Carg23300 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23300
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ABC transporter G family member 25
Location	Cucurbita_argyrosperma_scaffold_188 : 104826 .. 108907 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTATATAGTTCCCCAAAAAATGCCTTCTTTTGTTGGTGGAGCTCAAGCTAAAGATGTCTCTTCTCTTCACCTTCCTTCTTCCTCTTCTTGTCGTCCTCTTACTCTTAAGGTATGGATGTTTCGGGGTGAGCTTCAAATTTTGTTCCATGTTTGGATGTGTTTTTTTGTGATGATTTTTCCGTGTTTGTAGTTTGTAGATGTGAGTTATCGAGTGAAGGTGACGAACAAGAGTGGAAATACTATTGGACGGATTTTTGGATGTGGGTCCGGCGATGGGGCGGCGCCGCCCGTTCAAGAACGGAGTATTCTTCATGGGGTTTCTGGGATGGTGTCGCCGGGAGAGACTTTGGCCATTCTTGGCCCGTCCGGAAGTGGCAAGTCAACTCTTCTTAATGCTCTTGCTGGAAGATTACAGGTCATATTTAGCCTTGAACTATGATTTACCATAATATATATCATATTTGCCTTCTATTACGGTTTAACATAGATATCATATTTGATCTTTTATTATATATAAATATCTGGTATGATATTTAACTTTCAATTACTTTTTACCCTAAGTATTATATTTGCCCTTTTATTATAGACAAATATCTCGTGTGATTGAGGATATTTCACATTTAATCGTAAATATTATATTCGATCATTTATTATATACAAATATCTTTCATTGTGGTTTTTCGTAGTCAAATATTTTAAATATAATCCTCATTTTCTTTGTAATTTATTTGATTCTATAAAAAATATAGAATTTCCAAGTTTTAAAGAGTTAAAATAGACATTTTTAGGTAAAAAAGAGGTATGACCCTCTTATATTGATAACAGGGCGACGGTCTAACCGGGTTAGTGTTGGCTAACGGTCAAAAGCTTTCCAAATCGATACTCCGATGGACCGGGTTCGTGACACAGGACGACGTCCTCTACCCACACTTAACTGTCCGAGAAACTCTCATATTCTGCTCTCTCCTCCGACTACCTCTTTCCCTCTCAAAGCAAGACAAAGTCGCAGTGGCCGAGTCAGTGATCGTCGAGCTCGGGCTAACGAAATGCCAAAACACAATCATCGGAAACGCCTTCATCCGTGGCGTCTCGGGTGGAGAACGAAAAAGAGTGAGCATAGGCCACGAGATGCTCATAAACCCAAGCCTACTAATTCTCGACGAGCCGACATCAGGGCTAGACTCAACCGCAGCGCACCGGCTGGTGACCACCATGGCTGCGCTGGCTCACAAGGGGAAGACCATAGTGACCTCAATTCACCAACCATCGAGCCGGGTGTACCAAACCTTTGACAAGGTGCTGGTGCTGTCGGAAGGGCGATGCTTGTATTATGGGAAAGGAAGTGAAGCAATGAGCTATTTTGAGTCTATTGGGTTCACACCTTCTTTTCCCATGAACCCAGCTGATTTTCTCCTCGATCTCGCCAATGGTACGTATTTTTTTTTTTAATTTATTTTCTTCATATCGTATTTAAATCTTCATTAATTTTTTTATTTATCAATAATTTAACTTTGATTAGGAGCTAATTAACCATGGAAAATCACATTAAGCTTTTAGGTTGATTTTAAAATTTTCATTTTTTTTTTTTACTAATTAATTCTTGGGTCTAAAAATTATTAATTTAACTTTTTTTTTTTAATAAATTAGTGAATATTGTGTTCATTATCCACGAGGAACTTTTTAGGGTTTCTTTCACAACCACCTTTAAAAAAGAAAAAAGAAAATATTAATAATCTTTTCTTTAATTGTTCTTTGTCTATAATTTTAATGAAAATTTAGAGGAAAAAGAAGGTGGGTCGAGAGTATTATGGTAAATAAGGTAAATAAGTGTTTATTCTAACACTATAATCAGTAAAATATATCTAAACTAATTGAGCTATACTTAAATTGATATTAAAATTTTATTTTCATTACTTAAATTGATATTAAAAATGTATTTAATGAAAATAAAATAATAAAAAGAAAGAGACAGAAAATTAAATTCTCATCTCATAAAATATCAGAAGCCTGAAATGACCATAAAATAGGGGACCGACCTCCTCATTAAAATGCAAGCTGTCAAAAAAGAGAGTCCTCAATTATCTATATATATATATATATATATAGATATAGATAGGATGGCAAGTGAGTTGGAAAAATATTAATAAATTAGATATGTTTATTAACCTGTGGAGTCGGATTCGTGGGAACCCACTTCAAATAGGATGAGAAATCTAGGATTAAGTTGGGAATAGAAACGAGGGTGAGGAGAGATTTCTACTTGTTAAGTAAATAAGGATGGAGACGGTACCTGTAGAAAATCTCCATTTTGATACTCATAAAAATAAATAAAAAATTTTGTAGGGATAGAAGTTGACATAGGAGACGGGAACAGGAACAAGGAAAGGCTTGTTCTTGTCCCCATTCCTTGAACGTCTCTAAAGACAACATACTTAGATTTACCTTAAATCCATCAAATCACCTTCCTCCGTCTAACAAAAACCACAACTTTTGAAAACAAATCTCCACAACTTTTAATCCTTAAAGGGTTGTTTTTCCTTTTGTTTTTGCCTTTTAAAAGGTCTCTAAAGAGATAAATATTTCAAACCCCTTTGTGGAGAATAAAGCCTAAGAGAGATTTTCCCCCTTTCTTAATGTGGTTAGGAATCATATGTGAGAGAGGATACAAAGTAAAACATTAATGTGTTGGAGACATACATATATAAATATATAATATGCTTTTGAAAACCATGATTATAAAGTGCGGGAAGGTTTCGATTTGGCAATTTTTAGTGCATAATGGATCCCGTTCTTAATTACTTTTTAAAATATAATATCAGATTCAAATTTACATCTCTTATATTTGATTCGTTTAGGGTTTAGGGTTTAGGTTTACGTTGATTTTTTTAATATTGGAAGAAGTAGATTAGGGTAGACACGTGTCGAGTAGGGCGACATGTGTAGGACTGAGATTTTGCAGTCCCATTGGGATATAATGATAGCATTTTGGAATGGGCATGATGGGCGCCCAAAGTGCTTGGTGGAAGGCACCAACCATTAGTGGAACTCTTGCCTTTACCACCAACAATGGTCAATGTTTTTTTCAAAAGAGTTATGGCTGTTCCTTATTTTAAATGTTTTTTTTTTCATTTCTTTTTTGGTATATTTAATATTTAATGCTTTTGTGTTCATGGGAAATAAATTATTAAGATAGTTATATAATGGGAAACATCCCGTTTTAGAATCTACACGTGCATGCATTTTAAGGGTCTTTCTTTAGTCCTTTAAATAGGAGTGTTCATGGTTGGTCGGGAGGCTAAGACTATAGTGTACTTCGTTCTAGGGGAGGATTGTTGGGAGGGAGTCCCACATTGGCTCCACGTTGGATAATTCTCAAATGTCAAACAAAGAAGTTGTGAACCTCGAAAGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAATGGTGTACTTTGTTCGAGAACTCCAAAGAAGTCGAGCCTCGATTGAGGGGAGGCTGTTCGAGGGCTCCATAGGCCTCAGGAGAAGCTATAGTGTTCTTTGTTCGAATGGAGAATTGTTGGGAGGGAGTCCCACATTGGCTAATTTAGGGAAATGATCATGGGTTTATAAGTAAGGAATACATCTCTATTGATAGGAGACCTTTTGGGAAAGCCCAAAACAAAGTCATGAGAGGTTATACTCACAGTGAACAATATCATACCATTGTAGAGAGTCGTGATTCCTAACCTGAGTTGATCAATTTTGAATAGTGAAAATAAAGTTGTAGTTTTGGTGTGGTATGTGAATTTAGAAGTTGATTTTGTGTTATTTTCATGCATGTAGGTGTATACCAAGTTGAAAATACAAGTGAAGGAGAGAAACCCAACATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCTCTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATCACTGCGG

mRNA sequence

CTTTATATAGTTCCCCAAAAAATGCCTTCTTTTGTTGGTGGAGCTCAAGCTAAAGATGTCTCTTCTCTTCACCTTCCTTCTTCCTCTTCTTGTCGTCCTCTTACTCTTAAGTTTGTAGATGTGAGTTATCGAGTGAAGGTGACGAACAAGAGTGGAAATACTATTGGACGGATTTTTGGATGTGGGTCCGGCGATGGGGCGGCGCCGCCCGTTCAAGAACGGAGTATTCTTCATGGGGTTTCTGGGATGGTGGCGACGGTCTAACCGGGTTAGTGTTGGCTAACGGTCAAAAGCTTTCCAAATCGATACTCCGATGGACCGGGTTCGTGACACAGGACGACGTCCTCTACCCACACTTAACTGTCCGAGAAACTCTCATATTCTGCTCTCTCCTCCGACTACCTCTTTCCCTCTCAAAGCAAGACAAAGTCGCAGTGGCCGAGTCAGTGATCGTCGAGCTCGGGCTAACGAAATGCCAAAACACAATCATCGGAAACGCCTTCATCCGTGGCGTCTCGGGTGGAGAACGAAAAAGAGTGAGCATAGGCCACGAGATGCTCATAAACCCAAGCCTACTAATTCTCGACGAGCCGACATCAGGGCTAGACTCAACCGCAGCGCACCGGCTGGTGACCACCATGGCTGCGCTGGCTCACAAGGGGAAGACCATAGTGACCTCAATTCACCAACCATCGAGCCGGGTGTACCAAACCTTTGACAAGGTGCTGGTGCTGTCGGAAGGGCGATGCTTGTATTATGGGAAAGAACCCAGCTGATTTTCTCCTCGATCTCGCCAATGGTGTATACCAAGTTGAAAATACAAGTGAAGGAGAGAAACCCAACATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCTCTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATCACTGCGG

Coding sequence (CDS)

ATGCCTTCTTTTGTTGGTGGAGCTCAAGCTAAAGATGTCTCTTCTCTTCACCTTCCTTCTTCCTCTTCTTGTCGTCCTCTTACTCTTAAGTTTGTAGATGTGAGTTATCGAGTGAAGGTGACGAACAAGAGTGGAAATACTATTGGACGGATTTTTGGATGTGGGTCCGGCGATGGGGCGGCGCCGCCCGTTCAAGAACGGAGTATTCTTCATGGGGTTTCTGGGATGGTGGCGACGGTCTAA

Protein sequence

MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVATV

Homology

[Close]

BLAST of Carg23300 vs. NCBI nr
Match: XP_023535221.1 (ABC transporter G family member 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-35
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGA 60
          MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGA
Sbjct: 1  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGA 60

Query: 61 APPVQERSILHGVSGMVA 79
          APPVQERSILHGVSGMV+
Sbjct: 61 APPVQERSILHGVSGMVS 78

[Close]

BLAST of Carg23300 vs. NCBI nr
Match: XP_022936361.1 (ABC transporter G family member 25-like [Cucurbita moschata])

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGA 60
          MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGA
Sbjct: 1  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGA 60

Query: 61 APPVQERSILHGVSGMVA 79
          AP VQERSILHGVSGMV+
Sbjct: 61 APSVQERSILHGVSGMVS 78

[Close]

BLAST of Carg23300 vs. NCBI nr
Match: XP_022976378.1 (ABC transporter G family member 25-like [Cucurbita maxima])

HSP 1 Score: 142.5 bits (358), Expect = 6.2e-31
Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MPSFVGGAQAKDVSSLHLPSSSSCRPLTLKFVDVSYRVKVTNKSGNTIGRIFGCGSGDGA 60
          MPSFVGGAQAKDVSSLHLPS SS RPLTLKFVDVSYRVKVTNKSGNTIGRIF CGS DGA
Sbjct: 1  MPSFVGGAQAKDVSSLHLPSPSSSRPLTLKFVDVSYRVKVTNKSGNTIGRIFRCGSSDGA 60

Query: 61 APPVQERSILHGVSGMVA 79
          AP VQERSILHGVSGMV+
Sbjct: 61 APLVQERSILHGVSGMVS 78

[Close]

BLAST of Carg23300 vs. NCBI nr
Match: XP_004139680.2 (PREDICTED: ABC transporter G family member 25 isoform X1 [Cucumis sativus] >KGN44483.1 hypothetical protein Csa_7G307400 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-22
Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 1  MPSFVGGAQAKDVSSLHLPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGSG 60
          MPSFV   Q KD SSLHLPS  SSS  PLTLKFVDVSYRVK+ +K SGN IGRI GCGS 
Sbjct: 1  MPSFVAETQPKDPSSLHLPSLVSSSSLPLTLKFVDVSYRVKMADKSSGNAIGRILGCGSS 60

Query: 61 DGAAPPVQERSILHGVSGMVA 79
          DG+ PPVQERSILHGV+GMV+
Sbjct: 61 DGSPPPVQERSILHGVTGMVS 81

[Close]

BLAST of Carg23300 vs. NCBI nr
Match: XP_008461920.1 (PREDICTED: ABC transporter G family member 25 isoform X1 [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 9.9e-21
Identity = 61/82 (74.39%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 1  MPSFVGGAQAKDVSSLH-LPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGS 60
          MPSFV   Q KD SSLH LPS  SSS  PLTLKFVDVSYRVK+ +K SGN IGRIFGC S
Sbjct: 1  MPSFVAETQPKDPSSLHGLPSLVSSSSLPLTLKFVDVSYRVKMADKSSGNAIGRIFGCVS 60

Query: 61 GDGAAPPVQERSILHGVSGMVA 79
           DG+ PPVQERSILHGV+GMV+
Sbjct: 61 SDGSPPPVQERSILHGVTGMVS 82

[Close]

BLAST of Carg23300 vs. TAIR10
Match: AT1G71960.1 (ATP-binding casette family G25)

HSP 1 Score: 47.0 bits (110), Expect = 6.4e-06
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 21 SSSCRPLTLKFVDVSYRVKVTNKSGNT--IGRIFGC-GSGDGAAPPVQERSILHGVSGMV 79
          SSSC P+TLKFVDV YRVK+   S ++  I ++ G            +ER+IL GV+GM+
Sbjct: 32 SSSCFPITLKFVDVCYRVKIHGMSNDSCNIKKLLGLKQKPSDETRSTEERTILSGVTGMI 91

[Close]

BLAST of Carg23300 vs. Swiss-Prot
Match: sp|Q84TH5|AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana OX=3702 GN=ABCG25 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-04
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 21 SSSCRPLTLKFVDVSYRVKVTNKSGNT--IGRIFGC-GSGDGAAPPVQERSILHGVSGMV 79
          SSSC P+TLKFVDV YRVK+   S ++  I ++ G            +ER+IL GV+GM+
Sbjct: 32 SSSCFPITLKFVDVCYRVKIHGMSNDSCNIKKLLGLKQKPSDETRSTEERTILSGVTGMI 91

[Close]

BLAST of Carg23300 vs. TrEMBL
Match: tr|A0A0A0K4U8|A0A0A0K4U8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307400 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22
Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 1  MPSFVGGAQAKDVSSLHLPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGSG 60
          MPSFV   Q KD SSLHLPS  SSS  PLTLKFVDVSYRVK+ +K SGN IGRI GCGS 
Sbjct: 1  MPSFVAETQPKDPSSLHLPSLVSSSSLPLTLKFVDVSYRVKMADKSSGNAIGRILGCGSS 60

Query: 61 DGAAPPVQERSILHGVSGMVA 79
          DG+ PPVQERSILHGV+GMV+
Sbjct: 61 DGSPPPVQERSILHGVTGMVS 81

[Close]

BLAST of Carg23300 vs. TrEMBL
Match: tr|A0A1S3CGA3|A0A1S3CGA3_CUCME (ABC transporter G family member 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500408 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.5e-21
Identity = 61/82 (74.39%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 1  MPSFVGGAQAKDVSSLH-LPS--SSSCRPLTLKFVDVSYRVKVTNK-SGNTIGRIFGCGS 60
          MPSFV   Q KD SSLH LPS  SSS  PLTLKFVDVSYRVK+ +K SGN IGRIFGC S
Sbjct: 1  MPSFVAETQPKDPSSLHGLPSLVSSSSLPLTLKFVDVSYRVKMADKSSGNAIGRIFGCVS 60

Query: 61 GDGAAPPVQERSILHGVSGMVA 79
           DG+ PPVQERSILHGV+GMV+
Sbjct: 61 SDGSPPPVQERSILHGVTGMVS 82

[Close]

BLAST of Carg23300 vs. TrEMBL
Match: tr|A0A2H5NHW2|A0A2H5NHW2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_046180 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 9   QAKDVSS----LH-LPS-SSSCRPLTLKFVDVSYRVKVTNKS--GNTIGRIFGCGS---- 68
           Q+KD S     LH LPS  SSC P+TLKF+DV YR+K+ NKS  G++  RIF  GS    
Sbjct: 20  QSKDCSPARDLLHQLPSLMSSCYPITLKFIDVCYRIKIENKSKEGSSFRRIFNRGSTSST 79

Query: 69  -GDGAAPPVQERSILHGVSGMVA 79
              G+   +QER+IL+G++GMV+
Sbjct: 80  DDQGSTAKIQERTILNGITGMVS 102

[Close]

BLAST of Carg23300 vs. TrEMBL
Match: tr|A0A067GVY5|A0A067GVY5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0057542mg PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-07
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 18  LPS-SSSCRPLTLKFVDVSYRVKVTNKS--GNTIGRIFGCGS-----GDGAAPPVQERSI 77
           LPS  SSC P+TLKF+DV YR+K+ NKS  G++  RIF  GS       G+   +QER+I
Sbjct: 34  LPSLMSSCYPITLKFIDVCYRIKIENKSKEGSSFRRIFNRGSTSSTDDQGSTAKIQERTI 93

Query: 78  LHGVSGMVA 79
           L+G++GMV+
Sbjct: 94  LNGITGMVS 102

[Close]

BLAST of Carg23300 vs. TrEMBL
Match: tr|A0A1S4E3I9|A0A1S4E3I9_CUCME (ABC transporter G family member 25 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500408 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.0e-07
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 44 SGNTIGRIFGCGSGDGAAPPVQERSILHGVSGMVA 79
          SGN IGRIFGC S DG+ PPVQERSILHGV+GMV+
Sbjct: 6  SGNAIGRIFGCVSSDGSPPPVQERSILHGVTGMVS 40

The following BLAST results are available for this feature:

BLAST of Carg23300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535221.1	1.9e-35	98.72	ABC transporter G family member 25-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936361.1	1.6e-34	97.44	ABC transporter G family member 25-like [Cucurbita moschata]	[more]
XP_022976378.1	6.2e-31	92.31	ABC transporter G family member 25-like [Cucurbita maxima]	[more]
XP_004139680.2	1.8e-22	75.31	PREDICTED: ABC transporter G family member 25 isoform X1 [Cucumis sativus] >KGN4...	[more]
XP_008461920.1	9.9e-21	74.39	PREDICTED: ABC transporter G family member 25 isoform X1 [Cucumis melo]	[more]

BLAST of Carg23300 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71960.1	6.4e-06	44.26	ATP-binding casette family G25	[more]

BLAST of Carg23300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84TH5\|AB25G_ARATH	1.2e-04	44.26	ABC transporter G family member 25 OS=Arabidopsis thaliana OX=3702 GN=ABCG25 PE=...	[more]

BLAST of Carg23300 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4U8\|A0A0A0K4U8_CUCSA	1.2e-22	75.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307400 PE=4 SV=1	[more]
tr\|A0A1S3CGA3\|A0A1S3CGA3_CUCME	6.5e-21	74.39	ABC transporter G family member 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A2H5NHW2\|A0A2H5NHW2_CITUN	1.1e-07	49.40	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_046180 PE=4 SV=1	[more]
tr\|A0A067GVY5\|A0A067GVY5_CITSI	3.1e-07	50.72	Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0057542...	[more]
tr\|A0A1S4E3I9\|A0A1S4E3I9_CUCME	7.0e-07	80.00	ABC transporter G family member 25 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23300-RA	Carg23300-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23300	CsGy7G011840	Cucumber (Gy14) v2	carcgybB0291

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23300	Cucumber (Gy14) v2	carcgybB0290
Carg23300	Cucumber (Gy14) v1	carcgyB0324
Carg23300	Cucurbita maxima (Rimu)	carcmaB0382
Carg23300	Cucurbita maxima (Rimu)	carcmaB0384
Carg23300	Cucurbita moschata (Rifu)	carcmoB0382
Carg23300	Cucurbita moschata (Rifu)	carcmoB0380
Carg23300	Cucurbita pepo (Zucchini)	carcpeB0388
Carg23300	Cucurbita pepo (Zucchini)	carcpeB0386
Carg23300	Wild cucumber (PI 183967)	carcpiB0307
Carg23300	Cucumber (Chinese Long) v2	carcuB0303
Carg23300	Cucumber (Chinese Long) v3	carcucB0306
Carg23300	Bottle gourd (USVL1VR-Ls)	carlsiB248
Carg23300	Melon (DHL92) v3.5.1	carmeB0276
Carg23300	Melon (DHL92) v3.6.1	carmedB0288
Carg23300	Watermelon (Charleston Gray)	carwcgB0267
Carg23300	Watermelon (97103) v1	carwmB0266
Carg23300	Watermelon (97103) v2	carwmbB0284
Carg23300	Wax gourd	carwgoB0360