Carg19253 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19253
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF1685 family protein
Location	Cucurbita_argyrosperma_scaffold_099 : 506829 .. 507491 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCGAAGAAATCCTCCCTCTTTTCGATCTATTCTGGTTTCAGAGCGCGGTTTTCACCGGGAAACCGCTTTTACCGACTCGCTTCGAGTCGCCGGAAAACCGCTTACAGAGTCCGGTAATGCAAGTGGTAAAGGTGAGATCTCAAAGCGAGTATCCGCTGAGCTCGAACTTCGTACCTCCGGAGACCGCTTATTACTCCGCCAATCAAAAGCTTCAGCCCATTCTCTCCGGTAAGGTAACGGAATTTTCCGGCGGCGGAGAGGGGAAACCGGCGAAGAAGAAATCGGAAGGGAGTGAAAAGGAGAGAAGAAGAAAAAGGGGGAGAGGGCTGAGTAAGAGCTTATCGGACCTTGAATTTGAAGAATTAAAAGGTTTTATGGATTTGGGATTTGTGTTCAGTGAGGAAGATAAGAAGAATTCGAGTTTAGCTTCGATAATTCCAGGGTTGCAGAGATTGGGGAAGAAAACAGAGGAAGAAGAAGGGATTGAAAGTGGGGTTTCGAGGCCGTATTTATCTGAAGCTTGGAAGGCGGTCGAGGAAGAAGAAGAGAAGAGGAGTCTGATGAAATGGAGAGTTCCGGATTTGGGTGCGACGGAAATGGACATGAAAGATCATCTCAAGTTCTGGGCTCATACAGTTGCTTCCACTGTCAGATAA

mRNA sequence

ATGGCGGCCGAAGAAATCCTCCCTCTTTTCGATCTATTCTGGTTTCAGAGCGCGGTTTTCACCGGGAAACCGCTTTTACCGACTCGCTTCGAGTCGCCGGAAAACCGCTTACAGAGTCCGGTAATGCAAGTGGTAAAGGTGAGATCTCAAAGCGAGTATCCGCTGAGCTCGAACTTCGTACCTCCGGAGACCGCTTATTACTCCGCCAATCAAAAGCTTCAGCCCATTCTCTCCGGTAAGGTAACGGAATTTTCCGGCGGCGGAGAGGGGAAACCGGCGAAGAAGAAATCGGAAGGGAGTGAAAAGGAGAGAAGAAGAAAAAGGGGGAGAGGGCTGAGTAAGAGCTTATCGGACCTTGAATTTGAAGAATTAAAAGGTTTTATGGATTTGGGATTTGTGTTCAGTGAGGAAGATAAGAAGAATTCGAGTTTAGCTTCGATAATTCCAGGGTTGCAGAGATTGGGGAAGAAAACAGAGGAAGAAGAAGGGATTGAAAGTGGGGTTTCGAGGCCGTATTTATCTGAAGCTTGGAAGGCGGTCGAGGAAGAAGAAGAGAAGAGGAGTCTGATGAAATGGAGAGTTCCGGATTTGGGTGCGACGGAAATGGACATGAAAGATCATCTCAAGTTCTGGGCTCATACAGTTGCTTCCACTGTCAGATAA

Coding sequence (CDS)

ATGGCGGCCGAAGAAATCCTCCCTCTTTTCGATCTATTCTGGTTTCAGAGCGCGGTTTTCACCGGGAAACCGCTTTTACCGACTCGCTTCGAGTCGCCGGAAAACCGCTTACAGAGTCCGGTAATGCAAGTGGTAAAGGTGAGATCTCAAAGCGAGTATCCGCTGAGCTCGAACTTCGTACCTCCGGAGACCGCTTATTACTCCGCCAATCAAAAGCTTCAGCCCATTCTCTCCGGTAAGGTAACGGAATTTTCCGGCGGCGGAGAGGGGAAACCGGCGAAGAAGAAATCGGAAGGGAGTGAAAAGGAGAGAAGAAGAAAAAGGGGGAGAGGGCTGAGTAAGAGCTTATCGGACCTTGAATTTGAAGAATTAAAAGGTTTTATGGATTTGGGATTTGTGTTCAGTGAGGAAGATAAGAAGAATTCGAGTTTAGCTTCGATAATTCCAGGGTTGCAGAGATTGGGGAAGAAAACAGAGGAAGAAGAAGGGATTGAAAGTGGGGTTTCGAGGCCGTATTTATCTGAAGCTTGGAAGGCGGTCGAGGAAGAAGAAGAGAAGAGGAGTCTGATGAAATGGAGAGTTCCGGATTTGGGTGCGACGGAAATGGACATGAAAGATCATCTCAAGTTCTGGGCTCATACAGTTGCTTCCACTGTCAGATAA

Protein sequence

MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFVPPETAYYSANQKLQPILSGKVTEFSGGGEGKPAKKKSEGSEKERRRKRGRGLSKSLSDLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGVSRPYLSEAWKAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR

Homology

[Close]

BLAST of Carg19253 vs. NCBI nr
Match: XP_022952129.1 (uncharacterized protein LOC111454895 [Cucurbita moschata])

HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFV 60
           MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNF 
Sbjct: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFA 60

Query: 61  PPETAYYSANQKLQPILSGKVTEFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLE 120
           PPETAYYSANQKLQPILSGKVTEFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLE
Sbjct: 61  PPETAYYSANQKLQPILSGKVTEFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLE 120

Query: 121 FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGVSRPYLSEAWKAV 180
           FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGVSRPYLSEAWKAV
Sbjct: 121 FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGVSRPYLSEAWKAV 180

Query: 181 EEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
           EEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR
Sbjct: 181 EEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 220

[Close]

BLAST of Carg19253 vs. NCBI nr
Match: XP_023554329.1 (uncharacterized protein LOC111811624 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96
Identity = 200/220 (90.91%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFV 60
           MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNF 
Sbjct: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFA 60

Query: 61  PPETAYYSANQKLQPILSGKVTEFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLE 120
           PPET YYSANQKLQPILSGKVTEF+G              XXXXXXXXXXXXX   SDLE
Sbjct: 61  PPETVYYSANQKLQPILSGKVTEFAGEEEGKPAKKKPEGSXXXXXXXXXXXXXKSLSDLE 120

Query: 121 FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGVSRPYLSEAWKAV 180
           FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGVSRPYLSEAWKAV
Sbjct: 121 FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGVSRPYLSEAWKAV 180

Query: 181 EEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
           EEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR
Sbjct: 181 EEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 220

[Close]

BLAST of Carg19253 vs. NCBI nr
Match: XP_022969253.1 (uncharacterized protein LOC111468311 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 7.0e-93
Identity = 201/223 (90.13%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFV 60
           MAAEEIL LFDLFWFQSAVFTG PLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNF 
Sbjct: 1   MAAEEILSLFDLFWFQSAVFTGNPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFA 60

Query: 61  PPETAYYSANQKLQPILSGKVTEFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLE 120
           PPETAYYS NQKLQPILSGKVTEFSG           XXXXXXXXXXXXXXXXX  SDLE
Sbjct: 61  PPETAYYSTNQKLQPILSGKVTEFSGCGGGKPAKKKPXXXXXXXXXXXXXXXXXSLSDLE 120

Query: 121 FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKT---EEEEGIESGVSRPYLSEAW 180
           FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLG++T   EEEEGIESGVSRPYLSEAW
Sbjct: 121 FEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGERTEEHEEEEGIESGVSRPYLSEAW 180

Query: 181 KAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
           KAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR
Sbjct: 181 KAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 223

[Close]

BLAST of Carg19253 vs. NCBI nr
Match: XP_022147984.1 (uncharacterized protein LOC111016778 [Momordica charantia])

HSP 1 Score: 246.9 bits (629), Expect = 6.4e-62
Identity = 146/241 (60.58%), Postives = 159/241 (65.98%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTR-----FESPENRLQSPVMQVVKVRSQSEYPL 60
           MA+EEIL LFD FWFQ  VF GKPLL T+       +PEN  +SP+MQV++ RSQSEY L
Sbjct: 1   MASEEILTLFDQFWFQHVVFAGKPLLRTQRATKPSNAPENSSESPIMQVIQGRSQSEYLL 60

Query: 61  SSNFVPPETAYYS-----ANQKLQPILSGKVTEFSGGXXXXXXXXXXXXXXXXXXXXXXX 120
            S+F  PETAYYS      N+KLQ ILSG+VTEFSG                        
Sbjct: 61  GSDFPAPETAYYSTGSIPTNRKLQTILSGEVTEFSGERGGKPAKKKLGGNEEKLRKRRGR 120

Query: 121 XXXXXXSDLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKK----------TEE 180
                 SDLEFEELKGFMDLGFVFSEED KNSSLASIIPGLQRLG+K             
Sbjct: 121 GLSKSLSDLEFEELKGFMDLGFVFSEED-KNSSLASIIPGLQRLGRKXXXXXXXXXXXXX 180

Query: 181 EEGIESGVSRPYLSEAWKAVEEEEEKRSLMKWRVPDLG-ATEMDMKDHLKFWAHTVASTV 221
                  VSRPYLSEAW+A +EE EKR LMKWRVPDLG ATEMDMKDHLKFWAHTVASTV
Sbjct: 181 XXXXXXXVSRPYLSEAWEADDEENEKRILMKWRVPDLGAATEMDMKDHLKFWAHTVASTV 240

[Close]

BLAST of Carg19253 vs. NCBI nr
Match: KGN43634.1 (hypothetical protein Csa_7G049160 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 3.5e-60
Identity = 160/226 (70.80%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSS-NF 60
           MAAEEILPLFDLFWFQ A+F+ K  L T F       QSPV QV+K+RSQSEY L+S +F
Sbjct: 1   MAAEEILPLFDLFWFQRAIFSRKQHLKTCF-------QSPVKQVLKMRSQSEYLLNSKDF 60

Query: 61  VPPETAYYSANQKLQPILSGKVTEFSGG----XXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            PPETA  ++NQKL+ ILSGKVTEF G        XXXXXXXXXXXXXXXXXXX      
Sbjct: 61  PPPETA-LNSNQKLETILSGKVTEFGGNEEGQATKXXXXXXXXXXXXXXXXXXXKGLSKS 120

Query: 121 XSDLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGV-SRPYLS 180
            SDLEFEELKGFMDLGFVFSEEDK +S+L SIIPGL RLG K  EE+  E+GV  RPYLS
Sbjct: 121 LSDLEFEELKGFMDLGFVFSEEDKNDSNLGSIIPGLHRLGPKKTEEKRSENGVLRRPYLS 180

Query: 181 EAWKAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
           EAWKA+EEE EK  LMKWRVP LGATEMD+K HLKFWAHTVASTVR
Sbjct: 181 EAWKAIEEENEKMILMKWRVPSLGATEMDIKHHLKFWAHTVASTVR 218

[Close]

BLAST of Carg19253 vs. TAIR10
Match: AT2G42760.1 (unknown protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 60/119 (50.42%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 117 SDLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGK-----------KTEEEEGIE 176
           SDLE+EELKGFMDLGFVFSE+D K+S L SI+PGLQRL K                    
Sbjct: 148 SDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPGLQRLVKXXXXXXXXXXXXXXXXXXXX 207

Query: 177 SGVSRPYLSEAWKAVEEEEEKRSL---MKWRVP-DLGATEMDMKDHLKFWAHTVASTVR 221
           +  +RPYLSEAW      + K+ +   +KWRVP    A+E+D+KD+L+ WAH VAST+R
Sbjct: 208 NRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNLRLWAHAVASTIR 266

[Close]

BLAST of Carg19253 vs. TrEMBL
Match: tr|A0A0A0K3T7|A0A0A0K3T7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049160 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.3e-60
Identity = 160/226 (70.80%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSS-NF 60
           MAAEEILPLFDLFWFQ A+F+ K  L T F       QSPV QV+K+RSQSEY L+S +F
Sbjct: 1   MAAEEILPLFDLFWFQRAIFSRKQHLKTCF-------QSPVKQVLKMRSQSEYLLNSKDF 60

Query: 61  VPPETAYYSANQKLQPILSGKVTEFSGG----XXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            PPETA  ++NQKL+ ILSGKVTEF G        XXXXXXXXXXXXXXXXXXX      
Sbjct: 61  PPPETA-LNSNQKLETILSGKVTEFGGNEEGQATKXXXXXXXXXXXXXXXXXXXKGLSKS 120

Query: 121 XSDLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGV-SRPYLS 180
            SDLEFEELKGFMDLGFVFSEEDK +S+L SIIPGL RLG K  EE+  E+GV  RPYLS
Sbjct: 121 LSDLEFEELKGFMDLGFVFSEEDKNDSNLGSIIPGLHRLGPKKTEEKRSENGVLRRPYLS 180

Query: 181 EAWKAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
           EAWKA+EEE EK  LMKWRVP LGATEMD+K HLKFWAHTVASTVR
Sbjct: 181 EAWKAIEEENEKMILMKWRVPSLGATEMDIKHHLKFWAHTVASTVR 218

[Close]

BLAST of Carg19253 vs. TrEMBL
Match: tr|A0A1S3C1U3|A0A1S3C1U3_CUCME (uncharacterized protein LOC103495495 OS=Cucumis melo OX=3656 GN=LOC103495495 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.3e-58
Identity = 133/225 (59.11%), Postives = 150/225 (66.67%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSSNFV 60
           MAAEEILPLFDLFWFQ A+F  KPLL T F+       SPVM   K+RSQSEY L+S   
Sbjct: 1   MAAEEILPLFDLFWFQQAIFPRKPLLKTCFQG------SPVM---KMRSQSEYLLNSKDF 60

Query: 61  PPETAYYSANQKLQPILSGKVTEFSGG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           PP     ++NQKL+ +LSG+VTEF G                                  
Sbjct: 61  PPPVTTLNSNQKLETVLSGQVTEFGGSGEGKATKKEMKKLEGNENKIRRKKKRKGLSKSL 120

Query: 121 SDLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEEEEGIESGV-SRPYLSE 180
           SDLEFEELKGFMDLGFVFSEEDK +S+L SIIPGL RLG +  EE+  E+GV  RPYLSE
Sbjct: 121 SDLEFEELKGFMDLGFVFSEEDKNDSNLGSIIPGLHRLGPQITEEKRNENGVLRRPYLSE 180

Query: 181 AWKAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
           AW+A+EEE EK  LMKWRVP LGATEMD+K HLKFWAHTVASTVR
Sbjct: 181 AWEAIEEENEKMVLMKWRVPSLGATEMDIKHHLKFWAHTVASTVR 216

[Close]

BLAST of Carg19253 vs. TrEMBL
Match: tr|A0A1S3CCC8|A0A1S3CCC8_CUCME (uncharacterized protein LOC103499218 OS=Cucumis melo OX=3656 GN=LOC103499218 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53
Identity = 129/226 (57.08%), Postives = 153/226 (67.70%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSS--N 60
           MAAEEILPLFDLFWFQ A+F  KPLL T   +PE   QS         S+SEY +SS  N
Sbjct: 1   MAAEEILPLFDLFWFQRAIFASKPLLKTHSSAPEIHFQS---------SESEYAVSSSKN 60

Query: 61  FVPPETAYYSA-NQKLQPILSGKVTEFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 120
           F   +TA +SA NQKL+ I+SGKV +FS                               S
Sbjct: 61  FPASKTAVHSANNQKLETIVSGKVRDFS----------VEGNNEKMKIRGKVKGLSKSLS 120

Query: 121 DLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLG-KKTEEEEGIESGV-SRPYLSE 180
           +LEFEELKGFMDLGFVFSEEDK +++LASIIPGLQR+G KK E+++ IE G+  RPYLSE
Sbjct: 121 ELEFEELKGFMDLGFVFSEEDKNDTNLASIIPGLQRIGQKKEEKQKQIEDGILKRPYLSE 180

Query: 181 AWKAVEEE-EEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
           AW+ VE+E ++KR LMKWR+P LGATEMD+K HLK WAHTVASTVR
Sbjct: 181 AWEDVEKENDKKRILMKWRIPSLGATEMDIKHHLKSWAHTVASTVR 207

[Close]

BLAST of Carg19253 vs. TrEMBL
Match: tr|A0A0A0LGR8|A0A0A0LGR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058630 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.4e-51
Identity = 128/227 (56.39%), Postives = 148/227 (65.20%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFESPENRLQSPVMQVVKVRSQSEYPLSS--N 60
           MAAE+ILPLFDLFWFQ  +F   PLL T   +PE   QSP          SEY +SS  N
Sbjct: 1   MAAEKILPLFDLFWFQREIFARNPLLKTHSSAPEIHFQSP---------DSEYAVSSSMN 60

Query: 61  FVPPETAYYSA-NQKLQPILSGKVTEFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 120
           F   +TA +S  NQKL+ I+S KV EFS                               S
Sbjct: 61  FPASKTAVHSTNNQKLETIVSSKVREFS----------VEENYEKMKIMGKVKRLSKSLS 120

Query: 121 DLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLG-KKTEEEEGIESGV--SRPYLS 180
           +LEFEELKGFMDLGFVFSEEDK +++LASIIPGLQR G KK E+++ IE GV   RPYLS
Sbjct: 121 ELEFEELKGFMDLGFVFSEEDKNDTNLASIIPGLQRFGEKKEEKQKQIEDGVLLKRPYLS 180

Query: 181 EAWKAVEEE-EEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
           EAW+ VE+E ++KR LMKWRVP LGATEMD+K HLKFWAHTVASTVR
Sbjct: 181 EAWEDVEKENDKKRILMKWRVPSLGATEMDIKHHLKFWAHTVASTVR 208

[Close]

BLAST of Carg19253 vs. TrEMBL
Match: tr|A0A061E4F7|A0A061E4F7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_008922 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.3e-38
Identity = 111/239 (46.44%), Postives = 141/239 (59.00%), Query Frame = 0


Query: 1   MAAEEILPLFDLFWFQSAVFTGKPLLPTRFES-------PENRLQSPVMQVVKVRSQSEY 60
           MAAEE+L LFD++WF+  +F+ KP+  ++  S        E  L+ P +  + VRS S+ 
Sbjct: 34  MAAEEVLKLFDVYWFEQPIFSEKPVSRSQETSQDHKERVEERELKLPRISTLHVRSMSDL 93

Query: 61  PL------SSNFVPPETAYYSANQKLQPILSGK-VTEFSGG--XXXXXXXXXXXXXXXXX 120
            L      SS  + P +       +LQ ILSGK V E +                     
Sbjct: 94  ALNATVSFSSGSLSPNSVL--TTPRLQTILSGKDVNEDNADVKKEKMEEAAAKPILVERR 153

Query: 121 XXXXXXXXXXXXSDLEFEELKGFMDLGFVFSEEDKKNSSLASIIPGLQRLGKKTEE--EE 180
                       S+LEFEEL+GFMDLGFVFSEED K+SSL SIIPGLQ+LGKKTEE  EE
Sbjct: 154 SKTRTKGSSRSLSELEFEELQGFMDLGFVFSEED-KDSSLVSIIPGLQKLGKKTEESREE 213

Query: 181 GI-ESGVSRPYLSEAWKAVEEEEEKRSLMKWRVPDLGATEMDMKDHLKFWAHTVASTVR 221
            I ++ VSRPYLSEAW+  +  + K  LM WR+P +G  E+DMKDHL+FWAHTVASTVR
Sbjct: 214 NIGQTVVSRPYLSEAWEVWDRRKVKNPLMNWRIPTMG-NEVDMKDHLRFWAHTVASTVR 268

The following BLAST results are available for this feature:

BLAST of Carg19253 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952129.1	2.5e-98	99.55	uncharacterized protein LOC111454895 [Cucurbita moschata]	[more]
XP_023554329.1	1.4e-96	90.91	uncharacterized protein LOC111811624 [Cucurbita pepo subsp. pepo]	[more]
XP_022969253.1	7.0e-93	90.13	uncharacterized protein LOC111468311 [Cucurbita maxima]	[more]
XP_022147984.1	6.4e-62	60.58	uncharacterized protein LOC111016778 [Momordica charantia]	[more]
KGN43634.1	3.5e-60	70.80	hypothetical protein Csa_7G049160 [Cucumis sativus]	[more]

BLAST of Carg19253 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42760.1	2.4e-23	50.42	unknown protein	[more]

BLAST of Carg19253 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19253 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K3T7\|A0A0A0K3T7_CUCSA	2.3e-60	70.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049160 PE=4 SV=1	[more]
tr\|A0A1S3C1U3\|A0A1S3C1U3_CUCME	6.3e-58	59.11	uncharacterized protein LOC103495495 OS=Cucumis melo OX=3656 GN=LOC103495495 PE=...	[more]
tr\|A0A1S3CCC8\|A0A1S3CCC8_CUCME	4.7e-53	57.08	uncharacterized protein LOC103499218 OS=Cucumis melo OX=3656 GN=LOC103499218 PE=...	[more]
tr\|A0A0A0LGR8\|A0A0A0LGR8_CUCSA	3.4e-51	56.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058630 PE=4 SV=1	[more]
tr\|A0A061E4F7\|A0A061E4F7_THECC	3.3e-38	46.44	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_008922 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19253-RA	Carg19253-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 118..151 e-value: 5.2E-5 score: 22.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..111
None	No IPR available	PANTHER	PTHR31865:SF7	SUBFAMILY NOT NAMED	coord: 1..220
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 1..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19253	Cla002244	Watermelon (97103) v1	carwmB0878
Carg19253	Csa7G049160	Cucumber (Chinese Long) v2	carcuB0891
Carg19253	MELO3C018718	Melon (DHL92) v3.5.1	carmeB0865
Carg19253	ClCG07G002630	Watermelon (Charleston Gray)	carwcgB0855
Carg19253	CSPI07G04820	Wild cucumber (PI 183967)	carcpiB0911
Carg19253	Cucsa.195740	Cucumber (Gy14) v1	carcgyB0998
Carg19253	CmaCh19G010100	Cucurbita maxima (Rimu)	carcmaB1214
Carg19253	CmoCh19G010460	Cucurbita moschata (Rifu)	carcmoB1183
Carg19253	Lsi11G017200	Bottle gourd (USVL1VR-Ls)	carlsiB796
Carg19253	Cp4.1LG15g08240	Cucurbita pepo (Zucchini)	carcpeB1220
Carg19253	CsGy7G004360	Cucumber (Gy14) v2	carcgybB0864
Carg19253	MELO3C018718.2	Melon (DHL92) v3.6.1	carmedB0874
Carg19253	CsaV3_7G005740	Cucumber (Chinese Long) v3	carcucB0915
Carg19253	Cla97C07G130960	Watermelon (97103) v2	carwmbB0918
Carg19253	Bhi05G001674	Wax gourd	carwgoB1023

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19253	Melon (DHL92) v3.5.1	carmeB0864
Carg19253	Melon (DHL92) v3.6.1	carmedB0873
Carg19253	Watermelon (Charleston Gray)	carwcgB0854
Carg19253	Watermelon (97103) v1	carwmB0877
Carg19253	Watermelon (97103) v2	carwmbB0917