Carg19253-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCCGAAGAAATCCTCCCTCTTTTCGATCTATTCTGGTTTCAGAGCGCGGTTTTCACCGGGAAACCGCTTTTACCGACTCGCTTCGAGTCGCCGGAAAACCGCTTACAGAGTCCGGTAATGCAAGTGGTAAAGGTGAGATCTCAAAGCGAGTATCCGCTGAGCTCGAACTTCGTACCTCCGGAGACCGCTTATTACTCCGCCAATCAAAAGCTTCAGCCCATTCTCTCCGGTAAGGTAACGGAATTTTCCGGCGGCGGAGAGGGGAAACCGGCGAAGAAGAAATCGGAAGGGAGTGAAAAGGAGAGAAGAAGAAAAAGGGGGAGAGGGCTGAGTAAGAGCTTATCGGACCTTGAATTTGAAGAATTAAAAGGTTTTATGGATTTGGGATTTGTGTTCAGTGAGGAAGATAAGAAGAATTCGAGTTTAGCTTCGATAATTCCAGGGTTGCAGAGATTGGGGAAGAAAACAGAGGAAGAAGAAGGGATTGAAAGTGGGGTTTCGAGGCCGTATTTATCTGAAGCTTGGAAGGCGGTCGAGGAAGAAGAAGAGAAGAGGAGTCTGATGAAATGGAGAGTTCCGGATTTGGGTGCGACGGAAATGGACATGAAAGATCATCTCAAGTTCTGGGCTCATACAGTTGCTTCCACTGTCAGATAA ATGGCGGCCGAAGAAATCCTCCCTCTTTTCGATCTATTCTGGTTTCAGAGCGCGGTTTTCACCGGGAAACCGCTTTTACCGACTCGCTTCGAGTCGCCGGAAAACCGCTTACAGAGTCCGGTAATGCAAGTGGTAAAGGTGAGATCTCAAAGCGAGTATCCGCTGAGCTCGAACTTCGTACCTCCGGAGACCGCTTATTACTCCGCCAATCAAAAGCTTCAGCCCATTCTCTCCGGTAAGGTAACGGAATTTTCCGGCGGCGGAGAGGGGAAACCGGCGAAGAAGAAATCGGAAGGGAGTGAAAAGGAGAGAAGAAGAAAAAGGGGGAGAGGGCTGAGTAAGAGCTTATCGGACCTTGAATTTGAAGAATTAAAAGGTTTTATGGATTTGGGATTTGTGTTCAGTGAGGAAGATAAGAAGAATTCGAGTTTAGCTTCGATAATTCCAGGGTTGCAGAGATTGGGGAAGAAAACAGAGGAAGAAGAAGGGATTGAAAGTGGGGTTTCGAGGCCGTATTTATCTGAAGCTTGGAAGGCGGTCGAGGAAGAAGAAGAGAAGAGGAGTCTGATGAAATGGAGAGTTCCGGATTTGGGTGCGACGGAAATGGACATGAAAGATCATCTCAAGTTCTGGGCTCATACAGTTGCTTCCACTGTCAGATAA ATGGCGGCCGAAGAAATCCTCCCTCTTTTCGATCTATTCTGGTTTCAGAGCGCGGTTTTCACCGGGAAACCGCTTTTACCGACTCGCTTCGAGTCGCCGGAAAACCGCTTACAGAGTCCGGTAATGCAAGTGGTAAAGGTGAGATCTCAAAGCGAGTATCCGCTGAGCTCGAACTTCGTACCTCCGGAGACCGCTTATTACTCCGCCAATCAAAAGCTTCAGCCCATTCTCTCCGGTAAGGTAACGGAATTTTCCGGCGGCGGAGAGGGGAAACCGGCGAAGAAGAAATCGGAAGGGAGTGAAAAGGAGAGAAGAAGAAAAAGGGGGAGAGGGCTGAGTAAGAGCTTATCGGACCTTGAATTTGAAGAATTAAAAGGTTTTATGGATTTGGGATTTGTGTTCAGTGAGGAAGATAAGAAGAATTCGAGTTTAGCTTCGATAATTCCAGGGTTGCAGAGATTGGGGAAGAAAACAGAGGAAGAAGAAGGGATTGAAAGTGGGGTTTCGAGGCCGTATTTATCTGAAGCTTGGAAGGCGGTCGAGGAAGAAGAAGAGAAGAGGAGTCTGATGAAATGGAGAGTTCCGGATTTGGGTGCGACGGAAATGGACATGAAAGATCATCTCAAGTTCTGGGCTCATACAGTTGCTTCCACTGTCAGATAA MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFVPPETAYYSANQKLQPILSGKVTEFSGGGEGKPAKKKSEGSEKERRRKRGRGLSKSLSDLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGVSRPYLSEAWKAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR
BLAST of Carg19253-RA vs. NCBI nr
Match: XP_022952129.1 (uncharacterized protein LOC111454895 [Cucurbita moschata]) HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98 Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Carg19253-RA vs. NCBI nr
Match: XP_023554329.1 (uncharacterized protein LOC111811624 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96 Identity = 200/220 (90.91%), Postives = 201/220 (91.36%), Query Frame = 0
BLAST of Carg19253-RA vs. NCBI nr
Match: XP_022969253.1 (uncharacterized protein LOC111468311 [Cucurbita maxima]) HSP 1 Score: 349.7 bits (896), Expect = 7.0e-93 Identity = 201/223 (90.13%), Postives = 203/223 (91.03%), Query Frame = 0
BLAST of Carg19253-RA vs. NCBI nr
Match: XP_022147984.1 (uncharacterized protein LOC111016778 [Momordica charantia]) HSP 1 Score: 246.9 bits (629), Expect = 6.4e-62 Identity = 146/241 (60.58%), Postives = 159/241 (65.98%), Query Frame = 0
BLAST of Carg19253-RA vs. NCBI nr
Match: KGN43634.1 (hypothetical protein Csa_7G049160 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 3.5e-60 Identity = 160/226 (70.80%), Postives = 175/226 (77.43%), Query Frame = 0
BLAST of Carg19253-RA vs. TAIR10
Match: AT2G42760.1 (unknown protein) HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23 Identity = 60/119 (50.42%), Postives = 76/119 (63.87%), Query Frame = 0
BLAST of Carg19253-RA vs. TrEMBL
Match: tr|A0A0A0K3T7|A0A0A0K3T7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049160 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 2.3e-60 Identity = 160/226 (70.80%), Postives = 175/226 (77.43%), Query Frame = 0
BLAST of Carg19253-RA vs. TrEMBL
Match: tr|A0A1S3C1U3|A0A1S3C1U3_CUCME (uncharacterized protein LOC103495495 OS=Cucumis melo OX=3656 GN=LOC103495495 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.3e-58 Identity = 133/225 (59.11%), Postives = 150/225 (66.67%), Query Frame = 0
BLAST of Carg19253-RA vs. TrEMBL
Match: tr|A0A1S3CCC8|A0A1S3CCC8_CUCME (uncharacterized protein LOC103499218 OS=Cucumis melo OX=3656 GN=LOC103499218 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53 Identity = 129/226 (57.08%), Postives = 153/226 (67.70%), Query Frame = 0
BLAST of Carg19253-RA vs. TrEMBL
Match: tr|A0A0A0LGR8|A0A0A0LGR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058630 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.4e-51 Identity = 128/227 (56.39%), Postives = 148/227 (65.20%), Query Frame = 0
BLAST of Carg19253-RA vs. TrEMBL
Match: tr|A0A061E4F7|A0A061E4F7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_008922 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.3e-38 Identity = 111/239 (46.44%), Postives = 141/239 (59.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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