg24215	Bhi06G001105	Wax gourd	carwgoB1164

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24215	Carg08382	Silver-seed gourd	carcarB073

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24215	Cucurbita maxima (Rimu)	carcmaB1379
Carg24215	Cucurbita moschata (Rifu)	carcmoB1334
Carg24215	Cucurbita pepo (Zucchini)	carcpeB1381
Carg24215	Wild cucumber (PI 183967)	carcpiB1032
Carg24215	Cucumber (Chinese Long) v2	carcuB1008
Carg24215	Cucumber (Chinese Long) v3	carcucB1038
Carg24215	Bottle gourd (USVL1VR-Ls)	carlsiB908
Carg24215	Bottle gourd (USVL1VR-Ls)	carlsiB909
Carg24215	Melon (DHL92) v3.5.1	carmeB0969
Carg24215	Melon (DHL92) v3.6.1	carmedB0979
Carg24215	Watermelon (Charleston Gray)	carwcgB0970
Carg24215	Watermelon (97103) v1	carwmB0994
Carg24215	Watermelon (97103) v1	carwmB0995