Carg19492-RA (mRNA) Silver-seed gourd

Overview
NameCarg19492-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionacyl-CoA-binding protein
LocationCucurbita_argyrosperma_scaffold_204 : 472314 .. 473733 (-)
Sequence length611
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATATATATATATAAATTTCTTTTGAAGGCGATTACTCGGCGATTTATTCCTTCTGTTCCACTCACCTCCATGTATTTAAAAGCTCCACACTCGTCGTCCTCCCCAGTTAGTATTTCGTTTCTGTATTGAGCTTCGAGTCGCCATGGGTTTGAAGGTAGGTTTCTCTCTCATTCTTCTTCTGAATTCTCAGTTTCTTTACGTTATTAGCTTCGAAGCTCTCAATCCTTCTCTTTATGCCATTTTCTTGTTCGACCAGTAGTTGAATTCTTCGTTTAGAATGGGTGATTTGATGCCGAATGATTATGCTTTAGCTTTTCATTGGTGATGATCTTGGCATTGAGTTAGGGTATTAGTGCAGATCGCTGCATGTCTCTTGTTTTGCGTCGTAGTTATGCATTCATAATATGTTAGATTTGTTGGACTTCGTTAGAATGATTTCTGTTGGATCTGTCTTTTCAGATCTGTGTTTTTTAGAGTCGATCTGTGTTTTCCTTTCGAAGAATGAACGACATCTGGTCGTTCCGGATCGAGAGATGTTAATCTTTTGGTTGTTTCCAAATTGATTGCTTGACTCTAGATATTTAGGGCAATAGGTGCAGAGAATTGTAAGAACTTCATATATTTGTTCTGTTATATTGAACTAAAAGCACGCAGTCTGTATCACAACTTGATGAGGCTGAGTTCTGCAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGTAAGTACTGTCTTTCATTGAATATAATTTCTAAAGAAAATTTGTGTATAGATGGAATTATGTGATCAAATTCTCCAATGTAACCGTTTATTGCAACTATGATTGATTTGTAGGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGGTATGTTTTCTCAGAATTCAACACTATGAAATGGATTTTCTCTATTTTGCGATGACATTGAAATATGTTTACTCTTTTTTGCCATGAACTCTATTAGATTAAAGATTTGTAAAAAATGTACAACAACGAGCTTGATTGAAGAGAATTAAATGTTTTTGCAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGATAAGTTTCTCGATTATCTGTATGAACAATGATGTTGAAATAATCCTTGTTTAAGTTCAGTACTTTTATCATATTTATCTACATTGTGTAACAATGAACTACACAATGAACTATGTGCAAGTATTATTACTATTGGATTTCGCTAATGAATCTTCAACCTTTTAACCAAATTAATATACTTGGGCTTGTTAATTGCTTT

mRNA sequence

TATATATATATATAAATTTCTTTTGAAGGCGATTACTCGGCGATTTATTCCTTCTGTTCCACTCACCTCCATGTATTTAAAAGCTCCACACTCGTCGTCCTCCCCAGTTAGTATTTCGTTTCTGTATTGAGCTTCGAGTCGCCATGGGTTTGAAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGATAAGTTTCTCGATTATCTGTATGAACAATGATGTTGAAATAATCCTTGTTTAAGTTCAGTACTTTTATCATATTTATCTACATTGTGTAACAATGAACTACACAATGAACTATGTGCAAGTATTATTACTATTGGATTTCGCTAATGAATCTTCAACCTTTTAACCAAATTAATATACTTGGGCTTGTTAATTGCTTT

Coding sequence (CDS)

ATGGGTTTGAAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGA

Protein sequence

MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAN
Homology
[Close]
BLAST of Carg19492-RA vs. NCBI nr
Match: XP_022923252.1 (acyl-CoA-binding protein [Cucurbita moschata] >XP_022965372.1 acyl-CoA-binding protein [Cucurbita maxima] >XP_023551848.1 acyl-CoA-binding protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 8.6e-42
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVEAKSKDDAMSDYITKVKQLQEAAAAN
Sbjct: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 89

[Close]
BLAST of Carg19492-RA vs. NCBI nr
Match: XP_022145449.1 (acyl-CoA-binding protein [Momordica charantia])

HSP 1 Score: 172.2 bits (435), Expect = 8.1e-40
Identity = 84/89 (94.38%), Postives = 89/89 (100.00%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPG+FNQRDRAKWDAW
Sbjct: 1  MGLKEDFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGLFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVEAKSKDDAM+DYITKVKQLQEAAA++
Sbjct: 61 KAVEAKSKDDAMNDYITKVKQLQEAAASS 89

[Close]
BLAST of Carg19492-RA vs. NCBI nr
Match: XP_022937196.1 (acyl-CoA-binding domain-containing protein 1 [Cucurbita moschata] >XP_023540555.1 acyl-CoA-binding domain-containing protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNTSRPGVF QRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVEAKSKDDAMSDYITKVKQLQE+AAAN
Sbjct: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 89

[Close]
BLAST of Carg19492-RA vs. NCBI nr
Match: XP_023005811.1 (acyl-CoA-binding domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTL ENTSNENKLILYGLYKQATVG VNTSRPGVFNQRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLSENTSNENKLILYGLYKQATVGAVNTSRPGVFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVEAKSKDDAMSDYITKVKQLQE+AAAN
Sbjct: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 89

[Close]
BLAST of Carg19492-RA vs. NCBI nr
Match: XP_008448583.1 (PREDICTED: acyl-CoA-binding protein [Cucumis melo])

HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38
Identity = 81/89 (91.01%), Postives = 88/89 (98.88%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTSNENKLILYGLYKQATVGPV TSRPG+FNQ++RAKWDAW
Sbjct: 1  MGLKEDFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVTTSRPGMFNQKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVEAKSK+DAM+DYITKVKQLQEAAAA+
Sbjct: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 89

[Close]
BLAST of Carg19492-RA vs. TAIR10
Match: AT1G31812.1 (acyl-CoA-binding protein 6)

HSP 1 Score: 130.6 bits (327), Expect = 4.9e-31
Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEE+AEK  TL E  SNE+ LILYGLYKQA  GPV+TSRPG+F+ ++RAKWDAW
Sbjct: 1  MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KS ++AM+DYITKVKQL E AA+
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQLLEVAAS 88

[Close]
BLAST of Carg19492-RA vs. TAIR10
Match: AT5G53470.1 (acyl-CoA binding protein 1)

HSP 1 Score: 60.1 bits (144), Expect = 8.1e-10
Identity = 32/75 (42.67%), Postives = 40/75 (53.33%), Query Frame = 0 

Query: 11  AEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDD 70
           A  +  L +  SNE +L LYGLYK AT GP    +P       RAKW AW+ + A   ++
Sbjct: 107 AAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEE 166

Query: 71  AMSDYITKVKQLQEA 86
           AM  YI  V QL  A
Sbjct: 167 AMEKYIDLVTQLYPA 181

[Close]
BLAST of Carg19492-RA vs. TAIR10
Match: AT4G27780.1 (acyl-CoA binding protein 2)

HSP 1 Score: 52.8 bits (125), Expect = 1.3e-07
Identity = 27/69 (39.13%), Postives = 36/69 (52.17%), Query Frame = 0 

Query: 14  AKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMS 73
           A  L +   ++ +  LYGLYK AT GP    +P       RAKW AW+ + A   ++AM 
Sbjct: 120 ADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAME 179

Query: 74  DYITKVKQL 83
            YI  V QL
Sbjct: 180 KYIEIVTQL 188

[Close]
BLAST of Carg19492-RA vs. TAIR10
Match: AT3G05420.2 (acyl-CoA binding protein 4)

HSP 1 Score: 50.4 bits (119), Expect = 6.4e-07
Identity = 21/63 (33.33%), Postives = 37/63 (58.73%), Query Frame = 0 

Query: 14 AKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMS 73
          AK +     ++  L+LY LY+QATVGP NT +P  +   +++KW +W+ +      +AM 
Sbjct: 32 AKNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMR 91

Query: 74 DYI 77
           ++
Sbjct: 92 LFV 94

[Close]
BLAST of Carg19492-RA vs. TAIR10
Match: AT5G27630.1 (acyl-CoA binding protein 5)

HSP 1 Score: 49.3 bits (116), Expect = 1.4e-06
Identity = 25/71 (35.21%), Postives = 42/71 (59.15%), Query Frame = 0 

Query: 15  KTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSD 74
           K L    SN+  L+LY L++QAT+GP +  +P  +N  +++KW +W+ +      +AM  
Sbjct: 34  KQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQGLGTMPSIEAMRL 93

Query: 75  YITKVKQLQEA 86
           +   VK L+EA
Sbjct: 94  F---VKILEEA 101

[Close]
BLAST of Carg19492-RA vs. Swiss-Prot
Match: sp|Q75G87|ACBP3_ORYSJ (Acyl-CoA-binding domain-containing protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP3 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.3e-37
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGL+E+FEEYAEK KTLPE+TSNE+KLILYGLYKQATVG VNTSRPG+F QRDRAKWDAW
Sbjct: 1  MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTSRPGIFAQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSK++AMSDYITKVKQLQE AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLQEEAAA 88

[Close]
BLAST of Carg19492-RA vs. Swiss-Prot
Match: sp|O04066|ACBP_RICCO (Acyl-CoA-binding protein OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.3e-37
Identity = 76/89 (85.39%), Postives = 83/89 (93.26%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKE+FEE+AEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FN RDRAKWDAW
Sbjct: 1  MGLKEDFEEHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGMFNMRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVE KS ++AMSDYITKVKQL   AAA+
Sbjct: 61 KAVEGKSTEEAMSDYITKVKQLLGEAAAS 89

[Close]
BLAST of Carg19492-RA vs. Swiss-Prot
Match: sp|Q84SC3|ACBP1_ORYSJ (Acyl-CoA-binding domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP1 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 9.7e-37
Identity = 75/88 (85.23%), Postives = 83/88 (94.32%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGL+E+FE+YAEKAKTLPE+TSNENKLILYGLYKQATVG VNT+RPG+F QRDRAKWDAW
Sbjct: 1  MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSK++AMSDYITKVKQL E AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAAA 88

[Close]
BLAST of Carg19492-RA vs. Swiss-Prot
Match: sp|Q5VRM0|ACBP2_ORYSJ (Acyl-CoA-binding domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP2 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-33
Identity = 68/89 (76.40%), Postives = 80/89 (89.89%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGL+EEFEE+AEKAKTLP+  SNE+KL+LYGLYKQATVGPV T RPG+FN +DR KWDAW
Sbjct: 1  MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVTTGRPGIFNLKDRYKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVE KSK++AM+DYITKVKQL E A+A+
Sbjct: 61 KAVEGKSKEEAMADYITKVKQLLEEASAS 89

[Close]
BLAST of Carg19492-RA vs. Swiss-Prot
Match: sp|O22643|ACBP_FRIAG (Acyl-CoA-binding protein OS=Fritillaria agrestis OX=64177 GN=ACABP PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-33
Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          M LKEEFEE+A KAKTLPE+TSNENKLILYGLYKQ+TVGPV+T RPG+F+ R+RAKWDAW
Sbjct: 1  MALKEEFEEHAVKAKTLPESTSNENKLILYGLYKQSTVGPVDTGRPGMFSPRERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAA 88
          KAVE KSK++AM DYITKVKQL E +A
Sbjct: 61 KAVEGKSKEEAMGDYITKVKQLLEESA 87

[Close]
BLAST of Carg19492-RA vs. TrEMBL
Match: tr|A0A1S3BKW8|A0A1S3BKW8_CUCME (acyl-CoA-binding protein OS=Cucumis melo OX=3656 GN=LOC103490717 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-38
Identity = 81/89 (91.01%), Postives = 88/89 (98.88%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTSNENKLILYGLYKQATVGPV TSRPG+FNQ++RAKWDAW
Sbjct: 1  MGLKEDFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVTTSRPGMFNQKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVEAKSK+DAM+DYITKVKQLQEAAAA+
Sbjct: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 89

[Close]
BLAST of Carg19492-RA vs. TrEMBL
Match: tr|A0A2P4GPK5|A0A2P4GPK5_QUESU (Acyl-coa-binding protein OS=Quercus suber OX=58331 GN=CFP56_33020 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-38
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEE+AEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FN RDRAKWDAW
Sbjct: 1  MGLKEEFEEHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNMRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVE KSKD+AMSDYITKVKQLQE AAA+
Sbjct: 61 KAVEGKSKDEAMSDYITKVKQLQEEAAAS 89

[Close]
BLAST of Carg19492-RA vs. TrEMBL
Match: tr|A0A2C9UIZ2|A0A2C9UIZ2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G182400 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-38
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FN RDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNMRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSK++AMSDYITKVKQLQE AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLQEEAAA 88

[Close]
BLAST of Carg19492-RA vs. TrEMBL
Match: tr|K9ZUG4|K9ZUG4_VERFO (Acyl-CoA binding protein 6 OS=Vernicia fordii OX=73154 GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.0e-38
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FNQRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSK++AMSDYITKVKQL E AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAAA 88

[Close]
BLAST of Carg19492-RA vs. TrEMBL
Match: tr|M0SQ12|M0SQ12_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103982003 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.5e-38
Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
           AVE KSK+DAMSDYITKVKQL E AAA
Sbjct: 61 MAVEGKSKEDAMSDYITKVKQLLEEAAA 88

The following BLAST results are available for this feature:
BLAST of Carg19492-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022923252.18.6e-42100.00acyl-CoA-binding protein [Cucurbita moschata] >XP_022965372.1 acyl-CoA-binding p... [more]
XP_022145449.18.1e-4094.38acyl-CoA-binding protein [Momordica charantia][more]
XP_022937196.11.4e-3996.63acyl-CoA-binding domain-containing protein 1 [Cucurbita moschata] >XP_023540555.... [more]
XP_023005811.11.4e-3996.63acyl-CoA-binding domain-containing protein 1-like [Cucurbita maxima][more]
XP_008448583.13.4e-3891.01PREDICTED: acyl-CoA-binding protein [Cucumis melo][more]
BLAST of Carg19492-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31812.14.9e-3172.73acyl-CoA-binding protein 6[more]
AT5G53470.18.1e-1042.67acyl-CoA binding protein 1[more]
AT4G27780.11.3e-0739.13acyl-CoA binding protein 2[more]
AT3G05420.26.4e-0733.33acyl-CoA binding protein 4[more]
AT5G27630.11.4e-0635.21acyl-CoA binding protein 5[more]
BLAST of Carg19492-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q75G87|ACBP3_ORYSJ3.3e-3786.36Acyl-CoA-binding domain-containing protein 3 OS=Oryza sativa subsp. japonica OX=... [more]
sp|O04066|ACBP_RICCO3.3e-3785.39Acyl-CoA-binding protein OS=Ricinus communis OX=3988 PE=3 SV=1[more]
sp|Q84SC3|ACBP1_ORYSJ9.7e-3785.23Acyl-CoA-binding domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=... [more]
sp|Q5VRM0|ACBP2_ORYSJ1.3e-3376.40Acyl-CoA-binding domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=... [more]
sp|O22643|ACBP_FRIAG1.7e-3379.31Acyl-CoA-binding protein OS=Fritillaria agrestis OX=64177 GN=ACABP PE=3 SV=1[more]
BLAST of Carg19492-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BKW8|A0A1S3BKW8_CUCME2.2e-3891.01acyl-CoA-binding protein OS=Cucumis melo OX=3656 GN=LOC103490717 PE=4 SV=1[more]
tr|A0A2P4GPK5|A0A2P4GPK5_QUESU2.9e-3891.01Acyl-coa-binding protein OS=Quercus suber OX=58331 GN=CFP56_33020 PE=4 SV=1[more]
tr|A0A2C9UIZ2|A0A2C9UIZ2_MANES2.9e-3892.05Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G182400 PE=4 SV=... [more]
tr|K9ZUG4|K9ZUG4_VERFO5.0e-3892.05Acyl-CoA binding protein 6 OS=Vernicia fordii OX=73154 GN=ACBP6 PE=2 SV=1[more]
tr|M0SQ12|M0SQ12_MUSAM6.5e-3893.18Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103982... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000062fatty-acyl-CoA binding
Vocabulary: INTERPRO
TermDefinition
IPR035984Acyl-CoA-binding_sf
IPR022408Acyl-CoA-binding_prot_CS
IPR014352FERM/acyl-CoA-bd_prot_sf
IPR000582Acyl-CoA-binding_protein
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0000062 fatty-acyl-CoA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg19492Carg19492gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg19492-RACarg19492-RA-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg19492-RA.three_prime_UTR.1Carg19492-RA.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg19492-RA.CDS.4Carg19492-RA.CDS.4CDS
Carg19492-RA.CDS.3Carg19492-RA.CDS.3CDS
Carg19492-RA.CDS.2Carg19492-RA.CDS.2CDS
Carg19492-RA.CDS.1Carg19492-RA.CDS.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg19492-RA.five_prime_UTR.1Carg19492-RA.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg19492-RA.exon.4Carg19492-RA.exon.4exon
Carg19492-RA.exon.3Carg19492-RA.exon.3exon
Carg19492-RA.exon.2Carg19492-RA.exon.2exon
Carg19492-RA.exon.1Carg19492-RA.exon.1exon


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000582Acyl-CoA-binding protein, ACBPPRINTSPR00689ACOABINDINGPcoord: 21..39
score: 62.41
coord: 65..82
score: 50.0
coord: 44..59
score: 52.08
coord: 4..19
score: 43.45
IPR000582Acyl-CoA-binding protein, ACBPPFAMPF00887ACBPcoord: 5..82
e-value: 1.9E-27
score: 95.2
IPR000582Acyl-CoA-binding protein, ACBPPROSITEPS51228ACB_2coord: 3..88
score: 39.304
IPR014352FERM/acyl-CoA-binding protein superfamilyGENE3DG3DSA:1.20.80.10coord: 1..89
e-value: 1.2E-32
score: 113.7
NoneNo IPR availablePANTHERPTHR23310ACYL-COA-BINDING PROTEIN, ACBPcoord: 1..88
NoneNo IPR availablePANTHERPTHR23310:SF67SUBFAMILY NOT NAMEDcoord: 1..88
IPR022408Acyl-CoA-binding protein, ACBP, conserved sitePROSITEPS00880ACB_1coord: 21..39
IPR035984Acyl-CoA binding protein superfamilySUPERFAMILYSSF47027Acyl-CoA binding proteincoord: 3..83