Carg16222-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16222-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	nuclear transcription factor Y subunit A-10
Location	Cucurbita_argyrosperma_scaffold_077 : 122414 .. 125243 (-)
Sequence length	969

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTAACTTTTTGTTCATTCGGTTCATTTTCATTTCCATGATCATATTTAAGCTTGCCAAAAAGCATGAAAATAATTAAGAGTTGCTTATAAATGGTGGATTTACAAATTTTCGAGTGACTCAATATCACAAGCATATCTCTAGGCTACTCAAAAGTCGATTAAGAGGTGGCTAGGGAATGGTTTATTCAAAACGAATAGCATAGGTAGGTTGAGGAAGAAGCTGGATACTTCTAATCTGACATGTAGCAAACATATGCTCTGAGGTACTACTATTCAAAATGCGATAGGCCATGGATAACAAATGTTTGTAAGAGGAAACAAGTTAGGGGAGGAGGGACCTAGATTGTTTGTGCTGATGAGCTCGACTTATAGCTTAGTAACGTGACATTAGGGGACTGGAGAAGTCGAGAGGGAAAGTGTATCAGGATGGTATGCTTTCAGTGTTTTGAGTTTGCTTAGGCTGGGAGGGTAGGGAGCTCTTTGAACATCTCCAAGCTTGTGGCCTCATTGTGGATAATGGATATTAAGCTCTATTCAAGACTAACCACTAATAAGTTTCCAACTTCAATATGGGCTTTACTACTACTGAAATAACATGCATCCCAGGTCACCATATAGACTTGACATTAGAGTGCAATCTTCTTGAGCAATTTATGTCCCAATCATCTACTGTTGAAGTACACCCTGTGCAACACAGAAGCCGCACTGCCGGTTGACCCTCTACCCGATGGCAACTATCCCTTTTCTTTTTATGCTTAACTACGAACCTTTGTTCTACTTAATGGGGTACATATACAACCCTCAGACCTAATGGTTAGGTTCGACAGAAGTTCGTGCCGCTTATCCCGGCTACAATATGCTTTTCTTTTGTGTATTTAGTCTTAAAACTGGATCTCCCATTTTCCTCAACTAATATTTCTACCATCCCTTCTTCAGAATATTATTTTCTAGCTAATACTTCATCAAGGATTTAGCTAAAATCTCAATGTTTATGAAACAAGAGGGAAAGAAAGTAGCATGAAACTCAAGGAAGACTATTACCTTTTTCTCTTTTTGTGCTGGCTGAGTTAAAATGTCGAACATAATGGTGAGCTTGTTATCCGATGAGAAAACTCCTCTTGAAACATCCATGCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGGTAGGATCTAAAATGTTAATTGAATTTCCCCCCTAAAACAGTGCTTTATACATATATATGTTACTAATTATGAAGACGAAAATTGTAGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGTATGTTTCCTTCCATTCTTCAACCACTTCCTTTTTACCTTCTTTTTTCCTTGTATGTATTCAATGTGAATTGTATTATATTCATAGATATTTTCCAACAAAAAAAAAAGTTAGATAGGTGCATAAGCAGAGCTAAGTATGCAAAAAAAATAAAAATGGTGAGTGGAAAACAATACAATATAGCCAAAAACCAGAAATGGTGCGAAGGAGATGACACATTTAGGCCTCCTAGATGAATGCTGCCAAAAAAGTTAATAGGAAACACAACTCAGGGTTTCATGTAATGAAGTATGGTAGAGAAGTAATTTTCTTTGAACAATATATTTGTTGATTGGGTTCTGCTATTCATTGTAAGCTATCTGGAAAAGGTCAGTCTGCCTAATCTATGAGCAAAAACTTAACCATTTGCAATAATTAGGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGGTATGTAAGTATAAGTCTTACAGAGGCGTCTGTCCTAGCTTTTGGACACTTTAATATGATATAGTATCCAGCATCATGTTCATTCTGTTGTCTGAACGAACTGTTATTGTGATTTATATGCCTCTGATTGTATCCTTCAGTCCAAATACTTTTCTTTTTCCTGTGCAGAACTAGTATCCACATTATTCCTGCTGATATAGATTGCATATCTGTCTTACAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

mRNA sequence

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

Coding sequence (CDS)

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

Protein sequence

MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLPKWVAAADNCCDLCF

Homology

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BLAST of Carg16222-RA vs. NCBI nr
Match: XP_023539687.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 648.3 bits (1671), Expect = 1.4e-182
Identity = 319/322 (99.07%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQSPLSEYHNRFELGFGQPL C
Sbjct: 61  ATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNRFELGFGQPLIC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 322

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BLAST of Carg16222-RA vs. NCBI nr
Match: XP_022956068.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita moschata])

HSP 1 Score: 643.7 bits (1659), Expect = 3.4e-181
Identity = 316/322 (98.14%), Postives = 318/322 (98.76%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQSPLSEYHN FELGF QPLTC
Sbjct: 61  ATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFSQPLTC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 322

[Close]

BLAST of Carg16222-RA vs. NCBI nr
Match: XP_023005692.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita maxima])

HSP 1 Score: 623.2 bits (1606), Expect = 4.8e-175
Identity = 310/322 (96.27%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQ  HGLEKLNTAPFSIYPGDTKNSV AQK SPVFS    LSEYHN FELGFGQPL C
Sbjct: 61  ATKQTGHGLEKLNTAPFSIYPGDTKNSVGAQKPSPVFS----LSEYHNHFELGFGQPLIC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQ FQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQCFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAA+NCCDLCF
Sbjct: 301 GGHGMVLPKWVAAAENCCDLCF 318

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BLAST of Carg16222-RA vs. NCBI nr
Match: XP_022151376.1 (nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377.1 nuclear transcription factor Y subunit A-10 [Momordica charantia])

HSP 1 Score: 541.2 bits (1393), Expect = 2.4e-150
Identity = 278/329 (84.50%), Postives = 290/329 (88.15%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNG 60
           MAPQTGYLKEHEGIVPNSLGQLSSSP RLWS AFG GS +IFGDFGQ+K    EQL SNG
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWS-AFGQGSQTIFGDFGQLKASSIEQLGSNG 60

Query: 61  KEFAATKQAT----HGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
           KEF   KQA     HGLEK+NTAPFSIYPGD KNSVDAQK SPVFSLQSPLSEYH RFEL
Sbjct: 61  KEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQ 180
           GFGQP+ C NYPYMEQHYGILSAYGPQIPGRVMLPM LTTDD PIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVN 240
           IRAKAMM+NR ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  + K S+  KKVD+VN
Sbjct: 181 IRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN 240

Query: 241 LSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQ 300
           LS+ TGSQCS VLQSESGTLNS NEAK GRGFNL SSEV SMFSRGLQRFQI+H+ PSMQ
Sbjct: 241 LSESTGSQCSVVLQSESGTLNSPNEAK-GRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLC 322
           SLAEIIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLC 327

[Close]

BLAST of Carg16222-RA vs. NCBI nr
Match: XP_008442935.1 (PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo] >XP_008442936.1 PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo])

HSP 1 Score: 537.0 bits (1382), Expect = 4.5e-149
Identity = 273/326 (83.74%), Postives = 290/326 (88.96%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNG 60
           MAPQTG LKEHE I+PNSLGQLS SP RLWS AFG G  SIFGDFGQVK    +QL SNG
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWS-AFGQGPQSIFGDFGQVKASSIQQLGSNG 60

Query: 61  KEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG 120
           KEF  TKQ  +HGL+KLNTAPFSIYPGD K S+DAQK SPVFSLQSPL+EYHNRFELGFG
Sbjct: 61  KEFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFG 120

Query: 121 QPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRA 180
           QPL C NYPYMEQHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRA
Sbjct: 121 QPLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRA 180

Query: 181 KAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSD 240
           KAMM+N+ ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD
Sbjct: 181 KAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSD 240

Query: 241 LTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA 300
            TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLA
Sbjct: 241 STGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLA 300

Query: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 322
           EIIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 324

[Close]

BLAST of Carg16222-RA vs. TAIR10
Match: AT3G05690.1 (nuclear factor Y, subunit A2)

HSP 1 Score: 169.5 bits (428), Expect = 3.4e-42
Identity = 135/324 (41.67%), Postives = 170/324 (52.47%), Query Frame = 0


Query: 22  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLN 81
           L S+P   W  AFG   L   S+ GD   F  VK   +   G+     +  ATH      
Sbjct: 10  LFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATH------ 69

Query: 82  TAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYME-QHYG 141
              FS+  GD K+  +  + H   FS+QSP        ELGF QP     YPY E Q+YG
Sbjct: 70  -LAFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQYYG 129

Query: 142 ILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTR 201
           ++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R R
Sbjct: 130 VVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCR 189

Query: 202 KPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQC 261
           KPY+H SRHLHA+RRPRGSGGRFLN K+Q  E S    KK      +        + SQ 
Sbjct: 190 KPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQN 249

Query: 262 SEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG 320
           SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL      
Sbjct: 250 SEVVHPENGTMNLSN------GLNVSGSEVTSM----------NYFLSSPVHSLG----- 292

[Close]

BLAST of Carg16222-RA vs. TAIR10
Match: AT5G06510.1 (nuclear factor Y, subunit A10)

HSP 1 Score: 168.7 bits (426), Expect = 5.9e-42
Identity = 116/261 (44.44%), Postives = 148/261 (56.70%), Query Frame = 0


Query: 21  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTA 80
           +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T 
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSG------EASDSFTGVKAVTTEAEQGVVDKQTSTT 64

Query: 81  PFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSA 140
            F+  PG  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SA
Sbjct: 65  LFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSA 124

Query: 141 YGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHE 200
           YG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H 
Sbjct: 125 YGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHH 184

Query: 201 SRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLN 260
           SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+N
Sbjct: 185 SRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETIN 235

Query: 261 SQNEAKEGRGFNLLSSEVSSM 275
           S  EA E    NL  S V+SM
Sbjct: 245 SSREANES---NLSDSAVTSM 235

[Close]

BLAST of Carg16222-RA vs. TAIR10
Match: AT2G34720.1 (nuclear factor Y, subunit A4)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 0


Query: 114 FGQPLTCENYPYMEQHY---------------GI-LSAYGPQIPGRVMLPMRLTTDDEPI 173
           + +P+    YPY + +Y               G+ L   G Q PG   +P++    +EP+
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPG---VPLQCDAVEEPV 103

Query: 174 YVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQ 217
           +VNAKQYHGI+RRRQ RAK   +NR  + +KPY+HESRHLHA+RRPRG GGRFLN K +
Sbjct: 104 FVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKE 159

[Close]

BLAST of Carg16222-RA vs. TAIR10
Match: AT1G72830.2 (nuclear factor Y, subunit A3)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-22
Identity = 60/126 (47.62%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 122 NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGII 181
           ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 182 RRRQIRAKAMMKNRPARTRK-PYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKK 234
           RRRQ RAK   +N+  R RK PY+HESRH+HA++RPRGSGGRFLN K    E      ++
Sbjct: 194 RRRQQRAKLEAQNKLIRARKVPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAARE 253

[Close]

BLAST of Carg16222-RA vs. TAIR10
Match: AT1G30500.2 (nuclear factor Y, subunit A7)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-21
Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 123 YPYMEQHYGILSAYGPQIPGRVML----------PMRLTTDDEPIYVNAKQYHGIIRRRQ 182
           YPY + +Y  + A  PQ    V L          P+     +EP++VNAKQYHGI+RRRQ
Sbjct: 58  YPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQ 117

Query: 183 IRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQ 217
            RA+   +N+  ++RKPY+HESRHLHA+RRPRG GGRFLN K +
Sbjct: 118 SRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKE 161

[Close]

BLAST of Carg16222-RA vs. Swiss-Prot
Match: sp|Q9M9X4|NFYA2_ARATH (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-41
Identity = 135/324 (41.67%), Postives = 170/324 (52.47%), Query Frame = 0


Query: 22  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLN 81
           L S+P   W  AFG   L   S+ GD   F  VK   +   G+     +  ATH      
Sbjct: 10  LFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATH------ 69

Query: 82  TAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYME-QHYG 141
              FS+  GD K+  +  + H   FS+QSP        ELGF QP     YPY E Q+YG
Sbjct: 70  -LAFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQYYG 129

Query: 142 ILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTR 201
           ++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R R
Sbjct: 130 VVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCR 189

Query: 202 KPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQC 261
           KPY+H SRHLHA+RRPRGSGGRFLN K+Q  E S    KK      +        + SQ 
Sbjct: 190 KPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQN 249

Query: 262 SEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG 320
           SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL      
Sbjct: 250 SEVVHPENGTMNLSN------GLNVSGSEVTSM----------NYFLSSPVHSLG----- 292

[Close]

BLAST of Carg16222-RA vs. Swiss-Prot
Match: sp|Q8LFU0|NFYAA_ARATH (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=NFYA10 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 116/261 (44.44%), Postives = 148/261 (56.70%), Query Frame = 0


Query: 21  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTA 80
           +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T 
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSG------EASDSFTGVKAVTTEAEQGVVDKQTSTT 64

Query: 81  PFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSA 140
            F+  PG  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SA
Sbjct: 65  LFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSA 124

Query: 141 YGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHE 200
           YG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H 
Sbjct: 125 YGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHH 184

Query: 201 SRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLN 260
           SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+N
Sbjct: 185 SRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETIN 235

Query: 261 SQNEAKEGRGFNLLSSEVSSM 275
           S  EA E    NL  S V+SM
Sbjct: 245 SSREANES---NLSDSAVTSM 235

[Close]

BLAST of Carg16222-RA vs. Swiss-Prot
Match: sp|Q93ZH2|NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-22
Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 122 NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGII 181
           ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 182 RRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKV 234
           RRRQ RAK   +N+  R RKPY+HESRH+HA++RPRGSGGRFLN K    E      ++ 
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQ 253

[Close]

BLAST of Carg16222-RA vs. Swiss-Prot
Match: sp|Q8VY64|NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.5e-21
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 0


Query: 114 FGQPLTCENYPYMEQHY---------------GI-LSAYGPQIPGRVMLPMRLTTDDEPI 173
           + +P+    YPY + +Y               G+ L   G Q PG   +P++    +EP+
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPG---VPLQCDAVEEPV 103

Query: 174 YVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQ 217
           +VNAKQYHGI+RRRQ RAK   +NR  + +KPY+HESRHLHA+RRPRG GGRFLN K +
Sbjct: 104 FVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKE 159

[Close]

BLAST of Carg16222-RA vs. Swiss-Prot
Match: sp|Q9LVJ7|NFYA6_ARATH (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.6e-20
Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 122 NYPYMEQHYGILSAYGPQI----PGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKA 181
           ++PY  QH    +   PQI    P R+ LP  +  ++EPI+VNAKQY  I+RRR+ RAK 
Sbjct: 139 SFPYASQH----TVQHPQIRGLVPSRMPLPHNI-PENEPIFVNAKQYQAILRRRERRAKL 198

Query: 182 MMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVP 226
             +N+  + RKPY+HESRHLHA++R RGSGGRFLN K      SS+ P
Sbjct: 199 EAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSP 241

[Close]

BLAST of Carg16222-RA vs. TrEMBL
Match: tr|A0A1S3B7N7|A0A1S3B7N7_CUCME (nuclear transcription factor Y subunit A-10 OS=Cucumis melo OX=3656 GN=LOC103486690 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 3.0e-149
Identity = 273/326 (83.74%), Postives = 290/326 (88.96%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNG 60
           MAPQTG LKEHE I+PNSLGQLS SP RLWS AFG G  SIFGDFGQVK    +QL SNG
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWS-AFGQGPQSIFGDFGQVKASSIQQLGSNG 60

Query: 61  KEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG 120
           KEF  TKQ  +HGL+KLNTAPFSIYPGD K S+DAQK SPVFSLQSPL+EYHNRFELGFG
Sbjct: 61  KEFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFG 120

Query: 121 QPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRA 180
           QPL C NYPYMEQHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRA
Sbjct: 121 QPLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRA 180

Query: 181 KAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSD 240
           KAMM+N+ ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD
Sbjct: 181 KAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSD 240

Query: 241 LTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA 300
            TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLA
Sbjct: 241 STGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLA 300

Query: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 322
           EIIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 324

[Close]

BLAST of Carg16222-RA vs. TrEMBL
Match: tr|A0A0A0LE75|A0A0A0LE75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782710 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 4.3e-148
Identity = 271/325 (83.38%), Postives = 288/325 (88.62%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKE---QLDSNGK 60
           MAPQTG LKEHE I+PNSLGQLS +P RLWS A G GS SIFGDFGQVK    QL SNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWS-ALGQGSQSIFGDFGQVKASSIQLGSNGK 60

Query: 61  EFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQ 120
           EF  TKQ   HGL+KLNTAPFSIYPGD K S+DAQK SPVFSLQSPL+EYHNRFELGFGQ
Sbjct: 61  EFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAK 180
           PL C NYPYM+QHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDL 240
           AMM+N+ ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD 
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAE 300
           TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLAE
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAE 300

Query: 301 IIDGGGHGMVLPKWVAAADNCCDLC 322
           IIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 IIDGGGHGMVLPKWVAAADNCCDLC 323

[Close]

BLAST of Carg16222-RA vs. TrEMBL
Match: tr|A0A061EVQ6|A0A061EVQ6_THECC (Nuclear transcription factor Y subunit A-10, putative OS=Theobroma cacao OX=3641 GN=TCM_022984 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.9e-85
Identity = 183/330 (55.45%), Postives = 223/330 (67.58%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGD-FGQVKEQL---DSNG 60
           MA QT YLKEH+GIV N +GQL+S PT  W +A  LGS S+ G+  GQ K  L    S+G
Sbjct: 1   MAMQTLYLKEHDGIVHNPMGQLASVPTLPWWSA--LGSQSVCGESCGQFKTLLMEHPSSG 60

Query: 61  KEFAATKQATHG----LEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
            +  +TKQA       L K N   F+I+PGD KNS D  K   V SLQS  SE+H RFEL
Sbjct: 61  DQLTSTKQAGRATEQQLNKANPTQFTIFPGDCKNSGDGHKPQAVISLQSAPSEHHARFEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQ 180
           GF QP+ C  YPYM+Q YG+ S YGPQI GRVMLP+ + T+D PIYVNAKQY+GIIRRRQ
Sbjct: 121 GFRQPMVCAKYPYMDQCYGVFSTYGPQISGRVMLPLNVATEDGPIYVNAKQYNGIIRRRQ 180

Query: 181 IRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVN 240
            RAKA+++N+  + RKPY+H SRHLHAMRRPRG GGRFLN K   + K  +   K  +  
Sbjct: 181 SRAKAVLENKVTKARKPYMHYSRHLHAMRRPRGCGGRFLNTKCSNSGKDGIKMNKAAEGK 240

Query: 241 LSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRG-LQRFQINHIGPSM 300
           L     SQ SEVLQS+SGTLNS  EA  G G  L  SEV+S++SRG L+ F INH+G S+
Sbjct: 241 LWHYAVSQNSEVLQSDSGTLNSSKEA-NGGGSTLSGSEVTSVYSRGDLEHFPINHLGLSV 300

Query: 301 QSLAEIIDGGGHGMVLP-KWVAAADNCCDL 321
            +L  ++D  G G V+P KWVA  DNCC+L
Sbjct: 301 HTLPRMVD-NGRGTVMPSKWVATGDNCCNL 326

[Close]

BLAST of Carg16222-RA vs. TrEMBL
Match: tr|A0A2P4HYA2|A0A2P4HYA2_QUESU (Nuclear transcription factor y subunit a-10 OS=Quercus suber OX=58331 GN=CFP56_61491 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 185/330 (56.06%), Postives = 219/330 (66.36%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGD-FGQVKE---QLDSNG 60
           MA Q  Y KEHEGIV NS+GQ+ SS    W  +F   S S +G+  GQ+K     L   G
Sbjct: 1   MATQAVYFKEHEGIVHNSMGQVPSS----WWGSF--ASKSGYGESCGQLKSFSTDLPIGG 60

Query: 61  KEFAATKQA----THGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
            +  ATKQA     HG E+ NT  F+I+  + K+S D QK     SLQS LSEY  RFEL
Sbjct: 61  DQLIATKQAGRGTEHGEERGNTTQFTIFSDNCKSSGDGQKPQATISLQSSLSEYRGRFEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVM-LPMRLTTDDEPIYVNAKQYHGIIRRR 180
           GF QP+    YPY++Q YG+    GPQI GRVM LPM + T+D PIYVNAKQYHGIIRRR
Sbjct: 121 GFSQPMIYAKYPYVDQRYGVFPNCGPQISGRVMLLPMNMATNDGPIYVNAKQYHGIIRRR 180

Query: 181 QIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDV 240
           Q RAK +M+N+  R RK Y+HESRHLHAMRRPRG GGRFLN KN   EKS     K  D 
Sbjct: 181 QSRAKGVMENKLTRARKSYMHESRHLHAMRRPRGCGGRFLNTKNTNKEKSGTEVIKTGDG 240

Query: 241 NLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRG-LQRFQINHIGPS 300
            LS  TGSQ SE  QS+SGT NS  +AK G G N+  SE++SMFSRG L RFQINH+ P 
Sbjct: 241 QLSQGTGSQSSEAFQSDSGTFNSSKDAK-GSGSNI--SEITSMFSRGDLDRFQINHLIPP 300

Query: 301 MQSLAEIIDGGGHGMVLPKWVAAADNCCDL 321
              LA++I+ GG G+V+PKWV A DNCC+L
Sbjct: 301 AHPLADLIE-GGRGLVMPKWVTAPDNCCNL 320

[Close]

BLAST of Carg16222-RA vs. TrEMBL
Match: tr|A0A2P5AU49|A0A2P5AU49_9ROSA (Nuclear transcription factor Y subunit A OS=Trema orientalis OX=63057 GN=TorNFYA1 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 182/329 (55.32%), Postives = 223/329 (67.78%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGD-FGQVKE---QLDSNG 60
           MA QT Y KEHEG+VPN++GQLSS P+  W +AF  G+ S+FGD  GQ+K    +    G
Sbjct: 1   MAMQTIYFKEHEGLVPNTIGQLSSIPSGPWWSAF--GTQSVFGDSCGQLKPLSMEQPGTG 60

Query: 61  KEFAATKQATHGL----EKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
            +  +TK A  G     +K NT  F+I+PGD K S D QK     SLQS L EY  R EL
Sbjct: 61  DQLISTKHAGRGTDLGPDKGNTTQFTIFPGDYKFSGDGQKTQATISLQSSLPEYRARLEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQ 180
           GFGQP+ C  YPY++Q  G+LS YG QI GR+MLP+ LT DD PIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPMVCAKYPYIDQFCGLLS-YGHQISGRIMLPLNLTADDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRAK-AMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSS--MVPKKVD 240
            RAK A+++N+  + RKPY+HESRHLHAMRRPRG GGRFLN KN  N+K     V K  +
Sbjct: 181 SRAKAAVLENKIPKVRKPYMHESRHLHAMRRPRGCGGRFLNTKNLNNDKGGGPEVKKLGN 240

Query: 241 DVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRG-LQRFQINHIG 300
              L   + SQ SEVLQSESGTLNS  EA    G N+  SEV+SM+SRG L  FQIN + 
Sbjct: 241 GHQLFRPSRSQSSEVLQSESGTLNSSKEANNSSGSNISGSEVTSMYSRGDLDHFQINPLA 300

Query: 301 PSMQSLAEIIDGGGHGMVLP-KWVAAADN 317
            S  SL+++++    GMV+P KW+AAAD+
Sbjct: 301 SSFHSLSDMME-NSRGMVMPTKWIAAADH 325

The following BLAST results are available for this feature:

BLAST of Carg16222-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539687.1	1.4e-182	99.07	nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022956068.1	3.4e-181	98.14	nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]	[more]
XP_023005692.1	4.8e-175	96.27	nuclear transcription factor Y subunit A-10-like [Cucurbita maxima]	[more]
XP_022151376.1	2.4e-150	84.50	nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377....	[more]
XP_008442935.1	4.5e-149	83.74	PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo] >XP_008442...	[more]

BLAST of Carg16222-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05690.1	3.4e-42	41.67	nuclear factor Y, subunit A2	[more]
AT5G06510.1	5.9e-42	44.44	nuclear factor Y, subunit A10	[more]
AT2G34720.1	1.4e-22	46.22	nuclear factor Y, subunit A4	[more]
AT1G72830.2	2.3e-22	47.62	nuclear factor Y, subunit A3	[more]
AT1G30500.2	2.6e-21	50.00	nuclear factor Y, subunit A7	[more]

BLAST of Carg16222-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9X4\|NFYA2_ARATH	6.2e-41	41.67	Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q8LFU0\|NFYAA_ARATH	1.1e-40	44.44	Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
sp\|Q93ZH2\|NFYA3_ARATH	1.7e-22	48.00	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q8VY64\|NFYA4_ARATH	2.5e-21	46.22	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q9LVJ7\|NFYA6_ARATH	4.6e-20	50.00	Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Carg16222-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7N7\|A0A1S3B7N7_CUCME	3.0e-149	83.74	nuclear transcription factor Y subunit A-10 OS=Cucumis melo OX=3656 GN=LOC103486...	[more]
tr\|A0A0A0LE75\|A0A0A0LE75_CUCSA	4.3e-148	83.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782710 PE=4 SV=1	[more]
tr\|A0A061EVQ6\|A0A061EVQ6_THECC	8.9e-85	55.45	Nuclear transcription factor Y subunit A-10, putative OS=Theobroma cacao OX=3641...	[more]
tr\|A0A2P4HYA2\|A0A2P4HYA2_QUESU	2.9e-83	56.06	Nuclear transcription factor y subunit a-10 OS=Quercus suber OX=58331 GN=CFP56_6...	[more]
tr\|A0A2P5AU49\|A0A2P5AU49_9ROSA	1.2e-81	55.32	Nuclear transcription factor Y subunit A OS=Trema orientalis OX=63057 GN=TorNFYA...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001289	NFYA

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg16222	Carg16222	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg16222-RA	Carg16222-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16222-RA.CDS.5	Carg16222-RA.CDS.5	CDS
Carg16222-RA.CDS.4	Carg16222-RA.CDS.4	CDS
Carg16222-RA.CDS.3	Carg16222-RA.CDS.3	CDS
Carg16222-RA.CDS.2	Carg16222-RA.CDS.2	CDS
Carg16222-RA.CDS.1	Carg16222-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16222-RA.exon.5	Carg16222-RA.exon.5	exon
Carg16222-RA.exon.4	Carg16222-RA.exon.4	exon
Carg16222-RA.exon.3	Carg16222-RA.exon.3	exon
Carg16222-RA.exon.2	Carg16222-RA.exon.2	exon
Carg16222-RA.exon.1	Carg16222-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 187..210 score: 79.86 coord: 156..178 score: 68.84
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 152..213 e-value: 4.6E-32 score: 122.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 155..210 e-value: 8.9E-25 score: 87.0
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 5..317
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 153..213 score: 33.961
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..224
None	No IPR available	PANTHER	PTHR12632:SF7	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-10-RELATED	coord: 5..317