Carg23300-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTATATAGTTCCCCAAAAAATGCCTTCTTTTGTTGGTGGAGCTCAAGCTAAAGATGTCTCTTCTCTTCACCTTCCTTCTTCCTCTTCTTGTCGTCCTCTTACTCTTAAGGTATGGATGTTTCGGGGTGAGCTTCAAATTTTGTTCCATGTTTGGATGTGTTTTTTTGTGATGATTTTTCCGTGTTTGTAGTTTGTAGATGTGAGTTATCGAGTGAAGGTGACGAACAAGAGTGGAAATACTATTGGACGGATTTTTGGATGTGGGTCCGGCGATGGGGCGGCGCCGCCCGTTCAAGAACGGAGTATTCTTCATGGGGTTTCTGGGATGGTGTCGCCGGGAGAGACTTTGGCCATTCTTGGCCCGTCCGGAAGTGGCAAGTCAACTCTTCTTAATGCTCTTGCTGGAAGATTACAGGTCATATTTAGCCTTGAACTATGATTTACCATAATATATATCATATTTGCCTTCTATTACGGTTTAACATAGATATCATATTTGATCTTTTATTATATATAAATATCTGGTATGATATTTAACTTTCAATTACTTTTTACCCTAAGTATTATATTTGCCCTTTTATTATAGACAAATATCTCGTGTGATTGAGGATATTTCACATTTAATCGTAAATATTATATTCGATCATTTATTATATACAAATATCTTTCATTGTGGTTTTTCGTAGTCAAATATTTTAAATATAATCCTCATTTTCTTTGTAATTTATTTGATTCTATAAAAAATATAGAATTTCCAAGTTTTAAAGAGTTAAAATAGACATTTTTAGGTAAAAAAGAGGTATGACCCTCTTATATTGATAACAGGGCGACGGTCTAACCGGGTTAGTGTTGGCTAACGGTCAAAAGCTTTCCAAATCGATACTCCGATGGACCGGGTTCGTGACACAGGACGACGTCCTCTACCCACACTTAACTGTCCGAGAAACTCTCATATTCTGCTCTCTCCTCCGACTACCTCTTTCCCTCTCAAAGCAAGACAAAGTCGCAGTGGCCGAGTCAGTGATCGTCGAGCTCGGGCTAACGAAATGCCAAAACACAATCATCGGAAACGCCTTCATCCGTGGCGTCTCGGGTGGAGAACGAAAAAGAGTGAGCATAGGCCACGAGATGCTCATAAACCCAAGCCTACTAATTCTCGACGAGCCGACATCAGGGCTAGACTCAACCGCAGCGCACCGGCTGGTGACCACCATGGCTGCGCTGGCTCACAAGGGGAAGACCATAGTGACCTCAATTCACCAACCATCGAGCCGGGTGTACCAAACCTTTGACAAGGTGCTGGTGCTGTCGGAAGGGCGATGCTTGTATTATGGGAAAGGAAGTGAAGCAATGAGCTATTTTGAGTCTATTGGGTTCACACCTTCTTTTCCCATGAACCCAGCTGATTTTCTCCTCGATCTCGCCAATGGTACGTATTTTTTTTTTTAATTTATTTTCTTCATATCGTATTTAAATCTTCATTAATTTTTTTATTTATCAATAATTTAACTTTGATTAGGAGCTAATTAACCATGGAAAATCACATTAAGCTTTTAGGTTGATTTTAAAATTTTCATTTTTTTTTTTTACTAATTAATTCTTGGGTCTAAAAATTATTAATTTAACTTTTTTTTTTTAATAAATTAGTGAATATTGTGTTCATTATCCACGAGGAACTTTTTAGGGTTTCTTTCACAACCACCTTTAAAAAAGAAAAAAGAAAATATTAATAATCTTTTCTTTAATTGTTCTTTGTCTATAATTTTAATGAAAATTTAGAGGAAAAAGAAGGTGGGTCGAGAGTATTATGGTAAATAAGGTAAATAAGTGTTTATTCTAACACTATAATCAGTAAAATATATCTAAACTAATTGAGCTATACTTAAATTGATATTAAAATTTTATTTTCATTACTTAAATTGATATTAAAAATGTATTTAATGAAAATAAAATAATAAAAAGAAAGAGACAGAAAATTAAATTCTCATCTCATAAAATATCAGAAGCCTGAAATGACCATAAAATAGGGGACCGACCTCCTCATTAAAATGCAAGCTGTCAAAAAAGAGAGTCCTCAATTATCTATATATATATATATATATATAGATATAGATAGGATGGCAAGTGAGTTGGAAAAATATTAATAAATTAGATATGTTTATTAACCTGTGGAGTCGGATTCGTGGGAACCCACTTCAAATAGGATGAGAAATCTAGGATTAAGTTGGGAATAGAAACGAGGGTGAGGAGAGATTTCTACTTGTTAAGTAAATAAGGATGGAGACGGTACCTGTAGAAAATCTCCATTTTGATACTCATAAAAATAAATAAAAAATTTTGTAGGGATAGAAGTTGACATAGGAGACGGGAACAGGAACAAGGAAAGGCTTGTTCTTGTCCCCATTCCTTGAACGTCTCTAAAGACAACATACTTAGATTTACCTTAAATCCATCAAATCACCTTCCTCCGTCTAACAAAAACCACAACTTTTGAAAACAAATCTCCACAACTTTTAATCCTTAAAGGGTTGTTTTTCCTTTTGTTTTTGCCTTTTAAAAGGTCTCTAAAGAGATAAATATTTCAAACCCCTTTGTGGAGAATAAAGCCTAAGAGAGATTTTCCCCCTTTCTTAATGTGGTTAGGAATCATATGTGAGAGAGGATACAAAGTAAAACATTAATGTGTTGGAGACATACATATATAAATATATAATATGCTTTTGAAAACCATGATTATAAAGTGCGGGAAGGTTTCGATTTGGCAATTTTTAGTGCATAATGGATCCCGTTCTTAATTACTTTTTAAAATATAATATCAGATTCAAATTTACATCTCTTATATTTGATTCGTTTAGGGTTTAGGGTTTAGGTTTACGTTGATTTTTTTAATATTGGAAGAAGTAGATTAGGGTAGACACGTGTCGAGTAGGGCGACATGTGTAGGACTGAGATTTTGCAGTCCCATTGGGATATAATGATAGCATTTTGGAATGGGCATGATGGGCGCCCAAAGTGCTTGGTGGAAGGCACCAACCATTAGTGGAACTCTTGCCTTTACCACCAACAATGGTCAATGTTTTTTTCAAAAGAGTTATGGCTGTTCCTTATTTTAAATGTTTTTTTTTTCATTTCTTTTTTGGTATATTTAATATTTAATGCTTTTGTGTTCATGGGAAATAAATTATTAAGATAGTTATATAATGGGAAACATCCCGTTTTAGAATCTACACGTGCATGCATTTTAAGGGTCTTTCTTTAGTCCTTTAAATAGGAGTGTTCATGGTTGGTCGGGAGGCTAAGACTATAGTGTACTTCGTTCTAGGGGAGGATTGTTGGGAGGGAGTCCCACATTGGCTCCACGTTGGATAATTCTCAAATGTCAAACAAAGAAGTTGTGAACCTCGAAAGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAATGGTGTACTTTGTTCGAGAACTCCAAAGAAGTCGAGCCTCGATTGAGGGGAGGCTGTTCGAGGGCTCCATAGGCCTCAGGAGAAGCTATAGTGTTCTTTGTTCGAATGGAGAATTGTTGGGAGGGAGTCCCACATTGGCTAATTTAGGGAAATGATCATGGGTTTATAAGTAAGGAATACATCTCTATTGATAGGAGACCTTTTGGGAAAGCCCAAAACAAAGTCATGAGAGGTTATACTCACAGTGAACAATATCATACCATTGTAGAGAGTCGTGATTCCTAACCTGAGTTGATCAATTTTGAATAGTGAAAATAAAGTTGTAGTTTTGGTGTGGTATGTGAATTTAGAAGTTGATTTTGTGTTATTTTCATGCATGTAGGTGTATACCAAGTTGAAAATACAAGTGAAGGAGAGAAACCCAACATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCTCTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATCACTGCGG CTTTATATAGTTCCCCAAAAAATGCCTTCTTTTGTTGGTGGAGCTCAAGCTAAAGATGTCTCTTCTCTTCACCTTCCTTCTTCCTCTTCTTGTCGTCCTCTTACTCTTAAGTTTGTAGATGTGAGTTATCGAGTGAAGGTGACGAACAAGAGTGGAAATACTATTGGACGGATTTTTGGATGTGGGTCCGGCGATGGGGCGGCGCCGCCCGTTCAAGAACGGAGTATTCTTCATGGGGTTTCTGGGATGGTGGCGACGGTCTAACCGGGTTAGTGTTGGCTAACGGTCAAAAGCTTTCCAAATCGATACTCCGATGGACCGGGTTCGTGACACAGGACGACGTCCTCTACCCACACTTAACTGTCCGAGAAACTCTCATATTCTGCTCTCTCCTCCGACTACCTCTTTCCCTCTCAAAGCAAGACAAAGTCGCAGTGGCCGAGTCAGTGATCGTCGAGCTCGGGCTAACGAAATGCCAAAACACAATCATCGGAAACGCCTTCATCCGTGGCGTCTCGGGTGGAGAACGAAAAAGAGTGAGCATAGGCCACGAGATGCTCATAAACCCAAGCCTACTAATTCTCGACGAGCCGACATCAGGGCTAGACTCAACCGCAGCGCACCGGCTGGTGACCACCATGGCTGCGCTGGCTCACAAGGGGAAGACCATAGTGACCTCAATTCACCAACCATCGAGCCGGGTGTACCAAACCTTTGACAAGGTGCTGGTGCTGTCGGAAGGGCGATGCTTGTATTATGGGAAAGAACCCAGCTGATTTTCTCCTCGATCTCGCCAATGGTGTATACCAAGTTGAAAATACAAGTGAAGGAGAGAAACCCAACATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCTCTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATCACTGCGG ATGCCTTCTTTTGTTGGTGGAGCTCAAGCTAAAGATGTCTCTTCTCTTCACCTTCCTTCTTCCTCTTCTTGTCGTCCTCTTACTCTTAAGTTTGTAGATGTGAGTTATCGAGTGAAGGTGACGAACAAGAGTGGAAATACTATTGGACGGATTTTTGGATGTGGGTCCGGCGATGGGGCGGCGCCGCCCGTTCAAGAACGGAGTATTCTTCATGGGGTTTCTGGGATGGTGGCGACGGTCTAA MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVATV
BLAST of Carg23300-RA vs. NCBI nr
Match: XP_023535221.1 (ABC transporter G family member 25-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 157.5 bits (397), Expect = 1.9e-35 Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Carg23300-RA vs. NCBI nr
Match: XP_022936361.1 (ABC transporter G family member 25-like [Cucurbita moschata]) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Carg23300-RA vs. NCBI nr
Match: XP_022976378.1 (ABC transporter G family member 25-like [Cucurbita maxima]) HSP 1 Score: 142.5 bits (358), Expect = 6.2e-31 Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of Carg23300-RA vs. NCBI nr
Match: XP_004139680.2 (PREDICTED: ABC transporter G family member 25 isoform X1 [Cucumis sativus] >KGN44483.1 hypothetical protein Csa_7G307400 [Cucumis sativus]) HSP 1 Score: 114.4 bits (285), Expect = 1.8e-22 Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of Carg23300-RA vs. NCBI nr
Match: XP_008461920.1 (PREDICTED: ABC transporter G family member 25 isoform X1 [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 9.9e-21 Identity = 61/82 (74.39%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of Carg23300-RA vs. TAIR10
Match: AT1G71960.1 (ATP-binding casette family G25) HSP 1 Score: 47.0 bits (110), Expect = 6.4e-06 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of Carg23300-RA vs. Swiss-Prot
Match: sp|Q84TH5|AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana OX=3702 GN=ABCG25 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.2e-04 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of Carg23300-RA vs. TrEMBL
Match: tr|A0A0A0K4U8|A0A0A0K4U8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307400 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22 Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of Carg23300-RA vs. TrEMBL
Match: tr|A0A1S3CGA3|A0A1S3CGA3_CUCME (ABC transporter G family member 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500408 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 6.5e-21 Identity = 61/82 (74.39%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of Carg23300-RA vs. TrEMBL
Match: tr|A0A2H5NHW2|A0A2H5NHW2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_046180 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Carg23300-RA vs. TrEMBL
Match: tr|A0A067GVY5|A0A067GVY5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0057542mg PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.1e-07 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Carg23300-RA vs. TrEMBL
Match: tr|A0A1S4E3I9|A0A1S4E3I9_CUCME (ABC transporter G family member 25 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500408 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.0e-07 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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