Carg16190-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16190-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	eukaryotic translation initiation factor 4B3-like
Location	Cucurbita_argyrosperma_scaffold_068 : 601238 .. 603480 (-)
Sequence length	1362

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAACTGTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTGCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTCTAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACACCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGCGAAGAGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGTGAGAACGGTGGTGGGGCTCATTCTGATAACTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAGGGCCGACAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGGAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGGTTTGTATTATACTCCAAAACTCTTTTGCTGCTTTTGATGGTTAAGTAGTTGGTACATATGATTCTAGTTGTTCCCTTGTATTTGTTTGTGGCTTGTGGTGCTTTATATGTGCTCTAGGTTGTCCTTTGGATAGATTGCTTTATTTGCTGCTTTCTTCTAGGATTCATGTAGAGTTAGAGGTACTTTAGGCGAACTAAGTCCAGCCCAAGTCCACCGCTAGCAGGATATTGTCCTCGGTTTTTCCTTTTTGGGCTTTCCCCCAAGGTTTTTAAAATGCCTAGGTTAGGGCAAGGTTTCCACCCTTATAAAAAAAATGTTTCATTCCCCTCTCCAACCGATGTGGGATCCAACCATCTATCCCCTTGGAGGCCTAGCGTCCTCGTGGATACACCGTCCGGTGTCTAGCTCTGATATCATTTGTAATAGCCCCAAGCTCACCGCTAGCAGATAGTATCGTCTTTGGACTTTCTCTTTAAGGGCTTCCCCTCAAGGTTTTAAAATGCGTCTACTAGGAAGAGATTTTAACTCTTATGCTAAATGTTTCGTCATTCCCTTCTCTAACCAATGTGGGATCTCACGAAGACGGTTCTTTTTTCTCTCGTGGTAAGTATGGTTTGAAAGACACCTATGGAAAGTTGAATTCTGCGTAAATGATAGTTTTTGGTGGCTTTTTGTTATCTTTTGAATCAGAATAGACACAAAAAAAAAAAAAAAAAAAAAAAGAACTGTTCATGTGACTTGCTTTCCAAGGATGCTCGTTCTCTCCATTAAGACTTGCTCGATCTTGAACTAGAAGTAATTTGTAGAACTCTCAGCCAGTTTAGCTTAAATGTGATGTAGAGGAGGATGTTTGATTCAGTGACTTGATTCGGTGTTGCAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAACTGAAGAGGGTATTCTTTCTATGCAGTTGAAATAATTGAGTTTGCTGATATGATATGGTATGATATTCATTATTCAAAGTTCTTGAACTGTTCATGTGTTCTTCCT

mRNA sequence

ATGGCGGCAACTGTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTGCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTCTAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACACCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGCGAAGAGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGTGAGAACGGTGGTGGGGCTCATTCTGATAACTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAGGGCCGACAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGGAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAACTGAAGAGGGTATTCTTTCTATGCAGTTGAAATAATTGAGTTTGCTGATATGATATGGTATGATATTCATTATTCAAAGTTCTTGAACTGTTCATGTGTTCTTCCT

Coding sequence (CDS)

ATGGCGGCAACTGTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTGCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTCTAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACACCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGCGAAGAGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGTGAGAACGGTGGTGGGGCTCATTCTGATAACTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAGGGCCGACAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGGAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAACTGA

Protein sequence

MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFERRERGGGFFDSQSSKADESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWGRKSEGPKGRIGENGGGAHSDNWGRKFEGARGGFGENGGGADSDNWGKKSEGVRGGIGERPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGEN

Homology

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BLAST of Carg16190-RA vs. NCBI nr
Match: XP_022944463.1 (eukaryotic translation initiation factor 4B3-like [Cucurbita moschata])

HSP 1 Score: 619.4 bits (1596), Expect = 9.0e-174
Identity = 387/421 (91.92%), Postives = 387/421 (91.92%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60
           MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60

Query: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120
           LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY
Sbjct: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120

Query: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFER--RERG 180
           DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFER  RERG
Sbjct: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFERRERERG 180

Query: 181 GGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPSNGGGADSDNWGR 240
           GGFFDS                                ERERRGGFPSNGGGADSDNWGR
Sbjct: 181 GGFFDSQSSKADESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWGR 240

Query: 241 KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPR 300
           KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPR
Sbjct: 241 KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPR 300

Query: 301 LNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIK 360
           LNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIK
Sbjct: 301 LNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIK 360

Query: 361 DTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGE 420
           DTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGE
Sbjct: 361 DTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGE 420

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BLAST of Carg16190-RA vs. NCBI nr
Match: XP_023512685.1 (eukaryotic translation initiation factor 4B3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.5 bits (1521), Expect = 4.5e-165
Identity = 379/422 (89.81%), Postives = 382/422 (90.52%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60
           MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60

Query: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120
           LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY
Sbjct: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120

Query: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFER---RER 180
           DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKP+MGNGFER      
Sbjct: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPIMGNGFERXXXXXX 180

Query: 181 GGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPSNGGGADSDNWG 240
                  XXXXX                           ERERRGGFPSNGGGADSDNWG
Sbjct: 181 XXXXXXXXXXXXDESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWG 240

Query: 241 RKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
           RKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP
Sbjct: 241 RKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300

Query: 301 RLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKI 360
           RLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKI
Sbjct: 301 RLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKI 360

Query: 361 KDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGG 420
           KDTVE+A+RFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGG
Sbjct: 361 KDTVEKAERFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGG 420

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BLAST of Carg16190-RA vs. NCBI nr
Match: XP_022985732.1 (eukaryotic translation initiation factor 4B3-like [Cucurbita maxima])

HSP 1 Score: 590.1 bits (1520), Expect = 5.9e-165
Identity = 379/423 (89.60%), Postives = 382/423 (90.31%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60
           MAAT+SPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP
Sbjct: 1   MAATLSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60

Query: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120
           LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY
Sbjct: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120

Query: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFER----RE 180
           DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKP+MGNGFER      
Sbjct: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPIMGNGFERXXXXXX 180

Query: 181 RGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPSNGGGADSDNW 240
                   XXXXX                           ERERRGGFPSNGGGADSDNW
Sbjct: 181 XXXXXXXXXXXXXDESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNW 240

Query: 241 GRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           GRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 PRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTK 360
           PRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTK
Sbjct: 301 PRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTK 360

Query: 361 IKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAG 420
           IKDTVERA+RFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAG
Sbjct: 361 IKDTVERAERFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAG 420

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BLAST of Carg16190-RA vs. NCBI nr
Match: XP_004147022.1 (PREDICTED: eukaryotic translation initiation factor 4B-like [Cucumis sativus] >KGN61903.1 hypothetical protein Csa_2G263980 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 8.3e-135
Identity = 315/434 (72.58%), Postives = 332/434 (76.50%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKD---QSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLKD   QSR + EPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  KPS +S++P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           ++GNGFERRE        XX                              +RERRGGFP+
Sbjct: 181 MVGNGFERRE--XXXXXXXXDSHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRK +G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKPDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFER-KGFGARSGRSPDDRSGPGRSWRKPESVQSRP 420
           KIDEQLES KIKDTVERA+  SGASFER KGFGARSGRSPD     GR+WRKPESV+SRP
Sbjct: 361 KIDEQLESVKIKDTVERAETSSGASFERKKGFGARSGRSPDS----GRTWRKPESVESRP 405

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BLAST of Carg16190-RA vs. NCBI nr
Match: ADN34011.1 (translation initiation factor [Cucumis melo subsp. melo])

HSP 1 Score: 481.5 bits (1238), Expect = 2.9e-132
Identity = 314/434 (72.35%), Postives = 329/434 (75.81%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLK---DQSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLK   DQSR +SEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  +P+ +S +P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           +MGNGFER          XXXX                            +RERRGGFP+
Sbjct: 181 MMGNGFER--XXXXXXXXXXXXHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRKS+G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKSDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFE-RKGFGARSGRSPDDRSGPGRSWRKPESVQSRP 420
           KIDEQL S KIKDTVERA+  SGASFE RKGFG RSGRSPD     GRSWRKPES  SRP
Sbjct: 361 KIDEQLGSMKIKDTVERAETSSGASFERRKGFGVRSGRSPDS----GRSWRKPESADSRP 405

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BLAST of Carg16190-RA vs. TAIR10
Match: AT4G38710.2 (glycine-rich protein)

HSP 1 Score: 206.5 bits (524), Expect = 3.3e-53
Identity = 194/427 (45.43%), Postives = 237/427 (55.50%), Query Frame = 0


Query: 2   AATVSPWGKPGAWALDAEEHEEELLKDQS----RQESEPSADFPSLAAAAATKPKKKKGQ 61
           AA  S W KPGAWAL+AEEHE EL +  S    +  +E S+DFPSL            GQ
Sbjct: 3   AAVSSVWAKPGAWALEAEEHEAELKQQPSPTNQKSSAEDSSDFPSLXXXXXXXXXXXXGQ 62

Query: 62  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 121
           +I L+EF  YG +K        R LT  +L+ LPTGPR+R+ EELDR++LGGGF+S+G  
Sbjct: 63  TISLAEFATYGTAKAKPAPQTER-LTQAELVALPTGPRERSAEELDRSKLGGGFRSYG-- 122

Query: 122 SLYDRGNRYSNGEDSPNSRRG-SRVFD-------------ESNRESLPSRADEIDDWGAG 181
                G RY  G++S +SR G SRV +             E +R+S PSRADE D+W A 
Sbjct: 123 -----GGRY--GDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAA 182

Query: 182 KKPLMGNGFERRER--GGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERR 241
           KKP+ GNGFERRER  GGGFF+S                                  E+R
Sbjct: 183 KKPISGNGFERRERGSGGGFFESQSQSKADEVDSWVSTKPSEPRRFVSSNGGGGDRFEKR 242

Query: 242 GGFPSNGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
           G F S     DS                             XXXXXXXXXXXXXXXXXXX
Sbjct: 243 GSFESLSRNRDS-----------------------------XXXXXXXXXXXXXXXXXXX 302

Query: 302 XXXXXXXXXXXXXXXPRLNLQPRSIPLN-----NENQEASVAAVKPKGSNPFGNARPREQ 361
           XXXXXXXXXXXXXX PRL LQPR++P+             V   KPKG+NPFGNARPRE+
Sbjct: 303 XXXXXXXXXXXXXXRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREE 362

Query: 362 VLAEKGQDWKKIDEQLESTKIKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWR 404
           VLAEKGQDWK+IDE+LE+ K+KD     ++ +  S  + GFG  +GR  ++R    RSWR
Sbjct: 363 VLAEKGQDWKEIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERI--ERSWR 388

[Close]

BLAST of Carg16190-RA vs. TAIR10
Match: AT3G26400.1 (eukaryotic translation initiation factor 4B1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-14
Identity = 102/319 (31.97%), Postives = 122/319 (38.24%), Query Frame = 0


Query: 62  SEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYD 121
           SEF     + P GR++   GLT ++++ LPTGPRQR+EEE+   RLGGGF S+G  S   
Sbjct: 63  SEFTTGAYTAPGGRNSV--GLTQQEILQLPTGPRQRSEEEMQPGRLGGGFSSYGGRS--- 122

Query: 122 RGNRYSNGEDSPNS-----------------------RRGSRVFDESNRESLPSRADEID 181
            G R     D  +                           SRV D       PSRADE+D
Sbjct: 123 -GGRIGRDRDDSDGSWXXXXXXXXXXXXXXXXXXXXXXNQSRVSDFPQ----PSRADEVD 182

Query: 182 DWGAGKKPLMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 241
           DWG  KKPL      R+ R  G                        XXXXXXXXXXXX  
Sbjct: 183 DWGKEKKPLPSFDQGRQGRYSG------------------------XXXXXXXXXXXXXX 242

Query: 242 ERRGGFPSNGGGADSDNWGR-KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
                        D DNWG  K + P                                  
Sbjct: 243 XXXXXXXXXSRADDVDNWGAGKRQAPVRSSTFGSSFGDSGQEERR--------------- 302

Query: 302 XXXXXXXXXXXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQV 357
                               RL L+PR +   +   E      K    NPFG ARPRE V
Sbjct: 303 --------------------RLVLEPRKV--ESGGSETPPVVEKTSKPNPFGAARPREDV 310

[Close]

BLAST of Carg16190-RA vs. TAIR10
Match: AT1G13020.1 (eukaryotic initiation factor 4B2)

HSP 1 Score: 62.8 bits (151), Expect = 5.9e-10
Identity = 140/370 (37.84%), Postives = 164/370 (44.32%), Query Frame = 0


Query: 7   PWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQA 66
           PWG  GAWA +AE  +EE   + +   ++ S  FPSL   AA          + LSEF  
Sbjct: 4   PWGGIGAWADEAERADEEQAAEATATAAD-SQSFPSL-KEAAXXXXXXXXXXMTLSEFTK 63

Query: 67  YGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRY 126
              + PS       GLT E ++ LPTGPRQR+E+E+   RLGGGF               
Sbjct: 64  GAYTAPSS-----AGLTREQMLQLPTGPRQRSEDEMQPGRLGGGFSXXXXXXXXXXXXXX 123

Query: 127 SNGEDSPNSR--------------------RGSRVFDESNRESLPSRADEIDDWGAGKKP 186
                                           SRV D        SRADE DDWG GKK 
Sbjct: 124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSNSRVSDFPQ----VSRADEDDDWGKGKKS 183

Query: 187 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 246
           L    F++  +G  +              XXXXXXXXXXXXXXXXXXXXX          
Sbjct: 184 L--PSFDQGRQGSRY-------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243

Query: 247 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
                + DNW                        XXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 244 XSKADEVDNWA---------------------AGXXXXXXXXXXXXXXXXXXXXXXXXVL 303

Query: 307 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 357
                      RL  +PR           +V   KP   +PFG ARPREQVLAEKG DWK
Sbjct: 304 PSGGGVQEERRRLVFEPRKADTEVSETPTAVKTSKP---SPFGAARPREQVLAEKGLDWK 323

[Close]

BLAST of Carg16190-RA vs. Swiss-Prot
Match: sp|Q9SZP8|IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana OX=3702 GN=EIF4B3 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-51
Identity = 192/421 (45.61%), Postives = 234/421 (55.58%), Query Frame = 0


Query: 2   AATVSPWGKPGAWALDAEEHEEELLKDQS----RQESEPSADFPSLAAAAATKPKKKKGQ 61
           AA  S W KPGAWAL+AEEHE EL +  S    +  +E S+DFPSL            GQ
Sbjct: 3   AAVSSVWAKPGAWALEAEEHEAELKQQPSPTNQKSSAEDSSDFPSLXXXXXXXXXXXXGQ 62

Query: 62  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 121
           +I L+EF  YG +K        R LT  +L+ LPTGPR+R+ EELDR++LGGGF+S+G  
Sbjct: 63  TISLAEFATYGTAKAKPAPQTER-LTQAELVALPTGPRERSAEELDRSKLGGGFRSYG-- 122

Query: 122 SLYDRGNRYSNGEDSPNSRRG-SRVFD-------------ESNRESLPSRADEIDDWGAG 181
                G RY  G++S +SR G SRV +             E +R+S PSRADE D+W A 
Sbjct: 123 -----GGRY--GDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAA 182

Query: 182 KKPLMGNGFERRER--GGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERR 241
           KKP+ GNGFERRER  GGGFF+S                                  E+R
Sbjct: 183 KKPISGNGFERRERGSGGGFFESQSQSKADEVDSWVSTKPSEPRRFVSSNGGGGDRFEKR 242

Query: 242 GGFPSNGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
           G F S     DS                             XXXXXXXXXXXXXXXXXXX
Sbjct: 243 GSFESLSRNRDS-----------------------------XXXXXXXXXXXXXXXXXXX 302

Query: 302 XXXXXXXXXXXXXXXPRLNLQPRSIPLN-----NENQEASVAAVKPKGSNPFGNARPREQ 361
           XXXXXXXXXXXXXX PRL LQPR++P+             V   KPKG+NPFGNARPRE+
Sbjct: 303 XXXXXXXXXXXXXXRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREE 362

Query: 362 VLAEKGQDWKKIDEQLESTKIKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWR 398
           VLAEKGQDWK+IDE+LE+ K+KD     ++ +  S  + GFG  +GR  ++R    RSWR
Sbjct: 363 VLAEKGQDWKEIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERI--ERSWR 382

[Close]

BLAST of Carg16190-RA vs. Swiss-Prot
Match: sp|Q9LIN5|IF4B1_ARATH (Eukaryotic translation initiation factor 4B1 OS=Arabidopsis thaliana OX=3702 GN=EIF4B1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.5e-13
Identity = 102/319 (31.97%), Postives = 122/319 (38.24%), Query Frame = 0


Query: 62  SEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYD 121
           SEF     + P GR++   GLT ++++ LPTGPRQR+EEE+   RLGGGF S+G  S   
Sbjct: 63  SEFTTGAYTAPGGRNSV--GLTQQEILQLPTGPRQRSEEEMQPGRLGGGFSSYGGRS--- 122

Query: 122 RGNRYSNGEDSPNS-----------------------RRGSRVFDESNRESLPSRADEID 181
            G R     D  +                           SRV D       PSRADE+D
Sbjct: 123 -GGRIGRDRDDSDGSWXXXXXXXXXXXXXXXXXXXXXXNQSRVSDFPQ----PSRADEVD 182

Query: 182 DWGAGKKPLMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 241
           DWG  KKPL      R+ R  G                        XXXXXXXXXXXX  
Sbjct: 183 DWGKEKKPLPSFDQGRQGRYSG------------------------XXXXXXXXXXXXXX 242

Query: 242 ERRGGFPSNGGGADSDNWGR-KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
                        D DNWG  K + P                                  
Sbjct: 243 XXXXXXXXXSRADDVDNWGAGKRQAPVRSSTFGSSFGDSGQEERR--------------- 302

Query: 302 XXXXXXXXXXXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQV 357
                               RL L+PR +   +   E      K    NPFG ARPRE V
Sbjct: 303 --------------------RLVLEPRKV--ESGGSETPPVVEKTSKPNPFGAARPREDV 310

[Close]

BLAST of Carg16190-RA vs. Swiss-Prot
Match: sp|Q9AUJ7|IF4B1_WHEAT (Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum OX=4565 GN=EIF4B PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.3e-10
Identity = 147/359 (40.95%), Postives = 175/359 (48.75%), Query Frame = 0


Query: 7   PWGKPGAWALDAEEH---------EEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQ 66
           PWG  GAWALDAE                                               
Sbjct: 4   PWGGVGAWALDAEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63

Query: 67  SIPLSEFQAYGDSKPSGR--SNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWG 126
            + LSEF  YG +    R    EP+GLT +++MMLPTGPR+R+E+ELDR+R   GF+S+G
Sbjct: 64  XLSLSEFTTYGAAGAPRRVAPAEPKGLTPQEMMMLPTGPRERSEDELDRSR---GFRSYG 123

Query: 127 QNSLYDRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFERR 186
                  G+R   G    + RR SR  D      +PSRADE D+WG  K       F   
Sbjct: 124 -------GDREPRGGGFDDDRRSSRDSD----LDMPSRADESDNWGKNK------SFSPA 183

Query: 187 ERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPSNGGGADSDN 246
               G  D  XXXXXXXXXXXXXXXXXXXXXX                +PS G G     
Sbjct: 184 PTDSGRRDRLXXXXXXXXXXXXXXXXXXXXXXP-------------SRYPSLGTGGGF-- 243

Query: 247 WGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
             R+S        XXXXXXXXXXXXXXXXXXXXXXXXXXXX                   
Sbjct: 244 --RES--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDRWVRGAVPAPMTNNGD 303

Query: 307 XPRLNLQ-PRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLE 354
            PRLNL  P+  P       A VA  +P   +PFG A+PRE+VLAEKG DW+K++ ++E
Sbjct: 304 RPRLNLNPPKRDPSATPVPAAEVARSRP---SPFGAAKPREEVLAEKGLDWRKMEGEIE 314

[Close]

BLAST of Carg16190-RA vs. Swiss-Prot
Match: sp|Q9SAD7|IF4B2_ARATH (Eukaryotic translation initiation factor 4B2 OS=Arabidopsis thaliana OX=3702 GN=EIF4B2 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-08
Identity = 140/370 (37.84%), Postives = 164/370 (44.32%), Query Frame = 0


Query: 7   PWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQA 66
           PWG  GAWA +AE  +EE   + +   ++ S  FPSL   AA          + LSEF  
Sbjct: 4   PWGGIGAWADEAERADEEQAAEATATAAD-SQSFPSL-KEAAXXXXXXXXXXMTLSEFTK 63

Query: 67  YGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRY 126
              + PS       GLT E ++ LPTGPRQR+E+E+   RLGGGF               
Sbjct: 64  GAYTAPSS-----AGLTREQMLQLPTGPRQRSEDEMQPGRLGGGFSXXXXXXXXXXXXXX 123

Query: 127 SNGEDSPNSR--------------------RGSRVFDESNRESLPSRADEIDDWGAGKKP 186
                                           SRV D        SRADE DDWG GKK 
Sbjct: 124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSNSRVSDFPQ----VSRADEDDDWGKGKKS 183

Query: 187 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 246
           L    F++  +G  +              XXXXXXXXXXXXXXXXXXXXX          
Sbjct: 184 L--PSFDQGRQGSRY-------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243

Query: 247 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
                + DNW                        XXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 244 XSKADEVDNWA---------------------AGXXXXXXXXXXXXXXXXXXXXXXXXVL 303

Query: 307 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 357
                      RL  +PR           +V   KP   +PFG ARPREQVLAEKG DWK
Sbjct: 304 PSGGGVQEERRRLVFEPRKADTEVSETPTAVKTSKP---SPFGAARPREQVLAEKGLDWK 323

[Close]

BLAST of Carg16190-RA vs. TrEMBL
Match: tr|A0A0A0LJC8|A0A0A0LJC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263980 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 5.5e-135
Identity = 315/434 (72.58%), Postives = 332/434 (76.50%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKD---QSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLKD   QSR + EPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  KPS +S++P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           ++GNGFERRE        XX                              +RERRGGFP+
Sbjct: 181 MVGNGFERRE--XXXXXXXXDSHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRK +G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKPDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFER-KGFGARSGRSPDDRSGPGRSWRKPESVQSRP 420
           KIDEQLES KIKDTVERA+  SGASFER KGFGARSGRSPD     GR+WRKPESV+SRP
Sbjct: 361 KIDEQLESVKIKDTVERAETSSGASFERKKGFGARSGRSPDS----GRTWRKPESVESRP 405

[Close]

BLAST of Carg16190-RA vs. TrEMBL
Match: tr|E5GC13|E5GC13_CUCME (Translation initiation factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.9e-132
Identity = 314/434 (72.35%), Postives = 329/434 (75.81%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLK---DQSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLK   DQSR +SEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  +P+ +S +P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           +MGNGFER          XXXX                            +RERRGGFP+
Sbjct: 181 MMGNGFER--XXXXXXXXXXXXHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRKS+G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKSDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFE-RKGFGARSGRSPDDRSGPGRSWRKPESVQSRP 420
           KIDEQL S KIKDTVERA+  SGASFE RKGFG RSGRSPD     GRSWRKPES  SRP
Sbjct: 361 KIDEQLGSMKIKDTVERAETSSGASFERRKGFGVRSGRSPDS----GRSWRKPESADSRP 405

[Close]

BLAST of Carg16190-RA vs. TrEMBL
Match: tr|A0A1S3C5K3|A0A1S3C5K3_CUCME (eukaryotic translation initiation factor 4B3-like OS=Cucumis melo OX=3656 GN=LOC103497303 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 8.4e-128
Identity = 305/421 (72.45%), Postives = 319/421 (75.77%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLK---DQSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLK   DQSR +SEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  +P+ +S +P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           +MGNGFER          XXXX                            +RERRGGFP+
Sbjct: 181 MMGNGFER--XXXXXXXXXXXXHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRKS+G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKSDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFE-RKGFGARSGRSPDDRSGPGRSWRKPESVQSRP 407
           KIDEQL S KIKDTVERA+  SGASFE RKGFG RSGRSPD     GRSWRKPES  SRP
Sbjct: 361 KIDEQLGSMKIKDTVERAETSSGASFERRKGFGVRSGRSPDS----GRSWRKPESADSRP 392

[Close]

BLAST of Carg16190-RA vs. TrEMBL
Match: tr|A0A1S3BJA3|A0A1S3BJA3_CUCME (eukaryotic translation initiation factor 4B3 OS=Cucumis melo OX=3656 GN=LOC103490303 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.5e-71
Identity = 196/417 (47.00%), Postives = 244/417 (58.51%), Query Frame = 0


Query: 1   MAATV-SPWGKPGAWALDAEEHEEELLKDQSRQ-ESEPSADFPSLAAAAATKPKKKKGQS 60
           MAA V SPWGKPGAWALD+EEHE +LLK+Q +Q + E S DFPSL  A ATK +KKKGQ+
Sbjct: 1   MAAMVSSPWGKPGAWALDSEEHEAQLLKEQEQQKQPELSLDFPSLNDALATK-QKKKGQT 60

Query: 61  IPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNS 120
           + L+EF  YG +             +ED M LPTGPRQRT EELDRNRLGGGF+++G N 
Sbjct: 61  LSLAEFNTYGTTDS----------RSEDFMELPTGPRQRTAEELDRNRLGGGFRNYGSNG 120

Query: 121 LYDRGNRYSNGEDSPNSRRGS-------------RVFDESNRESLPSRADEIDDWGAGKK 180
            Y+R NRYSN +DS NS+ GS                  S++E   SRADE+D+W   KK
Sbjct: 121 SYERNNRYSNADDSSNSKWGSSRVSXXXXXXXXXXXXXXSSKEFTSSRADEVDNWALTKK 180

Query: 181 PLMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFP 240
           P+ GNGFERRERG GF DS        XXXXXXXXXXXX            +RERRGGF 
Sbjct: 181 PMAGNGFERRERGLGFSDS-------QXXXXXXXXXXXXNKSNIPSGGRRFDRERRGGFT 240

Query: 241 SNGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           ++GGGADSDNWGRK E                                            
Sbjct: 241 ASGGGADSDNWGRKKE-------------------------------------------- 300

Query: 301 XXXXXXXXXXXPRLNLQPRSIPL-NNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQD 360
                      P+L+LQPR++P+ + ++ E S  A + K SNPFG ARPRE+VLAEKG D
Sbjct: 301 EGNAGGVIGSRPKLSLQPRTLPVGDGKSSEISATAARSKSSNPFGAARPREEVLAEKGHD 352

Query: 361 WKKIDEQLESTKIKD--TVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPE 400
           WKK+DEQLES KIK+    E+ ++ +  SF ++ F   + R+ +DR+   +SWRKPE
Sbjct: 361 WKKLDEQLES-KIKEVSVEEKTEKSNAISFRKRSFDNGNSRAAEDRT--EKSWRKPE 352

[Close]

BLAST of Carg16190-RA vs. TrEMBL
Match: tr|F6I126|F6I126_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0038g01950 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.5e-71
Identity = 195/437 (44.62%), Postives = 234/437 (53.55%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQ-------------SRQESEPSADFPSLAAAA 60
           MAATVSPWGK GAWALD+EEHE+ELL+ Q              RQ  E SADFP+LA AA
Sbjct: 1   MAATVSPWGKAGAWALDSEEHEDELLQQQRDDKVNGEFSGGEGRQAPEASADFPTLATAA 60

Query: 61  ATKPKKKKGQSIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRL 120
           ATK KKKKGQ++ LSEF A+G  K S + ++ +GLT EDLMMLPTGPRQR+ EELDR RL
Sbjct: 61  ATKSKKKKGQTLSLSEFSAFGAGK-SAQPSQTKGLTHEDLMMLPTGPRQRSAEELDRGRL 120

Query: 121 GGGFKSWGQNSLYDRG-NRYSNGEDSPNSRRGSRVFDE---------SNRESLPSRADEI 180
           GGGF+S+G N  Y+ G +RY  GEDS N R G R  +E         S+RE  PSRADEI
Sbjct: 121 GGGFRSYGSNGSYEGGRSRYGGGEDSANPRWGPRGSEERRQGGFGRDSSRELAPSRADEI 180

Query: 181 DDWGAGKKPLMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 240
           DDWGA KK  +GNGFERR+R GGFFDS                         XXXXX   
Sbjct: 181 DDWGAAKKSTVGNGFERRDR-GGFFDSQSRADESASWVSNKSFTPSEGRRFGXXXXXESL 240

Query: 241 RERRGGFPSNGGGADSDNWG----RKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           RER                     +K EG                               
Sbjct: 241 RERXXXXXXXXXXXXXXXXXXXXRKKEEG------------------------------- 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARP 360
                                  P+L LQPR++P+N+  Q  S +  KPKG NPFG ARP
Sbjct: 301 ------------SGNANGSAGSRPKLILQPRTVPVNDGQQPGSGSVAKPKGPNPFGEARP 360

Query: 361 REQVLAEKGQDWKKIDEQLESTKIKDT-VERADRFSGASFERKGFGARSGRSPDDRSGPG 410
           RE+VLAEKGQDWK+I+E+LES K+KD       +  G SF ++ FG+ + R+    S   
Sbjct: 361 REEVLAEKGQDWKEIEEKLESVKLKDVGSPGVGQTDGPSFGKRSFGSGNARASLPESRSE 392

The following BLAST results are available for this feature:

BLAST of Carg16190-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944463.1	9.0e-174	91.92	eukaryotic translation initiation factor 4B3-like [Cucurbita moschata]	[more]
XP_023512685.1	4.5e-165	89.81	eukaryotic translation initiation factor 4B3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985732.1	5.9e-165	89.60	eukaryotic translation initiation factor 4B3-like [Cucurbita maxima]	[more]
XP_004147022.1	8.3e-135	72.58	PREDICTED: eukaryotic translation initiation factor 4B-like [Cucumis sativus] >K...	[more]
ADN34011.1	2.9e-132	72.35	translation initiation factor [Cucumis melo subsp. melo]	[more]

BLAST of Carg16190-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38710.2	3.3e-53	45.43	glycine-rich protein	[more]
AT3G26400.1	3.0e-14	31.97	eukaryotic translation initiation factor 4B1	[more]
AT1G13020.1	5.9e-10	37.84	eukaryotic initiation factor 4B2	[more]

BLAST of Carg16190-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZP8\|IF4B3_ARATH	1.3e-51	45.61	Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9LIN5\|IF4B1_ARATH	5.5e-13	31.97	Eukaryotic translation initiation factor 4B1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9AUJ7\|IF4B1_WHEAT	4.3e-10	40.95	Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum OX=4565 GN=EIF...	[more]
sp\|Q9SAD7\|IF4B2_ARATH	1.1e-08	37.84	Eukaryotic translation initiation factor 4B2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Carg16190-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJC8\|A0A0A0LJC8_CUCSA	5.5e-135	72.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263980 PE=4 SV=1	[more]
tr\|E5GC13\|E5GC13_CUCME	1.9e-132	72.35	Translation initiation factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3C5K3\|A0A1S3C5K3_CUCME	8.4e-128	72.45	eukaryotic translation initiation factor 4B3-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A1S3BJA3\|A0A1S3BJA3_CUCME	9.5e-71	47.00	eukaryotic translation initiation factor 4B3 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|F6I126\|F6I126_VITVI	9.5e-71	44.62	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0038g01950 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR010433	EIF-4B_pln

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg16190	Carg16190	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16190-RA.three_prime_UTR.1	Carg16190-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16190-RA.CDS.2	Carg16190-RA.CDS.2	CDS
Carg16190-RA.CDS.1	Carg16190-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16190-RA.exon.2	Carg16190-RA.exon.2	exon
Carg16190-RA.exon.1	Carg16190-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg16190-RA	Carg16190-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010433	Plant specific eukaryotic initiation factor 4B	PFAM	PF06273	eIF-4B	coord: 7..239 e-value: 1.2E-39 score: 136.7 coord: 241..375 e-value: 2.5E-17 score: 63.0
IPR010433	Plant specific eukaryotic initiation factor 4B	PANTHER	PTHR32091	FAMILY NOT NAMED	coord: 1..242 coord: 246..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..419
None	No IPR available	PANTHER	PTHR32091:SF17	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3	coord: 1..242 coord: 246..417