Carg21301 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21301
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	BTB/POZ domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_128 : 256914 .. 257789 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACACTGCCCAGTGTCGAATTTGCAGATTTGAGTCCCACAAAAGATGTTTTTGTTTCAGCTCTCCGCTTTGCTCTGTCAATTAACAGCCCATGTGTGCCATTTGGAGATGAGCTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGGTAAGAGCAGACGCCGATACGTCGTTGGTAATAACTGACGACGAAGTAAAATCCGTGTTGAGAATGGGTCTTTCTAGAACTTGTGCATCGTTTCAGACAGATCTATCTTCACTACTTTTGGAGTCTGACCTTACATCTCAAGTCAACGAAGACAAGCTATTGAGAACACTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAATTTAATGAAAGACTTCGTTTCCAACTGGATCGAGATATCTGGGAACGTACTGAAGGTCATCGAGGACGAAAAGTTAAATTCCTTAATGTGGGGTTTGAAGGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACTGTGATTCTTCCTGCACCGTACCGGTTGTCACTGCTTCAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTCGATTCAAAGTGCGTCGCAGAGACAGATTTTCGTTACAAGATGGACGACGAGCTGTGCTTGAATATCGAGGGGGCAATTGTTTCCATGGTATTGACATTGCCTTCAAATGATCAAGCAGGTATCTTGGTAGACTGGATGAAAGCAGAGGAAATGCAGTATCCTGATTTAACTGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCCCTGACAATGATGATGCTGCAATCAGCTTTTGA

mRNA sequence

ATGTCGACACTGCCCAGTGTCGAATTTGCAGATTTGAGTCCCACAAAAGATGTTTTTGTTTCAGCTCTCCGCTTTGCTCTGTCAATTAACAGCCCATGTGTGCCATTTGGAGATGAGCTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGGTAAGAGCAGACGCCGATACGTCGTTGGTAATAACTGACGACGAAGTAAAATCCGTGTTGAGAATGGGTCTTTCTAGAACTTGTGCATCGTTTCAGACAGATCTATCTTCACTACTTTTGGAGTCTGACCTTACATCTCAAGTCAACGAAGACAAGCTATTGAGAACACTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAATTTAATGAAAGACTTCGTTTCCAACTGGATCGAGATATCTGGGAACGTACTGAAGGTCATCGAGGACGAAAAGTTAAATTCCTTAATGTGGGGTTTGAAGGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACTGTGATTCTTCCTGCACCGTACCGGTTGTCACTGCTTCAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTCGATTCAAAGTGCGTCGCAGAGACAGATTTTCGTTACAAGATGGACGACGAGCTGTGCTTGAATATCGAGGGGGCAATTGTTTCCATGGTATTGACATTGCCTTCAAATGATCAAGCAGGTATCTTGGTAGACTGGATGAAAGCAGAGGAAATGCAGTATCCTGATTTAACTGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCCCTGACAATGATGATGCTGCAATCAGCTTTTGA

Coding sequence (CDS)

ATGTCGACACTGCCCAGTGTCGAATTTGCAGATTTGAGTCCCACAAAAGATGTTTTTGTTTCAGCTCTCCGCTTTGCTCTGTCAATTAACAGCCCATGTGTGCCATTTGGAGATGAGCTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGGTAAGAGCAGACGCCGATACGTCGTTGGTAATAACTGACGACGAAGTAAAATCCGTGTTGAGAATGGGTCTTTCTAGAACTTGTGCATCGTTTCAGACAGATCTATCTTCACTACTTTTGGAGTCTGACCTTACATCTCAAGTCAACGAAGACAAGCTATTGAGAACACTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAATTTAATGAAAGACTTCGTTTCCAACTGGATCGAGATATCTGGGAACGTACTGAAGGTCATCGAGGACGAAAAGTTAAATTCCTTAATGTGGGGTTTGAAGGTTAAGCTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACTGTGATTCTTCCTGCACCGTACCGGTTGTCACTGCTTCAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTGCTCGATTCAAAGTGCGTCGCAGAGACAGATTTTCGTTACAAGATGGACGACGAGCTGTGCTTGAATATCGAGGGGGCAATTGTTTCCATGGTATTGACATTGCCTTCAAATGATCAAGCAGGTATCTTGGTAGACTGGATGAAAGCAGAGGAAATGCAGTATCCTGATTTAACTGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGGTTGAAGGTATTGATGGAGCTTGCCCTGACAATGATGATGCTGCAATCAGCTTTTGA

Protein sequence

MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSLVITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPKMNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYRLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGILVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDNDDAAISF

Homology

[Close]

BLAST of Carg21301 vs. NCBI nr
Match: XP_022929149.1 (BTB/POZ domain-containing protein At3g05675 [Cucurbita moschata])

HSP 1 Score: 571.6 bits (1472), Expect = 1.5e-159
Identity = 288/291 (98.97%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYM+RADADTSL
Sbjct: 9   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMIRADADTSL 68

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK
Sbjct: 69  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 128

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY
Sbjct: 129 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 188

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLLQFWLPYIRKMKPLLDSKCVAETDF YKMDDELCLNIEGAIVSMVLTLPSNDQAGI
Sbjct: 189 RLSLLQFWLPYIRKMKPLLDSKCVAETDFSYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 248

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDNDDAAISF 292
           LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGAC DNDDAAISF
Sbjct: 249 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACSDNDDAAISF 299

[Close]

BLAST of Carg21301 vs. NCBI nr
Match: XP_023520561.1 (BTB/POZ domain-containing protein At3g05675 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 571.2 bits (1471), Expect = 2.0e-159
Identity = 288/291 (98.97%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MSTLPSV+FADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL
Sbjct: 5   MSTLPSVKFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 64

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VITDDEVKSVLRMGLSRTCASFQTDLSSLL ESDLTSQVNEDKLLRTLSDLEWICSLLPK
Sbjct: 65  VITDDEVKSVLRMGLSRTCASFQTDLSSLLFESDLTSQVNEDKLLRTLSDLEWICSLLPK 124

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY
Sbjct: 125 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 184

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI
Sbjct: 185 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 244

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDNDDAAISF 292
           LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGAC DNDDAAISF
Sbjct: 245 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACSDNDDAAISF 295

[Close]

BLAST of Carg21301 vs. NCBI nr
Match: XP_022970078.1 (BTB/POZ domain-containing protein At3g05675 [Cucurbita maxima])

HSP 1 Score: 563.1 bits (1450), Expect = 5.3e-157
Identity = 285/291 (97.94%), Postives = 286/291 (98.28%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MSTLPSV+FADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADA TSL
Sbjct: 1   MSTLPSVKFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADAGTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESD TSQV EDKLLRTLSDLEWICSLLPK
Sbjct: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDFTSQVIEDKLLRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYG VILPAPY
Sbjct: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGAVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI
Sbjct: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDNDDAAISF 292
           LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGAC DNDDAAISF
Sbjct: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACSDNDDAAISF 291

[Close]

BLAST of Carg21301 vs. NCBI nr
Match: XP_011654681.1 (PREDICTED: BTB/POZ domain-containing protein At3g05675 [Cucumis sativus] >KGN49994.1 hypothetical protein Csa_5G148650 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 3.4e-143
Identity = 257/292 (88.01%), Postives = 271/292 (92.81%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MS LPS +FADLSPTKDVFVSAL FALSINSPC PFGDELQRSAQEQVDYM+RADADTSL
Sbjct: 1   MSILPSAKFADLSPTKDVFVSALGFALSINSPCAPFGDELQRSAQEQVDYMLRADADTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VI DDEVKSVL+ GL RTC SF+ +LSSLLLE DL SQ  EDK+LRTLSDLEWICSLLPK
Sbjct: 61  VIKDDEVKSVLKTGLFRTCRSFERELSSLLLEPDLASQAKEDKILRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFV NWIEISGN+LKVIEDEKLNSLMWGLK+KLIEMTNKALEAVGYGTVILPAPY
Sbjct: 121 MNLMKDFVYNWIEISGNILKVIEDEKLNSLMWGLKLKLIEMTNKALEAVGYGTVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL LPSNDQAGI
Sbjct: 181 RLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAISF 292
           L DWMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  ISF
Sbjct: 241 LADWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF 292

[Close]

BLAST of Carg21301 vs. NCBI nr
Match: XP_008437433.1 (PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo] >XP_008437434.1 PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo])

HSP 1 Score: 515.0 bits (1325), Expect = 1.7e-142
Identity = 256/292 (87.67%), Postives = 274/292 (93.84%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MS LPSV+FADLSPTK+VFVSAL FALSINSP  PFGDEL+RSAQEQV+YM+RADADTSL
Sbjct: 1   MSILPSVKFADLSPTKNVFVSALGFALSINSPSAPFGDELRRSAQEQVEYMLRADADTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VI DDEVKSVL+ GL RTC+SF+ +LSSLLLE DL SQ NEDK+LRTLSDLEWICSLLPK
Sbjct: 61  VIKDDEVKSVLKTGLFRTCSSFERELSSLLLEPDLASQANEDKILRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGN+LKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY
Sbjct: 121 MNLMKDFVSNWIEISGNILKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL LPSNDQAGI
Sbjct: 181 RLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAISF 292
           L +WMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  ISF
Sbjct: 241 LAEWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF 292

[Close]

BLAST of Carg21301 vs. TAIR10
Match: AT4G10800.1 (BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT3G05675.1))

HSP 1 Score: 211.8 bits (538), Expect = 5.5e-55
Identity = 118/271 (43.54%), Postives = 171/271 (63.10%), Query Frame = 0


Query: 15  TKDVFVSALRFALSI----NSPCVPFGDELQRSAQEQVDYMVRADADTSLVITDDEVKSV 74
           TK+VF+SAL FA+SI    NSP                                   KSV
Sbjct: 12  TKNVFLSALHFAMSIDTLKNSP--ELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSV 71

Query: 75  LRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPKMNLMKDFVSN 134
           +R+G+S   +     LSSLL+   +  +  E  +L+TL D+EW+C +LP+M LMKD V  
Sbjct: 72  VRLGISNVISMLLDRLSSLLV---ILPECTEFSVLKTLYDIEWLCKVLPRMELMKDLVVK 131

Query: 135 WIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYRLSLLQFWLP 194
           W + S  +L + +  +L+S + G+KVKL+E+T K LEAVGYG VI+P+  R  LL+ WLP
Sbjct: 132 WTDASSEILVIAQKCELDSRILGVKVKLVEVTGKILEAVGYGIVIVPSKSRTCLLKIWLP 191

Query: 195 YIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGILVDWMKA--- 254
           +IR++K L+D++     ++ Y+MD++LC  IEG++VS+VLTLPSNDQA +  +WM+    
Sbjct: 192 FIRRLKTLVDAE---GCEYEYRMDEDLCEFIEGSMVSLVLTLPSNDQAEVFGEWMRGIGL 251

Query: 255 EEMQYPDLTDAFELWCYRTKSAKRRLVEGID 279
           E +++PDL++AFE+WCYR+KSAKRRLVE  D
Sbjct: 252 EGVKFPDLSEAFEVWCYRSKSAKRRLVERCD 274

[Close]

BLAST of Carg21301 vs. TAIR10
Match: AT3G05675.2 (BTB/POZ domain-containing protein)

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-45
Identity = 109/286 (38.11%), Postives = 162/286 (56.64%), Query Frame = 0


Query: 4   LPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSLVIT 63
           L  ++  D S   ++FVSA RFA S  SP +  GD ++ SAQEQ++YM+  D D  L+I 
Sbjct: 159 LARLQPVDQSAVLEIFVSAFRFATS--SPPLLLGD-IKSSAQEQIEYMITEDDDAPLLIA 218

Query: 64  DDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLR-TLSDLEWICSLLPKMN 123
           D+EVK  ++  +      F   L  + L+   +  +N+    R  LSD+ W+  +L KM 
Sbjct: 219 DEEVKLEVKQCVKSLFVRFFQCLEEITLKPVESEVINKKGSFRMVLSDMCWVFQILTKME 278

Query: 124 LMKDFVSNWIEISGNVLKVIED-EKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYR 183
           +++DFV  W +IS  ++KV+E                          +GYGTVILP   R
Sbjct: 279 VVRDFVITWADISEKLVKVVEQXXXXXXXXXXXXXXXXXXXXXXXXXIGYGTVILPTAKR 338

Query: 184 LSLLQFWLPYIRKMKPLLDSKCVAETD---FRYKMDDELCLNIEGAIVSMVLTLPSNDQA 243
           L +++ WLP++R  KPL+DS    + +    RYK+D E+   +E + VS++L LPS DQA
Sbjct: 339 LQMVKLWLPFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESSFVSIILALPSADQA 398

Query: 244 GILVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN 285
            IL +W+    + YPDLT+AFE+WCYR+K AKRRL  G+ G   +N
Sbjct: 399 EILTEWLSKNGL-YPDLTEAFEVWCYRSKVAKRRL--GLVGGEEEN 438

[Close]

BLAST of Carg21301 vs. TAIR10
Match: AT1G63850.1 (BTB/POZ domain-containing protein)

HSP 1 Score: 42.4 bits (98), Expect = 5.7e-04
Identity = 44/181 (24.31%), Postives = 75/181 (41.44%), Query Frame = 0


Query: 92  ESDLTSQVNEDKLLRTLSDLEWICSLLPKMNLMKDFVSNWIEISGNVLKVIEDEKLNSLM 151
           ESDL    N D++ R   +L WI  +L    + +DF+  W  +S       E  +++S +
Sbjct: 366 ESDLE---NVDQIARQADNLHWILDILIDRQIAEDFIVMWASLS-------ELSEVHSKV 425

Query: 152 WGL-KVKLIEMTNKALEAVGYGTVILPAPYRLSLLQFWLPYIRKMKPLLDSKCVAETDFR 211
             + + ++  +T +    +G G ++ P   R  LL+ WL       P  D       DF 
Sbjct: 426 PVVHRFEISRVTARIFVGIGKGQILTPKEVRCLLLRNWL------TPFYD-------DFG 485

Query: 212 YKMDDELCLN---IEGAIVSMVLTLPSNDQAGILVDWMKA---EEMQYPDLTDAFELWCY 266
           +       L+   IE  + + +LTLP   Q    + W           P++   FE+W  
Sbjct: 486 WMRRASKGLDRYLIEDGLSNTILTLPLAWQQEFFLAWFDRFLNSNEDCPNIQRGFEVWWR 523

[Close]

BLAST of Carg21301 vs. Swiss-Prot
Match: sp|Q8RX01|Y3567_ARATH (BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=At3g05675 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 5.4e-44
Identity = 109/286 (38.11%), Postives = 162/286 (56.64%), Query Frame = 0


Query: 4   LPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSLVIT 63
           L  ++  D S   ++FVSA RFA S  SP +  GD ++ SAQEQ++YM+  D D  L+I 
Sbjct: 159 LARLQPVDQSAVLEIFVSAFRFATS--SPPLLLGD-IKSSAQEQIEYMITEDDDAPLLIA 218

Query: 64  DDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLR-TLSDLEWICSLLPKMN 123
           D+EVK  ++  +      F   L  + L+   +  +N+    R  LSD+ W+  +L KM 
Sbjct: 219 DEEVKLEVKQCVKSLFVRFFQCLEEITLKPVESEVINKKGSFRMVLSDMCWVFQILTKME 278

Query: 124 LMKDFVSNWIEISGNVLKVIED-EKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPYR 183
           +++DFV  W +IS  ++KV+E                          +GYGTVILP   R
Sbjct: 279 VVRDFVITWADISEKLVKVVEQXXXXXXXXXXXXXXXXXXXXXXXXXIGYGTVILPTAKR 338

Query: 184 LSLLQFWLPYIRKMKPLLDSKCVAETD---FRYKMDDELCLNIEGAIVSMVLTLPSNDQA 243
           L +++ WLP++R  KPL+DS    + +    RYK+D E+   +E + VS++L LPS DQA
Sbjct: 339 LQMVKLWLPFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESSFVSIILALPSADQA 398

Query: 244 GILVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN 285
            IL +W+    + YPDLT+AFE+WCYR+K AKRRL  G+ G   +N
Sbjct: 399 EILTEWLSKNGL-YPDLTEAFEVWCYRSKVAKRRL--GLVGGEEEN 438

[Close]

BLAST of Carg21301 vs. TrEMBL
Match: tr|A0A0A0KMC5|A0A0A0KMC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148650 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.2e-143
Identity = 257/292 (88.01%), Postives = 271/292 (92.81%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MS LPS +FADLSPTKDVFVSAL FALSINSPC PFGDELQRSAQEQVDYM+RADADTSL
Sbjct: 1   MSILPSAKFADLSPTKDVFVSALGFALSINSPCAPFGDELQRSAQEQVDYMLRADADTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VI DDEVKSVL+ GL RTC SF+ +LSSLLLE DL SQ  EDK+LRTLSDLEWICSLLPK
Sbjct: 61  VIKDDEVKSVLKTGLFRTCRSFERELSSLLLEPDLASQAKEDKILRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFV NWIEISGN+LKVIEDEKLNSLMWGLK+KLIEMTNKALEAVGYGTVILPAPY
Sbjct: 121 MNLMKDFVYNWIEISGNILKVIEDEKLNSLMWGLKLKLIEMTNKALEAVGYGTVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL LPSNDQAGI
Sbjct: 181 RLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAISF 292
           L DWMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  ISF
Sbjct: 241 LADWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF 292

[Close]

BLAST of Carg21301 vs. TrEMBL
Match: tr|A0A1S3ATN5|A0A1S3ATN5_CUCME (BTB/POZ domain-containing protein At3g05675 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482849 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.1e-142
Identity = 256/292 (87.67%), Postives = 274/292 (93.84%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           MS LPSV+FADLSPTK+VFVSAL FALSINSP  PFGDEL+RSAQEQV+YM+RADADTSL
Sbjct: 1   MSILPSVKFADLSPTKNVFVSALGFALSINSPSAPFGDELRRSAQEQVEYMLRADADTSL 60

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           VI DDEVKSVL+ GL RTC+SF+ +LSSLLLE DL SQ NEDK+LRTLSDLEWICSLLPK
Sbjct: 61  VIKDDEVKSVLKTGLFRTCSSFERELSSLLLEPDLASQANEDKILRTLSDLEWICSLLPK 120

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           MNLMKDFVSNWIEISGN+LKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY
Sbjct: 121 MNLMKDFVSNWIEISGNILKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           RLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL LPSNDQAGI
Sbjct: 181 RLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGI 240

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAISF 292
           L +WMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  ISF
Sbjct: 241 LAEWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF 292

[Close]

BLAST of Carg21301 vs. TrEMBL
Match: tr|A0A1S4DT33|A0A1S4DT33_CUCME (BTB/POZ domain-containing protein At3g05675 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482849 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.9e-118
Identity = 214/242 (88.43%), Postives = 228/242 (94.21%), Query Frame = 0


Query: 51  MVRADADTSLVITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSD 110
           M+RADADTSLVI DDEVKSVL+ GL RTC+SF+ +LSSLLLE DL SQ NEDK+LRTLSD
Sbjct: 1   MLRADADTSLVIKDDEVKSVLKTGLFRTCSSFERELSSLLLEPDLASQANEDKILRTLSD 60

Query: 111 LEWICSLLPKMNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVG 170
           LEWICSLLPKMNLMKDFVSNWIEISGN+LKVIEDEKLNSLMWGLKVKLIEMTNKALEAVG
Sbjct: 61  LEWICSLLPKMNLMKDFVSNWIEISGNILKVIEDEKLNSLMWGLKVKLIEMTNKALEAVG 120

Query: 171 YGTVILPAPYRLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVL 230
           YGTVILPAPYRLSLL+FWLPYIRKMKPLLDSKC+AETDFRYKMD+ELC+NIEGAIVSMVL
Sbjct: 121 YGTVILPAPYRLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVL 180

Query: 231 TLPSNDQAGILVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGIDGACPDN-DDAAI 290
            LPSNDQAGIL +WMKAEE+QYPDLTDAFELWCYRTKSAKRRL+EG DGAC DN DD  I
Sbjct: 181 ALPSNDQAGILAEWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTI 240

Query: 291 SF 292
           SF
Sbjct: 241 SF 242

[Close]

BLAST of Carg21301 vs. TrEMBL
Match: tr|F6HU59|F6HU59_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g02270 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.4e-105
Identity = 188/278 (67.63%), Postives = 236/278 (84.89%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           M  +  ++  DLS T++VFVSA+RFA SI +PC+PFGDEL+ SAQEQV+YM+  D DTSL
Sbjct: 145 MPIVARLQPVDLSTTRNVFVSAIRFATSIAAPCLPFGDELKTSAQEQVEYMLGEDEDTSL 204

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           +  DDEVK V++MGLS+ C+SF+ +LSSLLLESDLTS+  ED++LR+LSDLEW+C++LPK
Sbjct: 205 ITADDEVKLVVKMGLSQICSSFEKELSSLLLESDLTSEAVEDRVLRSLSDLEWMCNILPK 264

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           M+LMK+FVSNW EISG +L V+ED KL+SLMWGLKVKLIE+T K LEAVGYG VILP P 
Sbjct: 265 MDLMKEFVSNWTEISGRILTVVEDRKLDSLMWGLKVKLIEVTGKVLEAVGYGNVILPPPC 324

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           R+ LL+ WLPYIRKMKPLLDSK   +  F +KMD++LC +IEGAI+S++L LPSNDQA I
Sbjct: 325 RVQLLKTWLPYIRKMKPLLDSKGHEDLGFPHKMDEDLCESIEGAIISLILALPSNDQADI 384

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGID 279
           L DWMK E+++YPDL++AFE+WCYRTKSAKRRLVEG+D
Sbjct: 385 LADWMKTEQVRYPDLSEAFEVWCYRTKSAKRRLVEGLD 422

[Close]

BLAST of Carg21301 vs. TrEMBL
Match: tr|A0A2P5DJV4|A0A2P5DJV4_PARAD (BTB/POZ domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_057640 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 9.4e-102
Identity = 183/278 (65.83%), Postives = 230/278 (82.73%), Query Frame = 0


Query: 1   MSTLPSVEFADLSPTKDVFVSALRFALSINSPCVPFGDELQRSAQEQVDYMVRADADTSL 60
           M  L  ++  DL+ TK+VF+SA+RFA+SIN PC PFGDEL+ SAQEQV+YM+  D D  L
Sbjct: 145 MPVLARIQPVDLTATKNVFMSAVRFAMSINGPCPPFGDELKTSAQEQVEYMLGEDEDLPL 204

Query: 61  VITDDEVKSVLRMGLSRTCASFQTDLSSLLLESDLTSQVNEDKLLRTLSDLEWICSLLPK 120
           V  DDEV+SV+R GLSR C  F+ +LSS LLES+L S   E K++  LSDLEW+C++LPK
Sbjct: 205 VTADDEVRSVVRTGLSRICKCFEQELSSFLLESNLASDTAEAKIMHCLSDLEWMCNILPK 264

Query: 121 MNLMKDFVSNWIEISGNVLKVIEDEKLNSLMWGLKVKLIEMTNKALEAVGYGTVILPAPY 180
           M+LMKDFVSNW EIS NVL ++ED+KL+SLMWGLK KLIE+T K L+AVGYG+VILPAP 
Sbjct: 265 MDLMKDFVSNWAEISANVLGLVEDQKLDSLMWGLKTKLIEVTAKVLDAVGYGSVILPAPC 324

Query: 181 RLSLLQFWLPYIRKMKPLLDSKCVAETDFRYKMDDELCLNIEGAIVSMVLTLPSNDQAGI 240
           R++LL+ WLPYIRK+KPLLDSK   E  F YKMD++LC +IEGAIVS+VL+LPSNDQA I
Sbjct: 325 RVTLLKTWLPYIRKIKPLLDSKSNEENGFPYKMDEDLCQSIEGAIVSLVLSLPSNDQADI 384

Query: 241 LVDWMKAEEMQYPDLTDAFELWCYRTKSAKRRLVEGID 279
             DWMKA+++QYPDL++AFE+WC+RTKSAKRRL+EG++
Sbjct: 385 FADWMKADQVQYPDLSEAFEVWCFRTKSAKRRLMEGLN 422

The following BLAST results are available for this feature:

BLAST of Carg21301 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929149.1	1.5e-159	98.97	BTB/POZ domain-containing protein At3g05675 [Cucurbita moschata]	[more]
XP_023520561.1	2.0e-159	98.97	BTB/POZ domain-containing protein At3g05675 [Cucurbita pepo subsp. pepo]	[more]
XP_022970078.1	5.3e-157	97.94	BTB/POZ domain-containing protein At3g05675 [Cucurbita maxima]	[more]
XP_011654681.1	3.4e-143	88.01	PREDICTED: BTB/POZ domain-containing protein At3g05675 [Cucumis sativus] >KGN499...	[more]
XP_008437433.1	1.7e-142	87.67	PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo]...	[more]

BLAST of Carg21301 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10800.1	5.5e-55	43.54	BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (T...	[more]
AT3G05675.2	3.0e-45	38.11	BTB/POZ domain-containing protein	[more]
AT1G63850.1	5.7e-04	24.31	BTB/POZ domain-containing protein	[more]

BLAST of Carg21301 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RX01\|Y3567_ARATH	5.4e-44	38.11	BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of Carg21301 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMC5\|A0A0A0KMC5_CUCSA	2.2e-143	88.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148650 PE=4 SV=1	[more]
tr\|A0A1S3ATN5\|A0A1S3ATN5_CUCME	1.1e-142	87.67	BTB/POZ domain-containing protein At3g05675 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A1S4DT33\|A0A1S4DT33_CUCME	1.9e-118	88.43	BTB/POZ domain-containing protein At3g05675 isoform X2 OS=Cucumis melo OX=3656 G...	[more]
tr\|F6HU59\|F6HU59_VITVI	2.4e-105	67.63	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g02270 PE=4 SV=...	[more]
tr\|A0A2P5DJV4\|A0A2P5DJV4_PARAD	9.4e-102	65.83	BTB/POZ domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR038920	BTB/POZ_dom_prot

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21301-RA	Carg21301-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038920	BTB/POZ domain-containing protein	PANTHER	PTHR31060	FAMILY NOT NAMED	coord: 1..280
None	No IPR available	PANTHER	PTHR31060:SF8	F8M12.23 PROTEIN	coord: 1..280

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21301	Cla011342	Watermelon (97103) v1	carwmB0352
Carg21301	Csa5G148650	Cucumber (Chinese Long) v2	carcuB0390
Carg21301	MELO3C005775	Melon (DHL92) v3.5.1	carmeB0364
Carg21301	ClCG01G001620	Watermelon (Charleston Gray)	carwcgB0352
Carg21301	CSPI05G04400	Wild cucumber (PI 183967)	carcpiB0395
Carg21301	Cucsa.304140	Cucumber (Gy14) v1	carcgyB0420
Carg21301	CmaCh15G013070	Cucurbita maxima (Rimu)	carcmaB0505
Carg21301	CmoCh15G013740	Cucurbita moschata (Rifu)	carcmoB0488
Carg21301	Lsi09G001500	Bottle gourd (USVL1VR-Ls)	carlsiB327
Carg21301	Cp4.1LG00g00630	Cucurbita pepo (Zucchini)	carcpeB0501
Carg21301	CsGy5G001650	Cucumber (Gy14) v2	carcgybB0370
Carg21301	MELO3C005775.2	Melon (DHL92) v3.6.1	carmedB0369
Carg21301	CsaV3_5G001780	Cucumber (Chinese Long) v3	carcucB0394
Carg21301	Cla97C01G001630	Watermelon (97103) v2	carwmbB0376
Carg21301	Bhi12G000096	Wax gourd	carwgoB0441

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21301	Silver-seed gourd	carcarB385
Carg21301	Cucurbita maxima (Rimu)	carcmaB0507
Carg21301	Cucurbita moschata (Rifu)	carcmoB0490
Carg21301	Cucurbita pepo (Zucchini)	carcpeB0505