Carg16286-RA (mRNA) Silver-seed gourd

NameCarg16286-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionATP-dependent Clp protease proteolytic subunit
LocationCucurbita_argyrosperma_scaffold_077 : 523433 .. 527226 (+)
Sequence length885
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTTCTTTCACGGTGTTCTACTCTTGTTCCTCACGCCTCCTCTCTCAGTCTTCCGAATTCTCATGGAAAATCTTCGGTTTTCTATCCCAAACGCAAATCCAGCCTCTCATTTCCTTCGTCTTCATCAGTCCTCAAAGCAACCGCTCTTAAATCCTCCAGAACCCTAGCTCCGCCGTGCTCTGTCCTTATGACGACTCCACAGACGCCGGATTCCGCCCGGACTGGCGCCGAGACTGATGCCATGGGACTGCTTCTCAGAGAGAGGATCGTTTTCTTGGGGAACAACATTGATGACTTTGTGGCCGATGCTATTATCAGCCAGCTCTTACTCTTGGATGCTCAGGATTCTACTAAGGATATCAGACTCTTCATTAATTCCTCCGGCGGCTCTCTGAGGTATGATTTTTTTGTACAGTGTAGTTGGTGAAGATGTGGAATATGAGATTCAGGTTCATTTTCATTCTGCAATTCGAACAAAATATTCATAATATATAGCAATACTCGTGTAATGTAGAGTGAGTTATCATTAGAAATGAATGATGAAAATAATTTGAAACAAGCAAGAACCGATTGTTTGGGAGTTAGTTTTCCTTGTTACATGGAACTGAGCTGGTCCTCTTATTTCCTTAGGTGGCTTGGTTGTTGGTAATCTGAGAACTAGAAACACCGTTCTCCTCTCAAAGTGGATGTGCTATGTTCATATTCTTGTGTGAAAAGAACGCCCTTAGAAGAGGCTTAATCAAGAGTCAAATTGGGATCGGCAACCTTTGGAGAAACTTAGATCCTAGAATTGACATTGGTAAAACAAAAGATTTCTTTGATCATATTGTTTTCTTGAAGAATGGCAATGGTCTGAGTCATTAATTTTGGGCAAACGCCTGGCTCGATCCTTCTCGTCTTAGCCACATTTTCCAAATACCTTCTCTATTTCGAATGCTGAAGACTTTCTTATAAGAGATTTTTGGAATGGGGCAGTCTAAACACGGGATTTTCAGCTCAGAAGGGGCCCTTGTGATAGAGAACCAGAAGTATGGTTGATCCTCATTCAAAAGATGAAAAGCAGCCATCTAAATCTTAGTAAGGACAAATTTTGTGGGAAGTTTTGAGATATTTGGCTTGTTTCCTTGCAAATCTGCCGCTCTCCAGCCGATCAGTAGAGAAGGCAGGTTGGATAAACCCTATTTTCTCTTATTTGGAAAGTAAAAGACTTTGTTCTTCCTTTGGGCCATGGCTTACAAAAGTCCAAACACTTGTGATTTGGATTCGAAAGATGAAACTTTCCATGGCTTTATATAGCAATATATTGCACAAAAGATTTGCATGTGAAGGAACCCCATTTCCTATAAGGACCAATTTCCCAAATCATACTCTTTTGGGAAAAGGGCTAACACTTTTCCTAAGAGACGCACGCTGGCAAGATCAGAATTCCTTTTCAACAATTAAACATTCAGGTTTCTTGTTCTTTCCCTATGACATTTAGTGGCTGATGATAAAGTGTAGAGGTGGTGGAAGACTATACCAAAGTTTCCCTAATTACTAAAGTATGGCCGTGAAGCATCTATAATCAGTCTCTCCCTTTTCCTTTGTCGTACATTTTGAATGACTTGCTAGGAGTTGTGAAAAAGAGTTGAGAAGTAGGAGAGTTTAAGCATCTTAACACACCGTTCGGAATTGTGCGTTTACAAAACATCTATATGCTATTATTCTAATTGTATCAAGTTTTACTTTGAGCTAGATAAAACTCGGTGCTACACGAGTACAGATTTATCTTGAAATCAATTAATATGTGTGTGTGTGTATGCATATATTGATGCAACCAATCACTTACAACTAGTTTATGCATTGGAGTCAGAACTGAATAGTTCTTTTCAAACTTCAATGGAGAAATTTTGCCTCCTTTAGATTTTTCCTTTCTTTGGTGAGGGGATATGCCTCTTGGGCCACCACTGGGGAAATTTTGATGTGCTTGGGTCTGTGTCTAGAGATGAATGTATTCGTCTACTCTACTTTTCAACATGAATGGGAAAATCAACAAACTATTGGAACACATACATATCTCCCTGATTGTTTATTTAATTTCTGGTTTATTCTCGTTTCCATGATTTGCAGGGTCTTTTTGTACCTTGGGAAATCTTAGAGTAACTTAGTTTATATTGGCTTACAAATAACCTTTTCATGATCTTTTCTCCGCATCTTTGATTCACAACTAATTTTAATACGGTAAACCTGTCAACCACCAAATCATCGTTTTTCAAAATGTATATCGGTGTGTAAATACATAAGGATGCTCATGAGAGGCGTCAGCAGAAGAAACTATGTACTCTGCCTGGGTCCAGTTCATTTGTCAGCAAAGGTTATGTTTTAAGTTCCACATCGAGTTATCCTCATTTTGATTAAGAAACACACCTTCCAACTTCGTACTAATCCACATATATCCCAAGTTTGCGGTGTCTTCTTTCAACCAATCGCTGATTACCTCTCTTTTGTACAAGCAATGGAGAATAGATTTTATACAACATTTGACTCAGATCCCCACATCGATTGGGGAGGAGAACGAAACATTCTATGTAAGGGTGTGGAAACCTCTCCCTAACAGACGCGTTTTAGAAACCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAGTATCTGCTAGCAAGGGGCTTGAACTATTACAAATGGTATTAGAGCCAGACATCGGGCAATGTACAAGCAATGACGATGGGCCCTGAAGGGAGGTGGACACAAGACGGTGTGCCAGCAAGGACGCCCCAAAGGGGGTGGATTGGGGGTCCCACATCAGTTGGAGAAGGGAACGAGTGCCAGCAAGGATGCTGGGCCCCGAAGGGGGGTGGATTGTGAAATCCCACATCGGTTGGGGAGAAGAACGAAGTATTCTTTATAAGGGTGTGGAAACCTCTCCCGAAAGGAAAATCCGAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTATTACAAAACTAGTCATCTCCTAAATTAGACTAAGGGCATAAAGTAGTTTTTTTTTCCCTTGTCTCCCAGGACTTAAGATTTTAGAAGTGGTAGTGTCATCTTTATAAGTATACGAATTCTCTTGACATTATTCAATCACATGCTCGAGATATCAACTGAATAGGCTTTTTAATATATACTTCTGTTTTCCTTCTTCTGTCTTGGGAATTTAGGCTGGGAGGACGTTCAGCTTTCAATGTGACTGCTGGGAATTTAGGTTAATATTTGTTGTTTGGTTGCTGTTCATTAACCGACTGATTCTGTCTACTAATGTTGTTTTGATTAGTGCTACAATGGCTATCATCGACGTCTTACAGCTTGTGAGAGCTGATGTCTCCACAATTGCACTGGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTTTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGCCAAGCAATAGATGTCGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATAATCAGAATTATCTCCAACTACACTGGCCATCCATTTGAGAAGGTCCAAAAAGATATCGATCGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAAGACACCATTATACCTCTCATGCAACTGCCAGAAAGAGTGAAGGCAACGTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGACGTCCCCGATGACGAGATATACTAG

mRNA sequence

ATGGAGCTTCTTTCACGGTGTTCTACTCTTGTTCCTCACGCCTCCTCTCTCAGTCTTCCGAATTCTCATGGAAAATCTTCGGTTTTCTATCCCAAACGCAAATCCAGCCTCTCATTTCCTTCGTCTTCATCAGTCCTCAAAGCAACCGCTCTTAAATCCTCCAGAACCCTAGCTCCGCCGTGCTCTGTCCTTATGACGACTCCACAGACGCCGGATTCCGCCCGGACTGGCGCCGAGACTGATGCCATGGGACTGCTTCTCAGAGAGAGGATCGTTTTCTTGGGGAACAACATTGATGACTTTGTGGCCGATGCTATTATCAGCCAGCTCTTACTCTTGGATGCTCAGGATTCTACTAAGGATATCAGACTCTTCATTAATTCCTCCGGCGGCTCTCTGAGTGCTACAATGGCTATCATCGACGTCTTACAGCTTGTGAGAGCTGATGTCTCCACAATTGCACTGGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTTTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGCCAAGCAATAGATGTCGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATAATCAGAATTATCTCCAACTACACTGGCCATCCATTTGAGAAGGTCCAAAAAGATATCGATCGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAAGACACCATTATACCTCTCATGCAACTGCCAGAAAGAGTGAAGGCAACGTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGACGTCCCCGATGACGAGATATACTAG

Coding sequence (CDS)

ATGGAGCTTCTTTCACGGTGTTCTACTCTTGTTCCTCACGCCTCCTCTCTCAGTCTTCCGAATTCTCATGGAAAATCTTCGGTTTTCTATCCCAAACGCAAATCCAGCCTCTCATTTCCTTCGTCTTCATCAGTCCTCAAAGCAACCGCTCTTAAATCCTCCAGAACCCTAGCTCCGCCGTGCTCTGTCCTTATGACGACTCCACAGACGCCGGATTCCGCCCGGACTGGCGCCGAGACTGATGCCATGGGACTGCTTCTCAGAGAGAGGATCGTTTTCTTGGGGAACAACATTGATGACTTTGTGGCCGATGCTATTATCAGCCAGCTCTTACTCTTGGATGCTCAGGATTCTACTAAGGATATCAGACTCTTCATTAATTCCTCCGGCGGCTCTCTGAGTGCTACAATGGCTATCATCGACGTCTTACAGCTTGTGAGAGCTGATGTCTCCACAATTGCACTGGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTTTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGCCAAGCAATAGATGTCGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATAATCAGAATTATCTCCAACTACACTGGCCATCCATTTGAGAAGGTCCAAAAAGATATCGATCGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAAGACACCATTATACCTCTCATGCAACTGCCAGAAAGAGTGAAGGCAACGTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGACGTCCCCGATGACGAGATATACTAG

Protein sequence

MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKSSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
BLAST of Carg16286-RA vs. NCBI nr
Match: XP_022937184.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 551.6 bits (1420), Expect = 1.6e-153
Identity = 291/294 (98.98%), Postives = 292/294 (99.32%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKSSRTLAPP 60
           MELLSRCSTLVPHAS+LSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALK SRTLAPP
Sbjct: 1   MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPP 60

Query: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120
           CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180
           DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGG SGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 294

BLAST of Carg16286-RA vs. NCBI nr
Match: XP_023540498.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.1 bits (1398), Expect = 5.8e-151
Identity = 286/294 (97.28%), Postives = 289/294 (98.30%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKSSRTLAPP 60
           MELLSRCSTLVPHASSL LPN HGKSSVFYPK KSSLSFPSSSSVLKATALK SRTLAPP
Sbjct: 1   MELLSRCSTLVPHASSLGLPNFHGKSSVFYPKCKSSLSFPSSSSVLKATALKPSRTLAPP 60

Query: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120
           CSVLMT PQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDS+K
Sbjct: 61  CSVLMTNPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSSK 120

Query: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180
           DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+IRIISNYTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVIRIISNYTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDIPDDEIY 294

BLAST of Carg16286-RA vs. NCBI nr
Match: XP_023005152.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 538.9 bits (1387), Expect = 1.1e-149
Identity = 284/294 (96.60%), Postives = 288/294 (97.96%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKSSRTLAPP 60
           MELLSRCSTLVPHASSL  PN HGKSSVFYPKRKSSLSFPSSSSVLKATALK  R LAPP
Sbjct: 1   MELLSRCSTLVPHASSLGHPNFHGKSSVFYPKRKSSLSFPSSSSVLKATALKPLRALAPP 60

Query: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120
           CSVLMTTPQTPDSAR+GAETDAMGLLLRERIVFLGNNIDDF+ADAIISQLLLLDAQDS+K
Sbjct: 61  CSVLMTTPQTPDSARSGAETDAMGLLLRERIVFLGNNIDDFLADAIISQLLLLDAQDSSK 120

Query: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180
           DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+IRIISNYTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVIRIISNYTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 294

BLAST of Carg16286-RA vs. NCBI nr
Match: XP_022145352.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia])

HSP 1 Score: 506.1 bits (1302), Expect = 7.8e-140
Identity = 267/294 (90.82%), Postives = 277/294 (94.22%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKSSRTLAPP 60
           MELLSRCSTL+PHASSLSLPNSH K S FYPK KSSLSFPS+ SVLKATALK SRTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120
           CSVLMT PQTPD AR GAETDAMGLLLRERIVFLGN+IDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180
           DIRLFINS GGSLSATMAI DV+QLVRADVSTI LGIAASTASIILGGGTKGKR AMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+ RIIS +TGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKD+IIPLM +PERVKA+LNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

BLAST of Carg16286-RA vs. NCBI nr
Match: XP_008448589.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 498.4 bits (1282), Expect = 1.6e-137
Identity = 262/294 (89.12%), Postives = 278/294 (94.56%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKSSRTLAPP 60
           MELLSRCSTL+P ASSL LPNSHGK S F+PK KS+LSFPS+SSVLK TALK SRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPD++R GAETDAMGLLLRERIVFLGN+IDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180
           DIRLFINS+GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+ RIIS +TGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVID+D+IIPL+ +PERVKATLNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

BLAST of Carg16286-RA vs. TAIR10
Match: AT5G45390.1 (CLP protease P4)

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-97
Identity = 182/226 (80.53%), Postives = 202/226 (89.38%), Query Frame = 0

Query: 69  QTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINS 128
           QT +SA  GAE+D MGLLLRERIVFLG++IDDFVADAI+SQLLLLDA+D  KDI+LFINS
Sbjct: 67  QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINS 126

Query: 129 SGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPL 188
            GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILG GTKGKRFAMPN RIM+HQPL
Sbjct: 127 PGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPL 186

Query: 189 GGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLI 248
           GGASGQAIDVEIQA+E+MHNKNN+  II+  T   FE+V KDIDRDRYMSPIEAVEYGLI
Sbjct: 187 GGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLI 246

Query: 249 DGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           DGVID D+IIPL  +P+RVK  +NYEEISKDP KFLTP++PDDEIY
Sbjct: 247 DGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

BLAST of Carg16286-RA vs. TAIR10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3)

HSP 1 Score: 191.8 bits (486), Expect = 5.9e-49
Identity = 110/254 (43.31%), Postives = 162/254 (63.78%), Query Frame = 0

Query: 16  SLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATA----LKSSRTLA-PPCSVLM----- 75
           SL L +S   + +       +L+FP  +  +  T+    ++SS +L+ PP   L      
Sbjct: 4   SLRLASSSTSNPICLLNPGKNLNFPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDV 63

Query: 76  ------TTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDST 135
                 +  Q+P    +  E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS 
Sbjct: 64  SSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSE 123

Query: 136 KDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPN 195
           +DI LFINS GGS++A M I D ++  +ADVST+ LG+AAS  + +L  G+KGKR+ MPN
Sbjct: 124 RDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPN 183

Query: 196 ARIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSP 254
           +++M+HQPLG A G+A ++ I+ RE+M++K  + +I S  TG P  +++ D DRD +++P
Sbjct: 184 SKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNP 243

BLAST of Carg16286-RA vs. TAIR10
Match: AT1G02560.1 (nuclear encoded CLP protease 5)

HSP 1 Score: 179.1 bits (453), Expect = 4.0e-45
Identity = 87/167 (52.10%), Postives = 124/167 (74.25%), Query Frame = 0

Query: 86  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQL 145
           L + RI+  G  +DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI D ++ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 146 VRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGASGQAIDVEIQAREI 205
           +R DVST+ +G+AAS  + +L  GTKGKR+++PN+RIM+HQPLGGA G   D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 206 MHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI 253
           +H+K N+   ++ +TG   EK+ +D DRD +MS  EA EYGLIDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

BLAST of Carg16286-RA vs. TAIR10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6)

HSP 1 Score: 154.8 bits (390), Expect = 8.0e-38
Identity = 77/188 (40.96%), Postives = 115/188 (61.17%), Query Frame = 0

Query: 68  PQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFIN 127
           P  P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N
Sbjct: 101 PVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLN 160

Query: 128 SSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQP 187
             GGS  + +AI D +  ++  V T+A G+AAS  +++L GG KG R+AMPN R+M+HQP
Sbjct: 161 CPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQP 220

Query: 188 LGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGL 247
             G  G   DV  Q  E +  +  I R+ + +TG P EKVQ+  +RDR++S  EA+E+GL
Sbjct: 221 QTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGL 280

Query: 248 IDGVIDKD 256
           IDG+++ +
Sbjct: 281 IDGLLETE 288

BLAST of Carg16286-RA vs. TAIR10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7)

HSP 1 Score: 145.2 bits (365), Expect = 6.3e-35
Identity = 78/215 (36.28%), Postives = 132/215 (61.40%), Query Frame = 0

Query: 41  SSSSVLKATALKSSRTLAPPCSVLMTTPQTPDSARTGAET-DAMGLLLRERIVFLGNNID 100
           S + +L +T    + ++A         P   + +  G    D    LL+ERI+ +   I+
Sbjct: 7   SGAKMLSSTPSSMATSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIN 66

Query: 101 DFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAA 160
           D  +  +++QLL L++++ +K I +++NS GG ++A +AI D +Q +R+ +STI LG AA
Sbjct: 67  DDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAA 126

Query: 161 STASIILGGGTKGKRFAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNY 220
           S AS++L  G KG+R ++PNA +M+HQP GG SGQA D+ I  ++I+   + +  +   +
Sbjct: 127 SMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKH 186

Query: 221 TGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDK 255
           TG P + V  ++DRD +M+P EA  +G+ID VID+
Sbjct: 187 TGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221

BLAST of Carg16286-RA vs. Swiss-Prot
Match: sp|Q94B60|CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.1e-96
Identity = 182/226 (80.53%), Postives = 202/226 (89.38%), Query Frame = 0

Query: 69  QTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINS 128
           QT +SA  GAE+D MGLLLRERIVFLG++IDDFVADAI+SQLLLLDA+D  KDI+LFINS
Sbjct: 67  QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINS 126

Query: 129 SGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPL 188
            GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILG GTKGKRFAMPN RIM+HQPL
Sbjct: 127 PGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPL 186

Query: 189 GGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLI 248
           GGASGQAIDVEIQA+E+MHNKNN+  II+  T   FE+V KDIDRDRYMSPIEAVEYGLI
Sbjct: 187 GGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLI 246

Query: 249 DGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           DGVID D+IIPL  +P+RVK  +NYEEISKDP KFLTP++PDDEIY
Sbjct: 247 DGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

BLAST of Carg16286-RA vs. Swiss-Prot
Match: sp|Q3ANI8|CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) OX=110662 GN=clpP1 PE=3 SV=2)

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-52
Identity = 100/181 (55.25%), Postives = 136/181 (75.14%), Query Frame = 0

Query: 73  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGS 132
           S R     D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INS GGS
Sbjct: 16  SGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGS 75

Query: 133 LSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGAS 192
           ++A +AI D +Q V  DV TI  G+AAS  + +L GGTKGKR A+PNARIM+HQPLGGA 
Sbjct: 76  VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQ 135

Query: 193 GQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI 252
           GQA+D+EIQA+EI++ K  +  +++ +TG P +K+ +D DRD ++SP EAVEYGLID V+
Sbjct: 136 GQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195

Query: 253 D 254
           D
Sbjct: 196 D 196

BLAST of Carg16286-RA vs. Swiss-Prot
Match: sp|Q3B0U1|CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.5e-52
Identity = 99/181 (54.70%), Postives = 135/181 (74.59%), Query Frame = 0

Query: 73  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGS 132
           S R     D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++NS GGS
Sbjct: 16  SGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGS 75

Query: 133 LSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGAS 192
           ++A +AI D +Q V  DV TI  G+AAS  + +L GGTKGKR A+PNARIM+HQPLGGA 
Sbjct: 76  VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQ 135

Query: 193 GQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI 252
           GQA+D+EIQA+EI+  K  +  +++ +TG P +K+ +D DRD ++SP EAVEYGLID V+
Sbjct: 136 GQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195

Query: 253 D 254
           D
Sbjct: 196 D 196

BLAST of Carg16286-RA vs. Swiss-Prot
Match: sp|O34125|CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-51
Identity = 102/185 (55.14%), Postives = 138/185 (74.59%), Query Frame = 0

Query: 73  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGS 132
           S R     D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+INS GGS
Sbjct: 45  SGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGS 104

Query: 133 LSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGAS 192
           ++A MAI D +Q V  DV+TI  G+AAS  + +L GG +GKR A+P+ARIM+HQPLGGA 
Sbjct: 105 VTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQ 164

Query: 193 GQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI 252
           GQA+D+EIQAREI+++K+ +  +++ +TG P EK++ D DRD +MSP EA  YGLID V+
Sbjct: 165 GQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

Query: 253 DKDTI 258
            + T+
Sbjct: 225 TRPTM 229

BLAST of Carg16286-RA vs. Swiss-Prot
Match: sp|Q5N1P6|CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-51
Identity = 102/185 (55.14%), Postives = 138/185 (74.59%), Query Frame = 0

Query: 73  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGS 132
           S R     D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+INS GGS
Sbjct: 45  SGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGS 104

Query: 133 LSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGAS 192
           ++A MAI D +Q V  DV+TI  G+AAS  + +L GG +GKR A+P+ARIM+HQPLGGA 
Sbjct: 105 VTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQ 164

Query: 193 GQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI 252
           GQA+D+EIQAREI+++K+ +  +++ +TG P EK++ D DRD +MSP EA  YGLID V+
Sbjct: 165 GQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

Query: 253 DKDTI 258
            + T+
Sbjct: 225 TRPTM 229

BLAST of Carg16286-RA vs. TrEMBL
Match: tr|A0A1S3BJF4|A0A1S3BJF4_CUCME (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490719 PE=3 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 1.1e-137
Identity = 262/294 (89.12%), Postives = 278/294 (94.56%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKSSRTLAPP 60
           MELLSRCSTL+P ASSL LPNSHGK S F+PK KS+LSFPS+SSVLK TALK SRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPD++R GAETDAMGLLLRERIVFLGN+IDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180
           DIRLFINS+GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+ RIIS +TGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVID+D+IIPL+ +PERVKATLNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

BLAST of Carg16286-RA vs. TrEMBL
Match: tr|A0A0A0L3S1|A0A0A0L3S1_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G005040 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 3.4e-131
Identity = 250/294 (85.03%), Postives = 270/294 (91.84%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKSSRTLAPP 60
           MELLSRCSTL PHASSL LPNSHGK S F+PK KS+LSFPS+SSVLK TALK SRTL PP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPD+AR GAETDAMGLLLRERIVFLGN+IDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120

Query: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180
           DIRLFINS+GGSLS+TMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNA
Sbjct: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+N+IRIIS +TGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYG IDGVID+D+IIPLM +P++VK   NY E+ KDP KFLTPDVPDDEI+
Sbjct: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

BLAST of Carg16286-RA vs. TrEMBL
Match: tr|A0A0D2R6I8|A0A0D2R6I8_GOSRA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii OX=29730 GN=B456_004G175000 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 4.7e-109
Identity = 225/298 (75.50%), Postives = 245/298 (82.21%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKA---TALKSSRTL 60
           M LLS  S+L P  SSL L           PK K SL+FP+ S V  A   T L SS  L
Sbjct: 1   MGLLSLSSSLTPSFSSLHLK----------PKHKLSLTFPNPSFVCSAPTSTPLSSSLKL 60

Query: 61  APPC-SVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ 120
            P   S+ ++ PQ+P +A  GAE DAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ
Sbjct: 61  KPTANSLKLSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFA 180
           D TKDIRLFINS GGSLSATMAI DV+QLVRADVST+ +GIAASTASIILGGGTKGKRFA
Sbjct: 121 DPTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTVGIGIAASTASIILGGGTKGKRFA 180

Query: 181 MPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRY 240
           MPN RIM+HQPLGGASGQAIDVEIQAREIMHNKNN+ RIIS  TG PFE+V KDIDRDRY
Sbjct: 181 MPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISASTGRPFEQVLKDIDRDRY 240

Query: 241 MSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           MSPIEAVEYG+IDGVID+D+IIPL  +PERVKA+LNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 MSPIEAVEYGIIDGVIDRDSIIPLEPVPERVKASLNYEEISKDPRKFLTPDIPDDEIY 288

BLAST of Carg16286-RA vs. TrEMBL
Match: tr|A0A1U8IV12|A0A1U8IV12_GOSHI (ATP-dependent Clp protease proteolytic subunit OS=Gossypium hirsutum OX=3635 GN=LOC107900718 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 8.0e-109
Identity = 225/298 (75.50%), Postives = 246/298 (82.55%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKA---TALKSSRTL 60
           M LLS  S+L P     S P+ H K     PK K SL+FP+ S V  A   T L SS  L
Sbjct: 1   MGLLSLSSSLTP-----SFPSLHLK-----PKHKLSLTFPNPSFVCSAPTSTPLSSSLKL 60

Query: 61  APPC-SVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ 120
            P   S+ ++ PQ+P +A  GAE DAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ
Sbjct: 61  KPTANSLKLSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFA 180
           D TKDIRLFINS GGSLSATMAI DV+QLVRADVST+ +GIAASTASIILGGGTKGKRFA
Sbjct: 121 DPTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTVGIGIAASTASIILGGGTKGKRFA 180

Query: 181 MPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRY 240
           MPN RIM+HQPLGGASGQAIDVEIQAREIMHNKNN+ RIIS  TG PFE+V KDIDRDRY
Sbjct: 181 MPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISASTGRPFEQVLKDIDRDRY 240

Query: 241 MSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           MSPIEAVEYG+IDGVID+D+IIPL  +PERVKA+LNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 MSPIEAVEYGIIDGVIDRDSIIPLEPVPERVKASLNYEEISKDPRKFLTPDIPDDEIY 288

BLAST of Carg16286-RA vs. TrEMBL
Match: tr|A0A2P5RSP6|A0A2P5RSP6_GOSBA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium barbadense OX=3634 GN=GOBAR_DD13246 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 8.0e-109
Identity = 225/298 (75.50%), Postives = 246/298 (82.55%), Query Frame = 0

Query: 1   MELLSRCSTLVPHASSLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKA---TALKSSRTL 60
           M LLS  S+L P     S P+ H K     PK K SL+FP+ S V  A   T L SS  L
Sbjct: 1   MGLLSLSSSLTP-----SFPSLHLK-----PKHKLSLTFPNPSFVCSAPTSTPLSSSLKL 60

Query: 61  APPC-SVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ 120
            P   S+ ++ PQ+P +A  GAE DAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ
Sbjct: 61  KPTANSLKLSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFA 180
           D TKDIRLFINS GGSLSATMAI DV+QLVRADVST+ +GIAASTASIILGGGTKGKRFA
Sbjct: 121 DPTKDIRLFINSPGGSLSATMAIYDVVQLVRADVSTVGIGIAASTASIILGGGTKGKRFA 180

Query: 181 MPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRY 240
           MPN RIM+HQPLGGASGQAIDVEIQAREIMHNKNN+ RIIS  TG PFE+V KDIDRDRY
Sbjct: 181 MPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISASTGRPFEQVLKDIDRDRY 240

Query: 241 MSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 295
           MSPIEAVEYG+IDGVID+D+IIPL  +PERVKA+LNYEEISKDPRKFLTPD+PDDEIY
Sbjct: 241 MSPIEAVEYGIIDGVIDRDSIIPLEPVPERVKASLNYEEISKDPRKFLTPDIPDDEIY 288

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022937184.11.6e-15398.98ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita mosch... [more]
XP_023540498.15.8e-15197.28ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita ... [more]
XP_023005152.11.1e-14996.60ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita ... [more]
XP_022145352.17.8e-14090.82ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica chara... [more]
XP_008448589.11.6e-13789.12PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu... [more]
Match NameE-valueIdentityDescription
AT5G45390.11.2e-9780.53CLP protease P4[more]
AT1G66670.15.9e-4943.31CLP protease proteolytic subunit 3[more]
AT1G02560.14.0e-4552.10nuclear encoded CLP protease 5[more]
AT1G11750.28.0e-3840.96CLP protease proteolytic subunit 6[more]
AT5G23140.16.3e-3536.28nuclear-encoded CLP protease P7[more]
Match NameE-valueIdentityDescription
sp|Q94B60|CLPP4_ARATH2.1e-9680.53ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t... [more]
sp|Q3ANI8|CLPP1_SYNSC2.5e-5255.25ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC... [more]
sp|Q3B0U1|CLPP2_SYNS95.5e-5254.70ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC... [more]
sp|O34125|CLPP2_SYNE71.2e-5155.14ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str... [more]
sp|Q5N1P6|CLPP3_SYNP61.2e-5155.14ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain AT... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BJF4|A0A1S3BJF4_CUCME1.1e-13789.12ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A0A0L3S1|A0A0A0L3S1_CUCSA3.4e-13185.03ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa... [more]
tr|A0A0D2R6I8|A0A0D2R6I8_GOSRA4.7e-10975.50ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii OX=29730 G... [more]
tr|A0A1U8IV12|A0A1U8IV12_GOSHI8.0e-10975.50ATP-dependent Clp protease proteolytic subunit OS=Gossypium hirsutum OX=3635 GN=... [more]
tr|A0A2P5RSP6|A0A2P5RSP6_GOSBA8.0e-10975.50ATP-dependent Clp protease proteolytic subunit OS=Gossypium barbadense OX=3634 G... [more]
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom_sf
IPR033135ClpP_His_AS
IPR023562ClpP/TepA
IPR001907ClpP
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0004252 serine-type endopeptidase activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg16286Carg16286gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg16286-RA.exon.1Carg16286-RA.exon.1exon
Carg16286-RA.exon.2Carg16286-RA.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg16286-RA.CDS.1Carg16286-RA.CDS.1CDS
Carg16286-RA.CDS.2Carg16286-RA.CDS.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg16286-RACarg16286-RA-proteinpolypeptide


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 152..169
score: 50.56
coord: 121..141
score: 51.55
coord: 173..192
score: 58.38
coord: 81..96
score: 46.88
coord: 230..249
score: 56.38
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 66..255
score: 36.268
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 81..251
e-value: 1.03743E-93
score: 276.63
NoneNo IPR availableGENE3DG3DSA:3.90.226.10coord: 62..257
e-value: 1.6E-64
score: 219.3
NoneNo IPR availablePANTHERPTHR10381:SF24ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTICcoord: 23..294
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 80..254
e-value: 1.9E-70
score: 236.4
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 23..294
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 174..187
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILYSSF52096ClpP/crotonasecoord: 80..256