Carg16222 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16222
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	nuclear transcription factor Y subunit A-10
Location	Cucurbita_argyrosperma_scaffold_077 : 122414 .. 125243 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTAACTTTTTGTTCATTCGGTTCATTTTCATTTCCATGATCATATTTAAGCTTGCCAAAAAGCATGAAAATAATTAAGAGTTGCTTATAAATGGTGGATTTACAAATTTTCGAGTGACTCAATATCACAAGCATATCTCTAGGCTACTCAAAAGTCGATTAAGAGGTGGCTAGGGAATGGTTTATTCAAAACGAATAGCATAGGTAGGTTGAGGAAGAAGCTGGATACTTCTAATCTGACATGTAGCAAACATATGCTCTGAGGTACTACTATTCAAAATGCGATAGGCCATGGATAACAAATGTTTGTAAGAGGAAACAAGTTAGGGGAGGAGGGACCTAGATTGTTTGTGCTGATGAGCTCGACTTATAGCTTAGTAACGTGACATTAGGGGACTGGAGAAGTCGAGAGGGAAAGTGTATCAGGATGGTATGCTTTCAGTGTTTTGAGTTTGCTTAGGCTGGGAGGGTAGGGAGCTCTTTGAACATCTCCAAGCTTGTGGCCTCATTGTGGATAATGGATATTAAGCTCTATTCAAGACTAACCACTAATAAGTTTCCAACTTCAATATGGGCTTTACTACTACTGAAATAACATGCATCCCAGGTCACCATATAGACTTGACATTAGAGTGCAATCTTCTTGAGCAATTTATGTCCCAATCATCTACTGTTGAAGTACACCCTGTGCAACACAGAAGCCGCACTGCCGGTTGACCCTCTACCCGATGGCAACTATCCCTTTTCTTTTTATGCTTAACTACGAACCTTTGTTCTACTTAATGGGGTACATATACAACCCTCAGACCTAATGGTTAGGTTCGACAGAAGTTCGTGCCGCTTATCCCGGCTACAATATGCTTTTCTTTTGTGTATTTAGTCTTAAAACTGGATCTCCCATTTTCCTCAACTAATATTTCTACCATCCCTTCTTCAGAATATTATTTTCTAGCTAATACTTCATCAAGGATTTAGCTAAAATCTCAATGTTTATGAAACAAGAGGGAAAGAAAGTAGCATGAAACTCAAGGAAGACTATTACCTTTTTCTCTTTTTGTGCTGGCTGAGTTAAAATGTCGAACATAATGGTGAGCTTGTTATCCGATGAGAAAACTCCTCTTGAAACATCCATGCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGGTAGGATCTAAAATGTTAATTGAATTTCCCCCCTAAAACAGTGCTTTATACATATATATGTTACTAATTATGAAGACGAAAATTGTAGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGTATGTTTCCTTCCATTCTTCAACCACTTCCTTTTTACCTTCTTTTTTCCTTGTATGTATTCAATGTGAATTGTATTATATTCATAGATATTTTCCAACAAAAAAAAAAGTTAGATAGGTGCATAAGCAGAGCTAAGTATGCAAAAAAAATAAAAATGGTGAGTGGAAAACAATACAATATAGCCAAAAACCAGAAATGGTGCGAAGGAGATGACACATTTAGGCCTCCTAGATGAATGCTGCCAAAAAAGTTAATAGGAAACACAACTCAGGGTTTCATGTAATGAAGTATGGTAGAGAAGTAATTTTCTTTGAACAATATATTTGTTGATTGGGTTCTGCTATTCATTGTAAGCTATCTGGAAAAGGTCAGTCTGCCTAATCTATGAGCAAAAACTTAACCATTTGCAATAATTAGGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGGTATGTAAGTATAAGTCTTACAGAGGCGTCTGTCCTAGCTTTTGGACACTTTAATATGATATAGTATCCAGCATCATGTTCATTCTGTTGTCTGAACGAACTGTTATTGTGATTTATATGCCTCTGATTGTATCCTTCAGTCCAAATACTTTTCTTTTTCCTGTGCAGAACTAGTATCCACATTATTCCTGCTGATATAGATTGCATATCTGTCTTACAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

mRNA sequence

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

Coding sequence (CDS)

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

Protein sequence

MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLPKWVAAADNCCDLCF

Homology

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BLAST of Carg16222 vs. NCBI nr
Match: XP_023539687.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 648.3 bits (1671), Expect = 1.4e-182
Identity = 319/322 (99.07%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQSPLSEYHNRFELGFGQPL C
Sbjct: 61  ATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNRFELGFGQPLIC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 322

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BLAST of Carg16222 vs. NCBI nr
Match: XP_022956068.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita moschata])

HSP 1 Score: 643.7 bits (1659), Expect = 3.4e-181
Identity = 316/322 (98.14%), Postives = 318/322 (98.76%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQSPLSEYHN FELGF QPLTC
Sbjct: 61  ATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFSQPLTC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 322

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BLAST of Carg16222 vs. NCBI nr
Match: XP_023005692.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita maxima])

HSP 1 Score: 623.2 bits (1606), Expect = 4.8e-175
Identity = 310/322 (96.27%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQ  HGLEKLNTAPFSIYPGDTKNSV AQK SPVFS    LSEYHN FELGFGQPL C
Sbjct: 61  ATKQTGHGLEKLNTAPFSIYPGDTKNSVGAQKPSPVFS----LSEYHNHFELGFGQPLIC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQ FQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQCFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAA+NCCDLCF
Sbjct: 301 GGHGMVLPKWVAAAENCCDLCF 318

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BLAST of Carg16222 vs. NCBI nr
Match: XP_022151376.1 (nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377.1 nuclear transcription factor Y subunit A-10 [Momordica charantia])

HSP 1 Score: 541.2 bits (1393), Expect = 2.4e-150
Identity = 278/329 (84.50%), Postives = 290/329 (88.15%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNG 60
           MAPQTGYLKEHEGIVPNSLGQLSSSP RLWS AFG GS +IFGDFGQ+K    EQL SNG
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWS-AFGQGSQTIFGDFGQLKASSIEQLGSNG 60

Query: 61  KEFAATKQAT----HGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
           KEF   KQA     HGLEK+NTAPFSIYPGD KNSVDAQK SPVFSLQSPLSEYH RFEL
Sbjct: 61  KEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQ 180
           GFGQP+ C NYPYMEQHYGILSAYGPQIPGRVMLPM LTTDD PIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVN 240
           IRAKAMM+NR ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  + K S+  KKVD+VN
Sbjct: 181 IRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN 240

Query: 241 LSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQ 300
           LS+ TGSQCS VLQSESGTLNS NEAK GRGFNL SSEV SMFSRGLQRFQI+H+ PSMQ
Sbjct: 241 LSESTGSQCSVVLQSESGTLNSPNEAK-GRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLC 322
           SLAEIIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLC 327

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BLAST of Carg16222 vs. NCBI nr
Match: XP_008442935.1 (PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo] >XP_008442936.1 PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo])

HSP 1 Score: 537.0 bits (1382), Expect = 4.5e-149
Identity = 273/326 (83.74%), Postives = 290/326 (88.96%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNG 60
           MAPQTG LKEHE I+PNSLGQLS SP RLWS AFG G  SIFGDFGQVK    +QL SNG
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWS-AFGQGPQSIFGDFGQVKASSIQQLGSNG 60

Query: 61  KEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG 120
           KEF  TKQ  +HGL+KLNTAPFSIYPGD K S+DAQK SPVFSLQSPL+EYHNRFELGFG
Sbjct: 61  KEFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFG 120

Query: 121 QPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRA 180
           QPL C NYPYMEQHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRA
Sbjct: 121 QPLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRA 180

Query: 181 KAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSD 240
           KAMM+N+ ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD
Sbjct: 181 KAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSD 240

Query: 241 LTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA 300
            TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLA
Sbjct: 241 STGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLA 300

Query: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 322
           EIIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 324

[Close]

BLAST of Carg16222 vs. TAIR10
Match: AT3G05690.1 (nuclear factor Y, subunit A2)

HSP 1 Score: 169.5 bits (428), Expect = 3.4e-42
Identity = 135/324 (41.67%), Postives = 170/324 (52.47%), Query Frame = 0


Query: 22  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLN 81
           L S+P   W  AFG   L   S+ GD   F  VK   +   G+     +  ATH      
Sbjct: 10  LFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATH------ 69

Query: 82  TAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYME-QHYG 141
              FS+  GD K+  +  + H   FS+QSP        ELGF QP     YPY E Q+YG
Sbjct: 70  -LAFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQYYG 129

Query: 142 ILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTR 201
           ++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R R
Sbjct: 130 VVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCR 189

Query: 202 KPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQC 261
           KPY+H SRHLHA+RRPRGSGGRFLN K+Q  E S    KK      +        + SQ 
Sbjct: 190 KPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQN 249

Query: 262 SEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG 320
           SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL      
Sbjct: 250 SEVVHPENGTMNLSN------GLNVSGSEVTSM----------NYFLSSPVHSLG----- 292

[Close]

BLAST of Carg16222 vs. TAIR10
Match: AT5G06510.1 (nuclear factor Y, subunit A10)

HSP 1 Score: 168.7 bits (426), Expect = 5.9e-42
Identity = 116/261 (44.44%), Postives = 148/261 (56.70%), Query Frame = 0


Query: 21  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTA 80
           +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T 
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSG------EASDSFTGVKAVTTEAEQGVVDKQTSTT 64

Query: 81  PFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSA 140
            F+  PG  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SA
Sbjct: 65  LFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSA 124

Query: 141 YGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHE 200
           YG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H 
Sbjct: 125 YGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHH 184

Query: 201 SRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLN 260
           SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+N
Sbjct: 185 SRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETIN 235

Query: 261 SQNEAKEGRGFNLLSSEVSSM 275
           S  EA E    NL  S V+SM
Sbjct: 245 SSREANES---NLSDSAVTSM 235

[Close]

BLAST of Carg16222 vs. TAIR10
Match: AT2G34720.1 (nuclear factor Y, subunit A4)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 0


Query: 114 FGQPLTCENYPYMEQHY---------------GI-LSAYGPQIPGRVMLPMRLTTDDEPI 173
           + +P+    YPY + +Y               G+ L   G Q PG   +P++    +EP+
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPG---VPLQCDAVEEPV 103

Query: 174 YVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQ 217
           +VNAKQYHGI+RRRQ RAK   +NR  + +KPY+HESRHLHA+RRPRG GGRFLN K +
Sbjct: 104 FVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKE 159

[Close]

BLAST of Carg16222 vs. TAIR10
Match: AT1G72830.2 (nuclear factor Y, subunit A3)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-22
Identity = 60/126 (47.62%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 122 NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGII 181
           ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 182 RRRQIRAKAMMKNRPARTRK-PYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKK 234
           RRRQ RAK   +N+  R RK PY+HESRH+HA++RPRGSGGRFLN K    E      ++
Sbjct: 194 RRRQQRAKLEAQNKLIRARKVPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAARE 253

[Close]

BLAST of Carg16222 vs. TAIR10
Match: AT1G30500.2 (nuclear factor Y, subunit A7)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-21
Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 123 YPYMEQHYGILSAYGPQIPGRVML----------PMRLTTDDEPIYVNAKQYHGIIRRRQ 182
           YPY + +Y  + A  PQ    V L          P+     +EP++VNAKQYHGI+RRRQ
Sbjct: 58  YPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQ 117

Query: 183 IRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQ 217
            RA+   +N+  ++RKPY+HESRHLHA+RRPRG GGRFLN K +
Sbjct: 118 SRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKE 161

[Close]

BLAST of Carg16222 vs. Swiss-Prot
Match: sp|Q9M9X4|NFYA2_ARATH (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-41
Identity = 135/324 (41.67%), Postives = 170/324 (52.47%), Query Frame = 0


Query: 22  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLN 81
           L S+P   W  AFG   L   S+ GD   F  VK   +   G+     +  ATH      
Sbjct: 10  LFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATH------ 69

Query: 82  TAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYME-QHYG 141
              FS+  GD K+  +  + H   FS+QSP        ELGF QP     YPY E Q+YG
Sbjct: 70  -LAFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQYYG 129

Query: 142 ILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTR 201
           ++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R R
Sbjct: 130 VVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCR 189

Query: 202 KPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQC 261
           KPY+H SRHLHA+RRPRGSGGRFLN K+Q  E S    KK      +        + SQ 
Sbjct: 190 KPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQN 249

Query: 262 SEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG 320
           SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL      
Sbjct: 250 SEVVHPENGTMNLSN------GLNVSGSEVTSM----------NYFLSSPVHSLG----- 292

[Close]

BLAST of Carg16222 vs. Swiss-Prot
Match: sp|Q8LFU0|NFYAA_ARATH (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=NFYA10 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 116/261 (44.44%), Postives = 148/261 (56.70%), Query Frame = 0


Query: 21  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTA 80
           +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T 
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSG------EASDSFTGVKAVTTEAEQGVVDKQTSTT 64

Query: 81  PFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSA 140
            F+  PG  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SA
Sbjct: 65  LFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSA 124

Query: 141 YGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHE 200
           YG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H 
Sbjct: 125 YGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHH 184

Query: 201 SRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLN 260
           SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+N
Sbjct: 185 SRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETIN 235

Query: 261 SQNEAKEGRGFNLLSSEVSSM 275
           S  EA E    NL  S V+SM
Sbjct: 245 SSREANES---NLSDSAVTSM 235

[Close]

BLAST of Carg16222 vs. Swiss-Prot
Match: sp|Q93ZH2|NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-22
Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 122 NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGII 181
           ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 182 RRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKV 234
           RRRQ RAK   +N+  R RKPY+HESRH+HA++RPRGSGGRFLN K    E      ++ 
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQ 253

[Close]

BLAST of Carg16222 vs. Swiss-Prot
Match: sp|Q8VY64|NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.5e-21
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 0


Query: 114 FGQPLTCENYPYMEQHY---------------GI-LSAYGPQIPGRVMLPMRLTTDDEPI 173
           + +P+    YPY + +Y               G+ L   G Q PG   +P++    +EP+
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPG---VPLQCDAVEEPV 103

Query: 174 YVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQ 217
           +VNAKQYHGI+RRRQ RAK   +NR  + +KPY+HESRHLHA+RRPRG GGRFLN K +
Sbjct: 104 FVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKE 159

[Close]

BLAST of Carg16222 vs. Swiss-Prot
Match: sp|Q9LVJ7|NFYA6_ARATH (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.6e-20
Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 122 NYPYMEQHYGILSAYGPQI----PGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKA 181
           ++PY  QH    +   PQI    P R+ LP  +  ++EPI+VNAKQY  I+RRR+ RAK 
Sbjct: 139 SFPYASQH----TVQHPQIRGLVPSRMPLPHNI-PENEPIFVNAKQYQAILRRRERRAKL 198

Query: 182 MMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVP 226
             +N+  + RKPY+HESRHLHA++R RGSGGRFLN K      SS+ P
Sbjct: 199 EAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSP 241

[Close]

BLAST of Carg16222 vs. TrEMBL
Match: tr|A0A1S3B7N7|A0A1S3B7N7_CUCME (nuclear transcription factor Y subunit A-10 OS=Cucumis melo OX=3656 GN=LOC103486690 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 3.0e-149
Identity = 273/326 (83.74%), Postives = 290/326 (88.96%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNG 60
           MAPQTG LKEHE I+PNSLGQLS SP RLWS AFG G  SIFGDFGQVK    +QL SNG
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWS-AFGQGPQSIFGDFGQVKASSIQQLGSNG 60

Query: 61  KEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG 120
           KEF  TKQ  +HGL+KLNTAPFSIYPGD K S+DAQK SPVFSLQSPL+EYHNRFELGFG
Sbjct: 61  KEFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFG 120

Query: 121 QPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRA 180
           QPL C NYPYMEQHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRA
Sbjct: 121 QPLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRA 180

Query: 181 KAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSD 240
           KAMM+N+ ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD
Sbjct: 181 KAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSD 240

Query: 241 LTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA 300
            TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLA
Sbjct: 241 STGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLA 300

Query: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 322
           EIIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 324

[Close]

BLAST of Carg16222 vs. TrEMBL
Match: tr|A0A0A0LE75|A0A0A0LE75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782710 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 4.3e-148
Identity = 271/325 (83.38%), Postives = 288/325 (88.62%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKE---QLDSNGK 60
           MAPQTG LKEHE I+PNSLGQLS +P RLWS A G GS SIFGDFGQVK    QL SNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWS-ALGQGSQSIFGDFGQVKASSIQLGSNGK 60

Query: 61  EFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQ 120
           EF  TKQ   HGL+KLNTAPFSIYPGD K S+DAQK SPVFSLQSPL+EYHNRFELGFGQ
Sbjct: 61  EFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAK 180
           PL C NYPYM+QHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDL 240
           AMM+N+ ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD 
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAE 300
           TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLAE
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAE 300

Query: 301 IIDGGGHGMVLPKWVAAADNCCDLC 322
           IIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 IIDGGGHGMVLPKWVAAADNCCDLC 323

[Close]

BLAST of Carg16222 vs. TrEMBL
Match: tr|A0A061EVQ6|A0A061EVQ6_THECC (Nuclear transcription factor Y subunit A-10, putative OS=Theobroma cacao OX=3641 GN=TCM_022984 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.9e-85
Identity = 183/330 (55.45%), Postives = 223/330 (67.58%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGD-FGQVKEQL---DSNG 60
           MA QT YLKEH+GIV N +GQL+S PT  W +A  LGS S+ G+  GQ K  L    S+G
Sbjct: 1   MAMQTLYLKEHDGIVHNPMGQLASVPTLPWWSA--LGSQSVCGESCGQFKTLLMEHPSSG 60

Query: 61  KEFAATKQATHG----LEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
            +  +TKQA       L K N   F+I+PGD KNS D  K   V SLQS  SE+H RFEL
Sbjct: 61  DQLTSTKQAGRATEQQLNKANPTQFTIFPGDCKNSGDGHKPQAVISLQSAPSEHHARFEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQ 180
           GF QP+ C  YPYM+Q YG+ S YGPQI GRVMLP+ + T+D PIYVNAKQY+GIIRRRQ
Sbjct: 121 GFRQPMVCAKYPYMDQCYGVFSTYGPQISGRVMLPLNVATEDGPIYVNAKQYNGIIRRRQ 180

Query: 181 IRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVN 240
            RAKA+++N+  + RKPY+H SRHLHAMRRPRG GGRFLN K   + K  +   K  +  
Sbjct: 181 SRAKAVLENKVTKARKPYMHYSRHLHAMRRPRGCGGRFLNTKCSNSGKDGIKMNKAAEGK 240

Query: 241 LSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRG-LQRFQINHIGPSM 300
           L     SQ SEVLQS+SGTLNS  EA  G G  L  SEV+S++SRG L+ F INH+G S+
Sbjct: 241 LWHYAVSQNSEVLQSDSGTLNSSKEA-NGGGSTLSGSEVTSVYSRGDLEHFPINHLGLSV 300

Query: 301 QSLAEIIDGGGHGMVLP-KWVAAADNCCDL 321
            +L  ++D  G G V+P KWVA  DNCC+L
Sbjct: 301 HTLPRMVD-NGRGTVMPSKWVATGDNCCNL 326

[Close]

BLAST of Carg16222 vs. TrEMBL
Match: tr|A0A2P4HYA2|A0A2P4HYA2_QUESU (Nuclear transcription factor y subunit a-10 OS=Quercus suber OX=58331 GN=CFP56_61491 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 185/330 (56.06%), Postives = 219/330 (66.36%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGD-FGQVKE---QLDSNG 60
           MA Q  Y KEHEGIV NS+GQ+ SS    W  +F   S S +G+  GQ+K     L   G
Sbjct: 1   MATQAVYFKEHEGIVHNSMGQVPSS----WWGSF--ASKSGYGESCGQLKSFSTDLPIGG 60

Query: 61  KEFAATKQA----THGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
            +  ATKQA     HG E+ NT  F+I+  + K+S D QK     SLQS LSEY  RFEL
Sbjct: 61  DQLIATKQAGRGTEHGEERGNTTQFTIFSDNCKSSGDGQKPQATISLQSSLSEYRGRFEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVM-LPMRLTTDDEPIYVNAKQYHGIIRRR 180
           GF QP+    YPY++Q YG+    GPQI GRVM LPM + T+D PIYVNAKQYHGIIRRR
Sbjct: 121 GFSQPMIYAKYPYVDQRYGVFPNCGPQISGRVMLLPMNMATNDGPIYVNAKQYHGIIRRR 180

Query: 181 QIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDV 240
           Q RAK +M+N+  R RK Y+HESRHLHAMRRPRG GGRFLN KN   EKS     K  D 
Sbjct: 181 QSRAKGVMENKLTRARKSYMHESRHLHAMRRPRGCGGRFLNTKNTNKEKSGTEVIKTGDG 240

Query: 241 NLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRG-LQRFQINHIGPS 300
            LS  TGSQ SE  QS+SGT NS  +AK G G N+  SE++SMFSRG L RFQINH+ P 
Sbjct: 241 QLSQGTGSQSSEAFQSDSGTFNSSKDAK-GSGSNI--SEITSMFSRGDLDRFQINHLIPP 300

Query: 301 MQSLAEIIDGGGHGMVLPKWVAAADNCCDL 321
              LA++I+ GG G+V+PKWV A DNCC+L
Sbjct: 301 AHPLADLIE-GGRGLVMPKWVTAPDNCCNL 320

[Close]

BLAST of Carg16222 vs. TrEMBL
Match: tr|A0A2P5AU49|A0A2P5AU49_9ROSA (Nuclear transcription factor Y subunit A OS=Trema orientalis OX=63057 GN=TorNFYA1 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 182/329 (55.32%), Postives = 223/329 (67.78%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGD-FGQVKE---QLDSNG 60
           MA QT Y KEHEG+VPN++GQLSS P+  W +AF  G+ S+FGD  GQ+K    +    G
Sbjct: 1   MAMQTIYFKEHEGLVPNTIGQLSSIPSGPWWSAF--GTQSVFGDSCGQLKPLSMEQPGTG 60

Query: 61  KEFAATKQATHGL----EKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
            +  +TK A  G     +K NT  F+I+PGD K S D QK     SLQS L EY  R EL
Sbjct: 61  DQLISTKHAGRGTDLGPDKGNTTQFTIFPGDYKFSGDGQKTQATISLQSSLPEYRARLEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQ 180
           GFGQP+ C  YPY++Q  G+LS YG QI GR+MLP+ LT DD PIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPMVCAKYPYIDQFCGLLS-YGHQISGRIMLPLNLTADDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRAK-AMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSS--MVPKKVD 240
            RAK A+++N+  + RKPY+HESRHLHAMRRPRG GGRFLN KN  N+K     V K  +
Sbjct: 181 SRAKAAVLENKIPKVRKPYMHESRHLHAMRRPRGCGGRFLNTKNLNNDKGGGPEVKKLGN 240

Query: 241 DVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRG-LQRFQINHIG 300
              L   + SQ SEVLQSESGTLNS  EA    G N+  SEV+SM+SRG L  FQIN + 
Sbjct: 241 GHQLFRPSRSQSSEVLQSESGTLNSSKEANNSSGSNISGSEVTSMYSRGDLDHFQINPLA 300

Query: 301 PSMQSLAEIIDGGGHGMVLP-KWVAAADN 317
            S  SL+++++    GMV+P KW+AAAD+
Sbjct: 301 SSFHSLSDMME-NSRGMVMPTKWIAAADH 325

The following BLAST results are available for this feature:

BLAST of Carg16222 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539687.1	1.4e-182	99.07	nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022956068.1	3.4e-181	98.14	nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]	[more]
XP_023005692.1	4.8e-175	96.27	nuclear transcription factor Y subunit A-10-like [Cucurbita maxima]	[more]
XP_022151376.1	2.4e-150	84.50	nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377....	[more]
XP_008442935.1	4.5e-149	83.74	PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo] >XP_008442...	[more]

BLAST of Carg16222 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05690.1	3.4e-42	41.67	nuclear factor Y, subunit A2	[more]
AT5G06510.1	5.9e-42	44.44	nuclear factor Y, subunit A10	[more]
AT2G34720.1	1.4e-22	46.22	nuclear factor Y, subunit A4	[more]
AT1G72830.2	2.3e-22	47.62	nuclear factor Y, subunit A3	[more]
AT1G30500.2	2.6e-21	50.00	nuclear factor Y, subunit A7	[more]

BLAST of Carg16222 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9X4\|NFYA2_ARATH	6.2e-41	41.67	Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q8LFU0\|NFYAA_ARATH	1.1e-40	44.44	Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
sp\|Q93ZH2\|NFYA3_ARATH	1.7e-22	48.00	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q8VY64\|NFYA4_ARATH	2.5e-21	46.22	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q9LVJ7\|NFYA6_ARATH	4.6e-20	50.00	Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Carg16222 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7N7\|A0A1S3B7N7_CUCME	3.0e-149	83.74	nuclear transcription factor Y subunit A-10 OS=Cucumis melo OX=3656 GN=LOC103486...	[more]
tr\|A0A0A0LE75\|A0A0A0LE75_CUCSA	4.3e-148	83.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782710 PE=4 SV=1	[more]
tr\|A0A061EVQ6\|A0A061EVQ6_THECC	8.9e-85	55.45	Nuclear transcription factor Y subunit A-10, putative OS=Theobroma cacao OX=3641...	[more]
tr\|A0A2P4HYA2\|A0A2P4HYA2_QUESU	2.9e-83	56.06	Nuclear transcription factor y subunit a-10 OS=Quercus suber OX=58331 GN=CFP56_6...	[more]
tr\|A0A2P5AU49\|A0A2P5AU49_9ROSA	1.2e-81	55.32	Nuclear transcription factor Y subunit A OS=Trema orientalis OX=63057 GN=TorNFYA...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001289	NFYA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16222-RA	Carg16222-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 187..210 score: 79.86 coord: 156..178 score: 68.84
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 152..213 e-value: 4.6E-32 score: 122.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 155..210 e-value: 8.9E-25 score: 87.0
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 5..317
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 153..213 score: 33.961
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..224
None	No IPR available	PANTHER	PTHR12632:SF7	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-10-RELATED	coord: 5..317

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16222	Cla017612	Watermelon (97103) v1	carwmB0677
Carg16222	Csa3G782710	Cucumber (Chinese Long) v2	carcuB0700
Carg16222	MELO3C009551	Melon (DHL92) v3.5.1	carmeB0679
Carg16222	ClCG10G018210	Watermelon (Charleston Gray)	carwcgB0656
Carg16222	CSPI03G35740	Wild cucumber (PI 183967)	carcpiB0712
Carg16222	Cucsa.241980	Cucumber (Gy14) v1	carcgyB0758
Carg16222	CmaCh06G005310	Cucurbita maxima (Rimu)	carcmaB0957
Carg16222	CmaCh14G003670	Cucurbita maxima (Rimu)	carcmaB0955
Carg16222	CmoCh06G005330	Cucurbita moschata (Rifu)	carcmoB0933
Carg16222	CmoCh14G003650	Cucurbita moschata (Rifu)	carcmoB0931
Carg16222	Lsi03G018090	Bottle gourd (USVL1VR-Ls)	carlsiB620
Carg16222	Cp4.1LG03g00360	Cucurbita pepo (Zucchini)	carcpeB0956
Carg16222	Cp4.1LG08g09570	Cucurbita pepo (Zucchini)	carcpeB0957
Carg16222	CsGy3G033210	Cucumber (Gy14) v2	carcgybB0676
Carg16222	MELO3C009551.2	Melon (DHL92) v3.6.1	carmedB0691
Carg16222	CsaV3_3G038100	Cucumber (Chinese Long) v3	carcucB0714
Carg16222	Cla97C10G201180	Watermelon (97103) v2	carwmbB0706
Carg16222	Bhi11G001972	Wax gourd	carwgoB0796

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16222	Carg03617	Silver-seed gourd	carcarB291

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16222	Cucumber (Gy14) v2	carcgybB0678
Carg16222	Wild cucumber (PI 183967)	carcpiB0714
Carg16222	Cucumber (Chinese Long) v2	carcuB0702
Carg16222	Cucumber (Chinese Long) v3	carcucB0716
Carg16222	Melon (DHL92) v3.5.1	carmeB0680
Carg16222	Melon (DHL92) v3.6.1	carmedB0692
Carg16222	Watermelon (97103) v2	carwmbB0707
Carg16222	Wax gourd	carwgoB0795
Carg16222	Wax gourd	carwgoB0797