Carg21301-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21301-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	BTB/POZ domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_128 : 256914 .. 257789 (-)
Sequence length	876

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACACTGCCCAGTGTCGAATTTGCAGATTTGAGTCCCACAAAAGATGTTTTTGTTTCAGCTCTCCGCTTTGCTCTGTCAATTAACAGCCCATGTGTGCCATTTGGAGATGAGCTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGGTAAGAGCAGACGCCGATACGTCGTTGGTAATAACTGACGACGAAGTAAAATCCGTGTTGAGAATGGGTCTTTCTAGAACTTGTGCATCGTTTCAGACAGATCTATCTTCACTACTTTTGGAGTCTGACCTTACATCTCAAGTCAACGAAGACAAGCTATTGAGAACACTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAATTTAATGAAAGACTTCGTTTCCAACTGGATCGAGATATCTGGGAACGTACTGAAGGTCATCGAGGACGAAAAGTTAAATTCCTTAATGTGGGGTTTGAAGGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACTGTGATTCTTCCTGCACCGTACCGGTTGTCACTGCTTCAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTCGATTCAAAGTGCGTCGCAGAGACAGATTTTCGTTACAAGATGGACGACGAGCTGTGCTTGAATATCGAGGGGGCAATTGTTTCCATGGTATTGACATTGCCTTCAAATGATCAAGCAGGTATCTTGGTAGACTGGATGAAAGCAGAGGAAATGCAGTATCCTGATTTAACTGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCCCTGACAATGATGATGCTGCAATCAGCTTTTGA

mRNA sequence

ATGTCGACACTGCCCAGTGTCGAATTTGCAGATTTGAGTCCCACAAAAGATGTTTTTGTTTCAGCTCTCCGCTTTGCTCTGTCAATTAACAGCCCATGTGTGCCATTTGGAGATGAGCTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGGTAAGAGCAGACGCCGATACGTCGTTGGTAATAACTGACGACGAAGTAAAATCCGTGTTGAGAATGGGTCTTTCTAGAACTTGTGCATCGTTTCAGACAGATCTATCTTCACTACTTTTGGAGTCTGACCTTACATCTCAAGTCAACGAAGACAAGCTATTGAGAACACTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAATTTAATGAAAGACTTCGTTTCCAACTGGATCGAGATATCTGGGAACGTACTGAAGGTCATCGAGGACGAAAAGTTAAATTCCTTAATGTGGGGTTTGAAGGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACTGTGATTCTTCCTGCACCGTACCGGTTGTCACTGCTTCAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTCGATTCAAAGTGCGTCGCAGAGACAGATTTTCGTTACAAGATGGACGACGAGCTGTGCTTGAATATCGAGGGGGCAATTGTTTCCATGGTATTGACATTGCCTTCAAATGATCAAGCAGGTATCTTGGTAGACTGGATGAAAGCAGAGGAAATGCAGTATCCTGATTTAACTGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCCCTGACAATGATGATGCTGCAATCAGCTTTTGA

Coding sequence (CDS)

ATGTCGACACTGCCCAGTGTCGAATTTGCAGATTTGAGTCCCACAAAAGATGTTTTTGTTTCAGCTCTCCGCTTTGCTCTGTCAATTAACAGCCCATGTGTGCCATTTGGAGATGAGCTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGGTAAGAGCAGACGCCGATACGTCGTTGGTAATAACTGACGACGAAGTAAAATCCGTGTTGAGAATGGGTCTTTCTAGAACTTGTGCATCGTTTCAGACAGATCTATCTTCACTACTTTTGGAGTCTGACCTTACATCTCAAGTCAACGAAGACAAGCTATTGAGAACACTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAATTTAATGAAAGACTTCGTTTCCAACTGGATCGAGATATCTGGGAACGTACTGAAGGTCATCGAGGACGAAAAGTTAAATTCCTTAATGTGGGGTTTGAAGGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACTGTGATTCTTCCTGCACCGTACCGGTTGTCACTGCTTCAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTCGATTCAAAGTGCGTCGCAGAGACAGATTTTCGTTACAAGATGGACGACGAGCTGTGCTTGAATATCGAGGGGGCAATTGTTTCCATGGTATTGACATTGCCTTCAAATGATCAAGCAGGTATCTTGGTAGACTGGATGAAAGCAGAGGAAATGCAGTATCCTGATTTAACTGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCCCTGACAATGATGATGCTGCAATCAGCTTTTGA

Protein sequence

MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSLVITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPKMNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYRLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGILVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDNDDAAISF

Homology

[Close]

BLAST of Carg21301-RA vs. NCBI nr
Match: XP_022929149.1 (BTB/POZ domain-containing protein At3g05675 [Cucurbita moschata])

HSP 1 Score: 571.6 bits (1472), Expect = 1.5e-159
Identity = 288/291 (98.97%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYM+RADADTSL
Sbjct: 9   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMIRADADTSL 68

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK
Sbjct: 69  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 128

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY
Sbjct: 129 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 188

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLLQFWLPYIRKMKPLLDSKCVAETDF YKMDDELCLNIEGAIVSMVLTLPSNDQAGI
Sbjct: 189 RLSLLQFWLPYIRKMKPLLDSKCVAETDFSYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 248

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDNDDAAISF 292
           LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGAC DNDDAAISF
Sbjct: 249 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACSDNDDAAISF 299

[Close]

BLAST of Carg21301-RA vs. NCBI nr
Match: XP_023520561.1 (BTB/POZ domain-containing protein At3g05675 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 571.2 bits (1471), Expect = 2.0e-159
Identity = 288/291 (98.97%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MSTLPSV+FADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL
Sbjct: 5   MSTLPSVKFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 64

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VITDDEVKSVLRMGLSRTCASFQTDLSSLL ESDLTSQVNEDKLLRTLSDLEWICSLLPK
Sbjct: 65  VITDDEVKSVLRMGLSRTCASFQTDLSSLLFESDLTSQVNEDKLLRTLSDLEWICSLLPK 124

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY
Sbjct: 125 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 184

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI
Sbjct: 185 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 244

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDNDDAAISF 292
           LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGAC DNDDAAISF
Sbjct: 245 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACSDNDDAAISF 295

[Close]

BLAST of Carg21301-RA vs. NCBI nr
Match: XP_022970078.1 (BTB/POZ domain-containing protein At3g05675 [Cucurbita maxima])

HSP 1 Score: 563.1 bits (1450), Expect = 5.3e-157
Identity = 285/291 (97.94%), Postives = 286/291 (98.28%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MSTLPSV+FADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADA TSL
Sbjct: 1   MSTLPSVKFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADAGTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESD TSQV EDKLLRTLSDLEWICSLLPK
Sbjct: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDFTSQVIEDKLLRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYG VILPAPY
Sbjct: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGAVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI
Sbjct: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDNDDAAISF 292
           LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGAC DNDDAAISF
Sbjct: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACSDNDDAAISF 291

[Close]

BLAST of Carg21301-RA vs. NCBI nr
Match: XP_011654681.1 (PREDICTED: BTB/POZ domain-containing protein At3g05675 [Cucumis sativus] >KGN49994.1 hypothetical protein Csa_5G148650 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 3.4e-143
Identity = 257/292 (88.01%), Postives = 271/292 (92.81%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MS LPS +FADLSPTKDVFVSAL FALSINSPC PFGDELQRSAQEQVDYM+RADADTSL
Sbjct: 1   MSILPSAKFADLSPTKDVFVSALGFALSINSPCAPFGDELQRSAQEQVDYMLRADADTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VI DDEVKSVL+ GL RTC SF+ +LSSLLLE DL SQ  EDK+LRTLSDLEWICSLLPK
Sbjct: 61  VIKDDEVKSVLKTGLFRTCRSFERELSSLLLEPDLASQAKEDKILRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFV NWIEISGN+LKVIEDEKLNSLMWGLK+KLIEMTNKALEAVGYGTVILPAPY
Sbjct: 121 MNLMKDFVYNWIEISGNILKVIEDEKLNSLMWGLKLKLIEMTNKALEAVGYGTVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL LPSNDQAGI
Sbjct: 181 RLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAISF 292
           L DWMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  ISF
Sbjct: 241 LADWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF 292

[Close]

BLAST of Carg21301-RA vs. NCBI nr
Match: XP_008437433.1 (PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo] >XP_008437434.1 PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo])

HSP 1 Score: 515.0 bits (1325), Expect = 1.7e-142
Identity = 256/292 (87.67%), Postives = 274/292 (93.84%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MS LPSV+FADLSPTK+VFVSAL FALSINSP  PFGDEL+RSAQEQV+YM+RADADTSL
Sbjct: 1   MSILPSVKFADLSPTKNVFVSALGFALSINSPSAPFGDELRRSAQEQVEYMLRADADTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VI DDEVKSVL+ GL RTC+SF+ +LSSLLLE DL SQ NEDK+LRTLSDLEWICSLLPK
Sbjct: 61  VIKDDEVKSVLKTGLFRTCSSFERELSSLLLEPDLASQANEDKILRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGN+LKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY
Sbjct: 121 MNLMKDFVSNWIEISGNILKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL LPSNDQAGI
Sbjct: 181 RLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAISF 292
           L +WMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  ISF
Sbjct: 241 LAEWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF 292

[Close]

BLAST of Carg21301-RA vs. TAIR10
Match: AT4G10800.1 (BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT3G05675.1))

HSP 1 Score: 211.8 bits (538), Expect = 5.5e-55
Identity = 118/271 (43.54%), Postives = 171/271 (63.10%), Query Frame = 0


Query: 15  TKDVFVSALRFALSI----NSPCVPFGDELQRSAQEQVDYMVRADADTSLVITDDEVKSV 74
           TK+VF+SAL FA+SI    NSP                                   KSV
Sbjct: 12  TKNVFLSALHFAMSIDTLKNSP--ELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSV 71

Query: 75  LRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPKMNLMKDFVSN 134
           +R+G+S   +     LSSLL+   +  +  E  +L+TL D+EW+C +LP+M LMKD V  
Sbjct: 72  VRLGISNVISMLLDRLSSLLV---ILPECTEFSVLKTLYDIEWLCKVLPRMELMKDLVVK 131

Query: 135 WIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYRLSLLQFWLP 194
           W + S  +L + +  +L+S + G+KVKL+E+T K LEAVGYG VI+P+  R  LL+ WLP
Sbjct: 132 WTDASSEILVIAQKCELDSRILGVKVKLVEVTGKILEAVGYGIVIVPSKSRTCLLKIWLP 191

Query: 195 YIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGILVDWMKA--- 254
           +IR++K L+D++     ++ Y+MD++LC  IEG++VS+VLTLPSNDQA +  +WM+    
Sbjct: 192 FIRRLKTLVDAE---GCEYEYRMDEDLCEFIEGSMVSLVLTLPSNDQAEVFGEWMRGIGL 251

Query: 255 EEMQYPDLTDAFELWCYRTKSAKRRLVEGID 279
           E +++PDL++AFE+WCYR+KSAKRRLVE  D
Sbjct: 252 EGVKFPDLSEAFEVWCYRSKSAKRRLVERCD 274

[Close]

BLAST of Carg21301-RA vs. TAIR10
Match: AT3G05675.2 (BTB/POZ domain-containing protein)

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-45
Identity = 109/286 (38.11%), Postives = 162/286 (56.64%), Query Frame = 0


Query: 4   LPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSLVIT 63
           L  ++  D S   ++FVSA RFA S  SP +  GD ++ SAQEQ++YM+  D D  L+I 
Sbjct: 159 LARLQPVDQSAVLEIFVSAFRFATS--SPPLLLGD-IKSSAQEQIEYMITEDDDAPLLIA 218

Query: 64  DDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLR-TLSDLEWICSLLPKMN 123
           D+EVK  ++  +      F   L  + L+   +  +N+    R  LSD+ W+  +L KM 
Sbjct: 219 DEEVKLEVKQCVKSLFVRFFQCLEEITLKPVESEVINKKGSFRMVLSDMCWVFQILTKME 278

Query: 124 LMKDFVSNWIEISGNVLKVIED-EKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYR 183
           +++DFV  W +IS  ++KV+E                          +GYGTVILP   R
Sbjct: 279 VVRDFVITWADISEKLVKVVEQXXXXXXXXXXXXXXXXXXXXXXXXXIGYGTVILPTAKR 338

Query: 184 LSLLQFWLPYIRKMKPLLDSKCVAETD---FRYKMDDELCLNIEGAIVSMVLTLPSNDQA 243
           L +++ WLP++R  KPL+DS    + +    RYK+D E+   +E + VS++L LPS DQA
Sbjct: 339 LQMVKLWLPFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESSFVSIILALPSADQA 398

Query: 244 GILVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN 285
            IL +W+    + YPDLT+AFE+WCYR+K AKRRL  G+ G   +N
Sbjct: 399 EILTEWLSKNGL-YPDLTEAFEVWCYRSKVAKRRL--GLVGGEEEN 438

[Close]

BLAST of Carg21301-RA vs. TAIR10
Match: AT1G63850.1 (BTB/POZ domain-containing protein)

HSP 1 Score: 42.4 bits (98), Expect = 5.7e-04
Identity = 44/181 (24.31%), Postives = 75/181 (41.44%), Query Frame = 0


Query: 92  ESDLTSQVNEDKLLRTLSDLEWICSLLPKMNLMKDFVSNWIEISGNVLKVIEDEKLNSLM 151
           ESDL    N D++ R   +L WI  +L    + +DF+  W  +S       E  +++S +
Sbjct: 366 ESDLE---NVDQIARQADNLHWILDILIDRQIAEDFIVMWASLS-------ELSEVHSKV 425

Query: 152 WGL-KVKLIEMTNKALEAVGYGTVILPAPYRLSLLQFWLPYIRKMKPLLDSKCVAETDFR 211
             + + ++  +T +    +G G ++ P   R  LL+ WL       P  D       DF 
Sbjct: 426 PVVHRFEISRVTARIFVGIGKGQILTPKEVRCLLLRNWL------TPFYD-------DFG 485

Query: 212 YKMDDELCLN---IEGAIVSMVLTLPSNDQAGILVDWMKA---EEMQYPDLTDAFELWCY 266
           +       L+   IE  + + +LTLP   Q    + W           P++   FE+W  
Sbjct: 486 WMRRASKGLDRYLIEDGLSNTILTLPLAWQQEFFLAWFDRFLNSNEDCPNIQRGFEVWWR 523

[Close]

BLAST of Carg21301-RA vs. Swiss-Prot
Match: sp|Q8RX01|Y3567_ARATH (BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=At3g05675 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 5.4e-44
Identity = 109/286 (38.11%), Postives = 162/286 (56.64%), Query Frame = 0


Query: 4   LPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSLVIT 63
           L  ++  D S   ++FVSA RFA S  SP +  GD ++ SAQEQ++YM+  D D  L+I 
Sbjct: 159 LARLQPVDQSAVLEIFVSAFRFATS--SPPLLLGD-IKSSAQEQIEYMITEDDDAPLLIA 218

Query: 64  DDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLR-TLSDLEWICSLLPKMN 123
           D+EVK  ++  +      F   L  + L+   +  +N+    R  LSD+ W+  +L KM 
Sbjct: 219 DEEVKLEVKQCVKSLFVRFFQCLEEITLKPVESEVINKKGSFRMVLSDMCWVFQILTKME 278

Query: 124 LMKDFVSNWIEISGNVLKVIED-EKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYR 183
           +++DFV  W +IS  ++KV+E                          +GYGTVILP   R
Sbjct: 279 VVRDFVITWADISEKLVKVVEQXXXXXXXXXXXXXXXXXXXXXXXXXIGYGTVILPTAKR 338

Query: 184 LSLLQFWLPYIRKMKPLLDSKCVAETD---FRYKMDDELCLNIEGAIVSMVLTLPSNDQA 243
           L +++ WLP++R  KPL+DS    + +    RYK+D E+   +E + VS++L LPS DQA
Sbjct: 339 LQMVKLWLPFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESSFVSIILALPSADQA 398

Query: 244 GILVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN 285
            IL +W+    + YPDLT+AFE+WCYR+K AKRRL  G+ G   +N
Sbjct: 399 EILTEWLSKNGL-YPDLTEAFEVWCYRSKVAKRRL--GLVGGEEEN 438

[Close]

BLAST of Carg21301-RA vs. TrEMBL
Match: tr|A0A0A0KMC5|A0A0A0KMC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148650 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.2e-143
Identity = 257/292 (88.01%), Postives = 271/292 (92.81%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MS LPS +FADLSPTKDVFVSAL FALSINSPC PFGDELQRSAQEQVDYM+RADADTSL
Sbjct: 1   MSILPSAKFADLSPTKDVFVSALGFALSINSPCAPFGDELQRSAQEQVDYMLRADADTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VI DDEVKSVL+ GL RTC SF+ +LSSLLLE DL SQ  EDK+LRTLSDLEWICSLLPK
Sbjct: 61  VIKDDEVKSVLKTGLFRTCRSFERELSSLLLEPDLASQAKEDKILRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFV NWIEISGN+LKVIEDEKLNSLMWGLK+KLIEMTNKALEAVGYGTVILPAPY
Sbjct: 121 MNLMKDFVYNWIEISGNILKVIEDEKLNSLMWGLKLKLIEMTNKALEAVGYGTVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL LPSNDQAGI
Sbjct: 181 RLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAISF 292
           L DWMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  ISF
Sbjct: 241 LADWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF 292

[Close]

BLAST of Carg21301-RA vs. TrEMBL
Match: tr|A0A1S3ATN5|A0A1S3ATN5_CUCME (BTB/POZ domain-containing protein At3g05675 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482849 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.1e-142
Identity = 256/292 (87.67%), Postives = 274/292 (93.84%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MS LPSV+FADLSPTK+VFVSAL FALSINSP  PFGDEL+RSAQEQV+YM+RADADTSL
Sbjct: 1   MSILPSVKFADLSPTKNVFVSALGFALSINSPSAPFGDELRRSAQEQVEYMLRADADTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VI DDEVKSVL+ GL RTC+SF+ +LSSLLLE DL SQ NEDK+LRTLSDLEWICSLLPK
Sbjct: 61  VIKDDEVKSVLKTGLFRTCSSFERELSSLLLEPDLASQANEDKILRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGN+LKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY
Sbjct: 121 MNLMKDFVSNWIEISGNILKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL LPSNDQAGI
Sbjct: 181 RLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAISF 292
           L +WMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  ISF
Sbjct: 241 LAEWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF 292

[Close]

BLAST of Carg21301-RA vs. TrEMBL
Match: tr|A0A1S4DT33|A0A1S4DT33_CUCME (BTB/POZ domain-containing protein At3g05675 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482849 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.9e-118
Identity = 214/242 (88.43%), Postives = 228/242 (94.21%), Query Frame = 0


Query: 51  MVRADADTSLVITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSD 110
           M+RADADTSLVI DDEVKSVL+ GL RTC+SF+ +LSSLLLE DL SQ NEDK+LRTLSD
Sbjct: 1   MLRADADTSLVIKDDEVKSVLKTGLFRTCSSFERELSSLLLEPDLASQANEDKILRTLSD 60

Query: 111 LEWICSLLPKMNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVG 170
           LEWICSLLPKMNLMKDFVSNWIEISGN+LKVIEDEKLNSLMWGLKVKLIEMTNKALEAVG
Sbjct: 61  LEWICSLLPKMNLMKDFVSNWIEISGNILKVIEDEKLNSLMWGLKVKLIEMTNKALEAVG 120

Query: 171 YGTVILPAPYRLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVL 230
           YGTVILPAPYRLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL
Sbjct: 121 YGTVILPAPYRLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVL 180

Query: 231 TLPSNDQAGILVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAI 290
            LPSNDQAGIL +WMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  I
Sbjct: 181 ALPSNDQAGILAEWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTI 240

Query: 291 SF 292
           SF
Sbjct: 241 SF 242

[Close]

BLAST of Carg21301-RA vs. TrEMBL
Match: tr|F6HU59|F6HU59_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g02270 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.4e-105
Identity = 188/278 (67.63%), Postives = 236/278 (84.89%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           M  +  ++  DLS T++VFVSA+RFA SI +PC+PFGDEL+ SAQEQV+YM+  D DTSL
Sbjct: 145 MPIVARLQPVDLSTTRNVFVSAIRFATSIAAPCLPFGDELKTSAQEQVEYMLGEDEDTSL 204

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           +  DDEVK V++MGLS+ C+SF+ +LSSLLLESDLTS+  ED++LR+LSDLEW+C++LPK
Sbjct: 205 ITADDEVKLVVKMGLSQICSSFEKELSSLLLESDLTSEAVEDRVLRSLSDLEWMCNILPK 264

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           M+LMK+FVSNW EISG +L V+ED KL+SLMWGLKVKLIE+T K LEAVGYG VILP P 
Sbjct: 265 MDLMKEFVSNWTEISGRILTVVEDRKLDSLMWGLKVKLIEVTGKVLEAVGYGNVILPPPC 324

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           R+ LL+ WLPYIRKMKPLLDSK   +  F +KMD++LC +IEGAI+S++L LPSNDQA I
Sbjct: 325 RVQLLKTWLPYIRKMKPLLDSKGHEDLGFPHKMDEDLCESIEGAIISLILALPSNDQADI 384

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGID 279
           L DWMK E+++YPDL++AFE+WCYRTKSAKRRLVEG+D
Sbjct: 385 LADWMKTEQVRYPDLSEAFEVWCYRTKSAKRRLVEGLD 422

[Close]

BLAST of Carg21301-RA vs. TrEMBL
Match: tr|A0A2P5DJV4|A0A2P5DJV4_PARAD (BTB/POZ domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_057640 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 9.4e-102
Identity = 183/278 (65.83%), Postives = 230/278 (82.73%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           M  L  ++  DL+ TK+VF+SA+RFA+SIN PC PFGDEL+ SAQEQV+YM+  D D  L
Sbjct: 145 MPVLARIQPVDLTATKNVFMSAVRFAMSINGPCPPFGDELKTSAQEQVEYMLGEDEDLPL 204

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           V  DDEV+SV+R GLSR C  F+ +LSS LLES+L S   E K++  LSDLEW+C++LPK
Sbjct: 205 VTADDEVRSVVRTGLSRICKCFEQELSSFLLESNLASDTAEAKIMHCLSDLEWMCNILPK 264

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           M+LMKDFVSNW EIS NVL ++ED+KL+SLMWGLK KLIE+T K L+AVGYG+VILPAP 
Sbjct: 265 MDLMKDFVSNWAEISANVLGLVEDQKLDSLMWGLKTKLIEVTAKVLDAVGYGSVILPAPC 324

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           R++LL+ WLPYIRK+KPLLDSK   E  F YKMD++LC +IEGAIVS+VL+LPSNDQA I
Sbjct: 325 RVTLLKTWLPYIRKIKPLLDSKSNEENGFPYKMDEDLCQSIEGAIVSLVLSLPSNDQADI 384

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGID 279
             DWMKA+++QYPDL++AFE+WC+RTKSAKRRL+EG++
Sbjct: 385 FADWMKADQVQYPDLSEAFEVWCFRTKSAKRRLMEGLN 422

The following BLAST results are available for this feature:

BLAST of Carg21301-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929149.1	1.5e-159	98.97	BTB/POZ domain-containing protein At3g05675 [Cucurbita moschata]	[more]
XP_023520561.1	2.0e-159	98.97	BTB/POZ domain-containing protein At3g05675 [Cucurbita pepo subsp. pepo]	[more]
XP_022970078.1	5.3e-157	97.94	BTB/POZ domain-containing protein At3g05675 [Cucurbita maxima]	[more]
XP_011654681.1	3.4e-143	88.01	PREDICTED: BTB/POZ domain-containing protein At3g05675 [Cucumis sativus] >KGN499...	[more]
XP_008437433.1	1.7e-142	87.67	PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo]...	[more]

BLAST of Carg21301-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10800.1	5.5e-55	43.54	BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (T...	[more]
AT3G05675.2	3.0e-45	38.11	BTB/POZ domain-containing protein	[more]
AT1G63850.1	5.7e-04	24.31	BTB/POZ domain-containing protein	[more]

BLAST of Carg21301-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RX01\|Y3567_ARATH	5.4e-44	38.11	BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of Carg21301-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMC5\|A0A0A0KMC5_CUCSA	2.2e-143	88.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148650 PE=4 SV=1	[more]
tr\|A0A1S3ATN5\|A0A1S3ATN5_CUCME	1.1e-142	87.67	BTB/POZ domain-containing protein At3g05675 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A1S4DT33\|A0A1S4DT33_CUCME	1.9e-118	88.43	BTB/POZ domain-containing protein At3g05675 isoform X2 OS=Cucumis melo OX=3656 G...	[more]
tr\|F6HU59\|F6HU59_VITVI	2.4e-105	67.63	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g02270 PE=4 SV=...	[more]
tr\|A0A2P5DJV4\|A0A2P5DJV4_PARAD	9.4e-102	65.83	BTB/POZ domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR038920	BTB/POZ_dom_prot

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg21301	Carg21301	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21301-RA.CDS.1	Carg21301-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21301-RA.exon.1	Carg21301-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg21301-RA	Carg21301-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038920	BTB/POZ domain-containing protein	PANTHER	PTHR31060	FAMILY NOT NAMED	coord: 1..280
None	No IPR available	PANTHER	PTHR31060:SF8	F8M12.23 PROTEIN	coord: 1..280