Carg17559-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTGTAAGTCACTTGTTGCCTTTAGCTACCTATGCCTCGTCATGGCCGTGTCCTCTATCGCTCAAAGTCCTCCCGTGCTCGACACCGAGGGCCGACCTTTACAGATCAACGTCGAGTACTTCATCAAGCCTGCTGTCACTGATGTCGCTGGAAATCTCACCCTATTAACCCGCAAAGGCGATCAGTGCCCATTTCATGTTGGCCAAGTGCCACTTCGTTCACAAGAAATAGGTATTATTACATCACAATCGAACTCAAAAACTTTTGATTAGTGATACCATTAGAAAACTCTTGATTATGTTACGAATTCTTAACCATAGGTTTCGGGGTCACCTTTACGCCCTACCTACCGGGTGAAGATACGATCAGAGAAGGGAGGGATTTGAAGGTCGTGTTTCAAGCGTTCTCGATCTGCATAACGTCGACTGCATGGAGAGTCGGGGAGACAGATCCTACCACTGGAAGGAGGTTTGTTGAGACCGGGGACGACGACACTGCCACCGGGTACTTTAGGATCGATAGGGACAACTTTGGCGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCTATTAGAGGGAGGCCAAGGTGTGGAAGAGCTGGAATTTTGATTGAGAAAGGCTTGAGGCTGTTGGCTTTGGATGGCTCAGCGTTTCCTTTTGAGTTTGTGAGAGCTTGA ATGTTGTGTAAGTCACTTGTTGCCTTTAGCTACCTATGCCTCGTCATGGCCGTGTCCTCTATCGCTCAAAGTCCTCCCGTGCTCGACACCGAGGGCCGACCTTTACAGATCAACGTCGAGTACTTCATCAAGCCTGCTGTCACTGATGTCGCTGGAAATCTCACCCTATTAACCCGCAAAGGCGATCAGTGCCCATTTCATGTTGGCCAAGTGCCACTTCGTTCACAAGAAATAGGTTTCGGGGTCACCTTTACGCCCTACCTACCGGGTGAAGATACGATCAGAGAAGGGAGGGATTTGAAGGTCGTGTTTCAAGCGTTCTCGATCTGCATAACGTCGACTGCATGGAGAGTCGGGGAGACAGATCCTACCACTGGAAGGAGGTTTGTTGAGACCGGGGACGACGACACTGCCACCGGGTACTTTAGGATCGATAGGGACAACTTTGGCGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCTATTAGAGGGAGGCCAAGGTGTGGAAGAGCTGGAATTTTGATTGAGAAAGGCTTGAGGCTGTTGGCTTTGGATGGCTCAGCGTTTCCTTTTGAGTTTGTGAGAGCTTGA ATGTTGTGTAAGTCACTTGTTGCCTTTAGCTACCTATGCCTCGTCATGGCCGTGTCCTCTATCGCTCAAAGTCCTCCCGTGCTCGACACCGAGGGCCGACCTTTACAGATCAACGTCGAGTACTTCATCAAGCCTGCTGTCACTGATGTCGCTGGAAATCTCACCCTATTAACCCGCAAAGGCGATCAGTGCCCATTTCATGTTGGCCAAGTGCCACTTCGTTCACAAGAAATAGGTTTCGGGGTCACCTTTACGCCCTACCTACCGGGTGAAGATACGATCAGAGAAGGGAGGGATTTGAAGGTCGTGTTTCAAGCGTTCTCGATCTGCATAACGTCGACTGCATGGAGAGTCGGGGAGACAGATCCTACCACTGGAAGGAGGTTTGTTGAGACCGGGGACGACGACACTGCCACCGGGTACTTTAGGATCGATAGGGACAACTTTGGCGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCTATTAGAGGGAGGCCAAGGTGTGGAAGAGCTGGAATTTTGATTGAGAAAGGCTTGAGGCTGTTGGCTTTGGATGGCTCAGCGTTTCCTTTTGAGTTTGTGAGAGCTTGA MLCKSLVAFSYLCLVMAVSSIAQSPPVLDTEGRPLQINVEYFIKPAVTDVAGNLTLLTRKGDQCPFHVGQVPLRSQEIGFGVTFTPYLPGEDTIREGRDLKVVFQAFSICITSTAWRVGETDPTTGRRFVETGDDDTATGYFRIDRDNFGVYNIGWCPSDVPIRGRPRCGRAGILIEKGLRLLALDGSAFPFEFVRA
BLAST of Carg17559-RA vs. NCBI nr
Match: XP_022938134.1 (alpha-amylase/subtilisin inhibitor-like [Cucurbita moschata]) HSP 1 Score: 410.2 bits (1053), Expect = 3.9e-111 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg17559-RA vs. NCBI nr
Match: XP_023521354.1 (alpha-amylase/subtilisin inhibitor-like [Cucurbita pepo subsp. pepo] >XP_023538197.1 alpha-amylase/subtilisin inhibitor-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407.5 bits (1046), Expect = 2.5e-110 Identity = 194/197 (98.48%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg17559-RA vs. NCBI nr
Match: XP_022965952.1 (kunitz trypsin inhibitor 1-like [Cucurbita maxima]) HSP 1 Score: 398.3 bits (1022), Expect = 1.5e-107 Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0
BLAST of Carg17559-RA vs. NCBI nr
Match: XP_022150807.1 (miraculin-like [Momordica charantia]) HSP 1 Score: 332.0 bits (850), Expect = 1.4e-87 Identity = 159/197 (80.71%), Postives = 174/197 (88.32%), Query Frame = 0
BLAST of Carg17559-RA vs. NCBI nr
Match: XP_004139193.1 (PREDICTED: endogenous alpha-amylase/subtilisin inhibitor-like [Cucumis sativus] >KGN60878.1 hypothetical protein Csa_2G021000 [Cucumis sativus]) HSP 1 Score: 327.4 bits (838), Expect = 3.3e-86 Identity = 155/196 (79.08%), Postives = 172/196 (87.76%), Query Frame = 0
BLAST of Carg17559-RA vs. TAIR10
Match: AT1G73260.1 (kunitz trypsin inhibitor 1) HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16 Identity = 59/195 (30.26%), Postives = 90/195 (46.15%), Query Frame = 0
BLAST of Carg17559-RA vs. TAIR10
Match: AT1G73325.1 (Kunitz family trypsin and protease inhibitor protein) HSP 1 Score: 48.5 bits (114), Expect = 5.4e-06 Identity = 43/165 (26.06%), Postives = 66/165 (40.00%), Query Frame = 0
BLAST of Carg17559-RA vs. Swiss-Prot
Match: sp|Q8RXD5|KTI1_ARATH (Kunitz trypsin inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=KTI1 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.6e-15 Identity = 59/195 (30.26%), Postives = 90/195 (46.15%), Query Frame = 0
BLAST of Carg17559-RA vs. Swiss-Prot
Match: sp|P07596|IAAS_HORVU (Alpha-amylase/subtilisin inhibitor OS=Hordeum vulgare OX=4513 PE=1 SV=2) HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14 Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = 0
BLAST of Carg17559-RA vs. Swiss-Prot
Match: sp|P29421|IAAS_ORYSJ (Alpha-amylase/subtilisin inhibitor OS=Oryza sativa subsp. japonica OX=39947 GN=RASI PE=1 SV=2) HSP 1 Score: 79.7 bits (195), Expect = 4.0e-14 Identity = 52/137 (37.96%), Postives = 70/137 (51.09%), Query Frame = 0
BLAST of Carg17559-RA vs. Swiss-Prot
Match: sp|P16347|IAAS_WHEAT (Endogenous alpha-amylase/subtilisin inhibitor OS=Triticum aestivum OX=4565 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12 Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 0
BLAST of Carg17559-RA vs. Swiss-Prot
Match: sp|P32765|ASP_THECC (21 kDa seed protein OS=Theobroma cacao OX=3641 GN=ASP PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.5e-10 Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 0
BLAST of Carg17559-RA vs. TrEMBL
Match: tr|A0A0A0LGB4|A0A0A0LGB4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021000 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 2.2e-86 Identity = 155/196 (79.08%), Postives = 172/196 (87.76%), Query Frame = 0
BLAST of Carg17559-RA vs. TrEMBL
Match: tr|A0A1S3C0M7|A0A1S3C0M7_CUCME (endogenous alpha-amylase/subtilisin inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103495287 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 6.2e-81 Identity = 148/197 (75.13%), Postives = 163/197 (82.74%), Query Frame = 0
BLAST of Carg17559-RA vs. TrEMBL
Match: tr|D1KFM3|D1KFM3_9ROSI (Kunitz-type protease inhibitor KPI-F4 OS=Populus trichocarpa x Populus deltoides OX=3695 PE=2 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 5.3e-56 Identity = 119/195 (61.03%), Postives = 136/195 (69.74%), Query Frame = 0
BLAST of Carg17559-RA vs. TrEMBL
Match: tr|A0A0A0LIK2|A0A0A0LIK2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021500 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 5.3e-56 Identity = 110/182 (60.44%), Postives = 128/182 (70.33%), Query Frame = 0
BLAST of Carg17559-RA vs. TrEMBL
Match: tr|G0Z2L7|G0Z2L7_POPNI (Kunitz-type trypsin inhibitor C5 OS=Populus nigra OX=3691 PE=2 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 5.3e-56 Identity = 118/195 (60.51%), Postives = 136/195 (69.74%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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