Carg19089-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCAGCAAAGAAAGAGGCTTTGAATGTTGAGAGTAAGATATTGCCAGAGGAGTTTCTATCTGAATTTCCATGGCTGAAAGCTTCGATCATGGTGGAGAATGATAAGTTCTGTTCAGAAGGGTTAATGCGGCTTCTAAGAGAAAGAATGCCATCAATTGGCAGTGAAAAGGCAAAGGAATTGGATGAAAAATGGAGGAAATTGGGAGAGAGTGAAGTGGAATTGTATCTGAAGAAGGTTGAATTAGTTAGGGAACAATGTAAACTAATATTGGATTCAATGGGGAAGGCAAGGAGAGCTAGCTAA ATGGAAGCAGCAAAGAAAGAGGCTTTGAATGTTGAGAGTAAGATATTGCCAGAGGAGTTTCTATCTGAATTTCCATGGCTGAAAGCTTCGATCATGGTGGAGAATGATAAGTTCTGTTCAGAAGGGTTAATGCGGCTTCTAAGAGAAAGAATGCCATCAATTGGCAGTGAAAAGGCAAAGGAATTGGATGAAAAATGGAGGAAATTGGGAGAGAGTGAAGTGGAATTGTATCTGAAGAAGGTTGAATTAGTTAGGGAACAATGTAAACTAATATTGGATTCAATGGGGAAGGCAAGGAGAGCTAGCTAA ATGGAAGCAGCAAAGAAAGAGGCTTTGAATGTTGAGAGTAAGATATTGCCAGAGGAGTTTCTATCTGAATTTCCATGGCTGAAAGCTTCGATCATGGTGGAGAATGATAAGTTCTGTTCAGAAGGGTTAATGCGGCTTCTAAGAGAAAGAATGCCATCAATTGGCAGTGAAAAGGCAAAGGAATTGGATGAAAAATGGAGGAAATTGGGAGAGAGTGAAGTGGAATTGTATCTGAAGAAGGTTGAATTAGTTAGGGAACAATGTAAACTAATATTGGATTCAATGGGGAAGGCAAGGAGAGCTAGCTAA MEAAKKEALNVESKILPEEFLSEFPWLKASIMVENDKFCSEGLMRLLRERMPSIGSEKAKELDEKWRKLGESEVELYLKKVELVREQCKLILDSMGKARRAS
BLAST of Carg19089-RA vs. NCBI nr
Match: XP_022930845.1 (STOREKEEPER protein-like [Cucurbita moschata]) HSP 1 Score: 198.0 bits (502), Expect = 1.6e-47 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Carg19089-RA vs. NCBI nr
Match: XP_023531444.1 (STOREKEEPER protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196.8 bits (499), Expect = 3.5e-47 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Carg19089-RA vs. NCBI nr
Match: XP_022988806.1 (STOREKEEPER protein-like [Cucurbita maxima]) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46 Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Carg19089-RA vs. NCBI nr
Match: XP_022969118.1 (STOREKEEPER protein-like [Cucurbita maxima]) HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39 Identity = 89/105 (84.76%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of Carg19089-RA vs. NCBI nr
Match: XP_022952607.1 (STOREKEEPER protein-like [Cucurbita moschata]) HSP 1 Score: 170.6 bits (431), Expect = 2.7e-39 Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of Carg19089-RA vs. Swiss-Prot
Match: sp|Q94IK2|STK_SOLTU (STOREKEEPER protein OS=Solanum tuberosum OX=4113 GN=STK PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.7e-05 Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 0
BLAST of Carg19089-RA vs. TrEMBL
Match: tr|A0A1S3C0T6|A0A1S3C0T6_CUCME (mediator-associated protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495567 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38 Identity = 83/93 (89.25%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg19089-RA vs. TrEMBL
Match: tr|A0A0A0K1N4|A0A0A0K1N4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044900 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-33 Identity = 73/93 (78.49%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of Carg19089-RA vs. TrEMBL
Match: tr|A0A2P6S2H8|A0A2P6S2H8_ROSCH (Putative transcription factor GeBP family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0160351 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.8e-11 Identity = 40/83 (48.19%), Postives = 61/83 (73.49%), Query Frame = 0
BLAST of Carg19089-RA vs. TrEMBL
Match: tr|A0A2R6QW89|A0A2R6QW89_ACTCH (STOREKEEPER protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13527 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.6e-10 Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of Carg19089-RA vs. TrEMBL
Match: tr|A0A2R6QCE2|A0A2R6QCE2_ACTCH (STOREKEEPER protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc19060 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-09 Identity = 42/82 (51.22%), Postives = 52/82 (63.41%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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