Carg16190 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16190
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	eukaryotic translation initiation factor 4B3-like
Location	Cucurbita_argyrosperma_scaffold_068 : 601238 .. 603480 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAACTGTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTGCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTCTAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACACCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGCGAAGAGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGTGAGAACGGTGGTGGGGCTCATTCTGATAACTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAGGGCCGACAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGGAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGGTTTGTATTATACTCCAAAACTCTTTTGCTGCTTTTGATGGTTAAGTAGTTGGTACATATGATTCTAGTTGTTCCCTTGTATTTGTTTGTGGCTTGTGGTGCTTTATATGTGCTCTAGGTTGTCCTTTGGATAGATTGCTTTATTTGCTGCTTTCTTCTAGGATTCATGTAGAGTTAGAGGTACTTTAGGCGAACTAAGTCCAGCCCAAGTCCACCGCTAGCAGGATATTGTCCTCGGTTTTTCCTTTTTGGGCTTTCCCCCAAGGTTTTTAAAATGCCTAGGTTAGGGCAAGGTTTCCACCCTTATAAAAAAAATGTTTCATTCCCCTCTCCAACCGATGTGGGATCCAACCATCTATCCCCTTGGAGGCCTAGCGTCCTCGTGGATACACCGTCCGGTGTCTAGCTCTGATATCATTTGTAATAGCCCCAAGCTCACCGCTAGCAGATAGTATCGTCTTTGGACTTTCTCTTTAAGGGCTTCCCCTCAAGGTTTTAAAATGCGTCTACTAGGAAGAGATTTTAACTCTTATGCTAAATGTTTCGTCATTCCCTTCTCTAACCAATGTGGGATCTCACGAAGACGGTTCTTTTTTCTCTCGTGGTAAGTATGGTTTGAAAGACACCTATGGAAAGTTGAATTCTGCGTAAATGATAGTTTTTGGTGGCTTTTTGTTATCTTTTGAATCAGAATAGACACAAAAAAAAAAAAAAAAAAAAAAAGAACTGTTCATGTGACTTGCTTTCCAAGGATGCTCGTTCTCTCCATTAAGACTTGCTCGATCTTGAACTAGAAGTAATTTGTAGAACTCTCAGCCAGTTTAGCTTAAATGTGATGTAGAGGAGGATGTTTGATTCAGTGACTTGATTCGGTGTTGCAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAACTGAAGAGGGTATTCTTTCTATGCAGTTGAAATAATTGAGTTTGCTGATATGATATGGTATGATATTCATTATTCAAAGTTCTTGAACTGTTCATGTGTTCTTCCT

mRNA sequence

ATGGCGGCAACTGTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTGCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTCTAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACACCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGCGAAGAGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGTGAGAACGGTGGTGGGGCTCATTCTGATAACTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAGGGCCGACAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGGAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAACTGAAGAGGGTATTCTTTCTATGCAGTTGAAATAATTGAGTTTGCTGATATGATATGGTATGATATTCATTATTCAAAGTTCTTGAACTGTTCATGTGTTCTTCCT

Coding sequence (CDS)

ATGGCGGCAACTGTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTGCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTCTAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACACCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGCGAAGAGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGTGAGAACGGTGGTGGGGCTCATTCTGATAACTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAGGGCCGACAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGGAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAACTGA

Protein sequence

MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFERRERGGGFFDSQSSKADESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWGRKSEGPKGRIGENGGGAHSDNWGRKFEGARGGFGENGGGADSDNWGKKSEGVRGGIGERPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGEN

Homology

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BLAST of Carg16190 vs. NCBI nr
Match: XP_022944463.1 (eukaryotic translation initiation factor 4B3-like [Cucurbita moschata])

HSP 1 Score: 619.4 bits (1596), Expect = 9.0e-174
Identity = 387/421 (91.92%), Postives = 387/421 (91.92%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60
           MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60

Query: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120
           LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY
Sbjct: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120

Query: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFER--RERG 180
           DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFER  RERG
Sbjct: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFERRERERG 180

Query: 181 GGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPSNGGGADSDNWGR 240
           GGFFDS                                ERERRGGFPSNGGGADSDNWGR
Sbjct: 181 GGFFDSQSSKADESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWGR 240

Query: 241 KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPR 300
           KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPR
Sbjct: 241 KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPR 300

Query: 301 LNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIK 360
           LNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIK
Sbjct: 301 LNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIK 360

Query: 361 DTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGE 420
           DTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGE
Sbjct: 361 DTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGE 420

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BLAST of Carg16190 vs. NCBI nr
Match: XP_023512685.1 (eukaryotic translation initiation factor 4B3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.5 bits (1521), Expect = 4.5e-165
Identity = 379/422 (89.81%), Postives = 382/422 (90.52%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60
           MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60

Query: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120
           LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY
Sbjct: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120

Query: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFER---RER 180
           DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKP+MGNGFER      
Sbjct: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPIMGNGFERXXXXXX 180

Query: 181 GGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPSNGGGADSDNWG 240
                  XXXXX                           ERERRGGFPSNGGGADSDNWG
Sbjct: 181 XXXXXXXXXXXXDESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWG 240

Query: 241 RKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
           RKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP
Sbjct: 241 RKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300

Query: 301 RLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKI 360
           RLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKI
Sbjct: 301 RLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKI 360

Query: 361 KDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGG 420
           KDTVE+A+RFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGG
Sbjct: 361 KDTVEKAERFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGG 420

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BLAST of Carg16190 vs. NCBI nr
Match: XP_022985732.1 (eukaryotic translation initiation factor 4B3-like [Cucurbita maxima])

HSP 1 Score: 590.1 bits (1520), Expect = 5.9e-165
Identity = 379/423 (89.60%), Postives = 382/423 (90.31%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60
           MAAT+SPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP
Sbjct: 1   MAATLSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIP 60

Query: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120
           LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY
Sbjct: 61  LSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLY 120

Query: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFER----RE 180
           DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKP+MGNGFER      
Sbjct: 121 DRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPIMGNGFERXXXXXX 180

Query: 181 RGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPSNGGGADSDNW 240
                   XXXXX                           ERERRGGFPSNGGGADSDNW
Sbjct: 181 XXXXXXXXXXXXXDESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNW 240

Query: 241 GRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           GRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 PRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTK 360
           PRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTK
Sbjct: 301 PRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTK 360

Query: 361 IKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAG 420
           IKDTVERA+RFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAG
Sbjct: 361 IKDTVERAERFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAG 420

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BLAST of Carg16190 vs. NCBI nr
Match: XP_004147022.1 (PREDICTED: eukaryotic translation initiation factor 4B-like [Cucumis sativus] >KGN61903.1 hypothetical protein Csa_2G263980 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 8.3e-135
Identity = 315/434 (72.58%), Postives = 332/434 (76.50%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKD---QSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLKD   QSR + EPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  KPS +S++P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           ++GNGFERRE        XX                              +RERRGGFP+
Sbjct: 181 MVGNGFERRE--XXXXXXXXDSHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRK +G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKPDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFER-KGFGARSGRSPDDRSGPGRSWRKPESVQSRP 420
           KIDEQLES KIKDTVERA+  SGASFER KGFGARSGRSPD     GR+WRKPESV+SRP
Sbjct: 361 KIDEQLESVKIKDTVERAETSSGASFERKKGFGARSGRSPDS----GRTWRKPESVESRP 405

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BLAST of Carg16190 vs. NCBI nr
Match: ADN34011.1 (translation initiation factor [Cucumis melo subsp. melo])

HSP 1 Score: 481.5 bits (1238), Expect = 2.9e-132
Identity = 314/434 (72.35%), Postives = 329/434 (75.81%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLK---DQSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLK   DQSR +SEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  +P+ +S +P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           +MGNGFER          XXXX                            +RERRGGFP+
Sbjct: 181 MMGNGFER--XXXXXXXXXXXXHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRKS+G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKSDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFE-RKGFGARSGRSPDDRSGPGRSWRKPESVQSRP 420
           KIDEQL S KIKDTVERA+  SGASFE RKGFG RSGRSPD     GRSWRKPES  SRP
Sbjct: 361 KIDEQLGSMKIKDTVERAETSSGASFERRKGFGVRSGRSPDS----GRSWRKPESADSRP 405

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BLAST of Carg16190 vs. TAIR10
Match: AT4G38710.2 (glycine-rich protein)

HSP 1 Score: 206.5 bits (524), Expect = 3.3e-53
Identity = 194/427 (45.43%), Postives = 237/427 (55.50%), Query Frame = 0


Query: 2   AATVSPWGKPGAWALDAEEHEEELLKDQS----RQESEPSADFPSLAAAAATKPKKKKGQ 61
           AA  S W KPGAWAL+AEEHE EL +  S    +  +E S+DFPSL            GQ
Sbjct: 3   AAVSSVWAKPGAWALEAEEHEAELKQQPSPTNQKSSAEDSSDFPSLXXXXXXXXXXXXGQ 62

Query: 62  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 121
           +I L+EF  YG +K        R LT  +L+ LPTGPR+R+ EELDR++LGGGF+S+G  
Sbjct: 63  TISLAEFATYGTAKAKPAPQTER-LTQAELVALPTGPRERSAEELDRSKLGGGFRSYG-- 122

Query: 122 SLYDRGNRYSNGEDSPNSRRG-SRVFD-------------ESNRESLPSRADEIDDWGAG 181
                G RY  G++S +SR G SRV +             E +R+S PSRADE D+W A 
Sbjct: 123 -----GGRY--GDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAA 182

Query: 182 KKPLMGNGFERRER--GGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERR 241
           KKP+ GNGFERRER  GGGFF+S                                  E+R
Sbjct: 183 KKPISGNGFERRERGSGGGFFESQSQSKADEVDSWVSTKPSEPRRFVSSNGGGGDRFEKR 242

Query: 242 GGFPSNGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
           G F S     DS                             XXXXXXXXXXXXXXXXXXX
Sbjct: 243 GSFESLSRNRDS-----------------------------XXXXXXXXXXXXXXXXXXX 302

Query: 302 XXXXXXXXXXXXXXXPRLNLQPRSIPLN-----NENQEASVAAVKPKGSNPFGNARPREQ 361
           XXXXXXXXXXXXXX PRL LQPR++P+             V   KPKG+NPFGNARPRE+
Sbjct: 303 XXXXXXXXXXXXXXRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREE 362

Query: 362 VLAEKGQDWKKIDEQLESTKIKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWR 404
           VLAEKGQDWK+IDE+LE+ K+KD     ++ +  S  + GFG  +GR  ++R    RSWR
Sbjct: 363 VLAEKGQDWKEIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERI--ERSWR 388

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BLAST of Carg16190 vs. TAIR10
Match: AT3G26400.1 (eukaryotic translation initiation factor 4B1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-14
Identity = 102/319 (31.97%), Postives = 122/319 (38.24%), Query Frame = 0


Query: 62  SEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYD 121
           SEF     + P GR++   GLT ++++ LPTGPRQR+EEE+   RLGGGF S+G  S   
Sbjct: 63  SEFTTGAYTAPGGRNSV--GLTQQEILQLPTGPRQRSEEEMQPGRLGGGFSSYGGRS--- 122

Query: 122 RGNRYSNGEDSPNS-----------------------RRGSRVFDESNRESLPSRADEID 181
            G R     D  +                           SRV D       PSRADE+D
Sbjct: 123 -GGRIGRDRDDSDGSWXXXXXXXXXXXXXXXXXXXXXXNQSRVSDFPQ----PSRADEVD 182

Query: 182 DWGAGKKPLMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 241
           DWG  KKPL      R+ R  G                        XXXXXXXXXXXX  
Sbjct: 183 DWGKEKKPLPSFDQGRQGRYSG------------------------XXXXXXXXXXXXXX 242

Query: 242 ERRGGFPSNGGGADSDNWGR-KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
                        D DNWG  K + P                                  
Sbjct: 243 XXXXXXXXXSRADDVDNWGAGKRQAPVRSSTFGSSFGDSGQEERR--------------- 302

Query: 302 XXXXXXXXXXXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQV 357
                               RL L+PR +   +   E      K    NPFG ARPRE V
Sbjct: 303 --------------------RLVLEPRKV--ESGGSETPPVVEKTSKPNPFGAARPREDV 310

[Close]

BLAST of Carg16190 vs. TAIR10
Match: AT1G13020.1 (eukaryotic initiation factor 4B2)

HSP 1 Score: 62.8 bits (151), Expect = 5.9e-10
Identity = 140/370 (37.84%), Postives = 164/370 (44.32%), Query Frame = 0


Query: 7   PWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQA 66
           PWG  GAWA +AE  +EE   + +   ++ S  FPSL   AA          + LSEF  
Sbjct: 4   PWGGIGAWADEAERADEEQAAEATATAAD-SQSFPSL-KEAAXXXXXXXXXXMTLSEFTK 63

Query: 67  YGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRY 126
              + PS       GLT E ++ LPTGPRQR+E+E+   RLGGGF               
Sbjct: 64  GAYTAPSS-----AGLTREQMLQLPTGPRQRSEDEMQPGRLGGGFSXXXXXXXXXXXXXX 123

Query: 127 SNGEDSPNSR--------------------RGSRVFDESNRESLPSRADEIDDWGAGKKP 186
                                           SRV D        SRADE DDWG GKK 
Sbjct: 124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSNSRVSDFPQ----VSRADEDDDWGKGKKS 183

Query: 187 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 246
           L    F++  +G  +              XXXXXXXXXXXXXXXXXXXXX          
Sbjct: 184 L--PSFDQGRQGSRY-------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243

Query: 247 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
                + DNW                        XXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 244 XSKADEVDNWA---------------------AGXXXXXXXXXXXXXXXXXXXXXXXXVL 303

Query: 307 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 357
                      RL  +PR           +V   KP   +PFG ARPREQVLAEKG DWK
Sbjct: 304 PSGGGVQEERRRLVFEPRKADTEVSETPTAVKTSKP---SPFGAARPREQVLAEKGLDWK 323

[Close]

BLAST of Carg16190 vs. Swiss-Prot
Match: sp|Q9SZP8|IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana OX=3702 GN=EIF4B3 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-51
Identity = 192/421 (45.61%), Postives = 234/421 (55.58%), Query Frame = 0


Query: 2   AATVSPWGKPGAWALDAEEHEEELLKDQS----RQESEPSADFPSLAAAAATKPKKKKGQ 61
           AA  S W KPGAWAL+AEEHE EL +  S    +  +E S+DFPSL            GQ
Sbjct: 3   AAVSSVWAKPGAWALEAEEHEAELKQQPSPTNQKSSAEDSSDFPSLXXXXXXXXXXXXGQ 62

Query: 62  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 121
           +I L+EF  YG +K        R LT  +L+ LPTGPR+R+ EELDR++LGGGF+S+G  
Sbjct: 63  TISLAEFATYGTAKAKPAPQTER-LTQAELVALPTGPRERSAEELDRSKLGGGFRSYG-- 122

Query: 122 SLYDRGNRYSNGEDSPNSRRG-SRVFD-------------ESNRESLPSRADEIDDWGAG 181
                G RY  G++S +SR G SRV +             E +R+S PSRADE D+W A 
Sbjct: 123 -----GGRY--GDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAA 182

Query: 182 KKPLMGNGFERRER--GGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERR 241
           KKP+ GNGFERRER  GGGFF+S                                  E+R
Sbjct: 183 KKPISGNGFERRERGSGGGFFESQSQSKADEVDSWVSTKPSEPRRFVSSNGGGGDRFEKR 242

Query: 242 GGFPSNGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
           G F S     DS                             XXXXXXXXXXXXXXXXXXX
Sbjct: 243 GSFESLSRNRDS-----------------------------XXXXXXXXXXXXXXXXXXX 302

Query: 302 XXXXXXXXXXXXXXXPRLNLQPRSIPLN-----NENQEASVAAVKPKGSNPFGNARPREQ 361
           XXXXXXXXXXXXXX PRL LQPR++P+             V   KPKG+NPFGNARPRE+
Sbjct: 303 XXXXXXXXXXXXXXRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREE 362

Query: 362 VLAEKGQDWKKIDEQLESTKIKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWR 398
           VLAEKGQDWK+IDE+LE+ K+KD     ++ +  S  + GFG  +GR  ++R    RSWR
Sbjct: 363 VLAEKGQDWKEIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERI--ERSWR 382

[Close]

BLAST of Carg16190 vs. Swiss-Prot
Match: sp|Q9LIN5|IF4B1_ARATH (Eukaryotic translation initiation factor 4B1 OS=Arabidopsis thaliana OX=3702 GN=EIF4B1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.5e-13
Identity = 102/319 (31.97%), Postives = 122/319 (38.24%), Query Frame = 0


Query: 62  SEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYD 121
           SEF     + P GR++   GLT ++++ LPTGPRQR+EEE+   RLGGGF S+G  S   
Sbjct: 63  SEFTTGAYTAPGGRNSV--GLTQQEILQLPTGPRQRSEEEMQPGRLGGGFSSYGGRS--- 122

Query: 122 RGNRYSNGEDSPNS-----------------------RRGSRVFDESNRESLPSRADEID 181
            G R     D  +                           SRV D       PSRADE+D
Sbjct: 123 -GGRIGRDRDDSDGSWXXXXXXXXXXXXXXXXXXXXXXNQSRVSDFPQ----PSRADEVD 182

Query: 182 DWGAGKKPLMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 241
           DWG  KKPL      R+ R  G                        XXXXXXXXXXXX  
Sbjct: 183 DWGKEKKPLPSFDQGRQGRYSG------------------------XXXXXXXXXXXXXX 242

Query: 242 ERRGGFPSNGGGADSDNWGR-KSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
                        D DNWG  K + P                                  
Sbjct: 243 XXXXXXXXXSRADDVDNWGAGKRQAPVRSSTFGSSFGDSGQEERR--------------- 302

Query: 302 XXXXXXXXXXXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQV 357
                               RL L+PR +   +   E      K    NPFG ARPRE V
Sbjct: 303 --------------------RLVLEPRKV--ESGGSETPPVVEKTSKPNPFGAARPREDV 310

[Close]

BLAST of Carg16190 vs. Swiss-Prot
Match: sp|Q9AUJ7|IF4B1_WHEAT (Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum OX=4565 GN=EIF4B PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.3e-10
Identity = 147/359 (40.95%), Postives = 175/359 (48.75%), Query Frame = 0


Query: 7   PWGKPGAWALDAEEH---------EEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQ 66
           PWG  GAWALDAE                                               
Sbjct: 4   PWGGVGAWALDAEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63

Query: 67  SIPLSEFQAYGDSKPSGR--SNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWG 126
            + LSEF  YG +    R    EP+GLT +++MMLPTGPR+R+E+ELDR+R   GF+S+G
Sbjct: 64  XLSLSEFTTYGAAGAPRRVAPAEPKGLTPQEMMMLPTGPRERSEDELDRSR---GFRSYG 123

Query: 127 QNSLYDRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFERR 186
                  G+R   G    + RR SR  D      +PSRADE D+WG  K       F   
Sbjct: 124 -------GDREPRGGGFDDDRRSSRDSD----LDMPSRADESDNWGKNK------SFSPA 183

Query: 187 ERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPSNGGGADSDN 246
               G  D  XXXXXXXXXXXXXXXXXXXXXX                +PS G G     
Sbjct: 184 PTDSGRRDRLXXXXXXXXXXXXXXXXXXXXXXP-------------SRYPSLGTGGGF-- 243

Query: 247 WGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
             R+S        XXXXXXXXXXXXXXXXXXXXXXXXXXXX                   
Sbjct: 244 --RES--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDRWVRGAVPAPMTNNGD 303

Query: 307 XPRLNLQ-PRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLE 354
            PRLNL  P+  P       A VA  +P   +PFG A+PRE+VLAEKG DW+K++ ++E
Sbjct: 304 RPRLNLNPPKRDPSATPVPAAEVARSRP---SPFGAAKPREEVLAEKGLDWRKMEGEIE 314

[Close]

BLAST of Carg16190 vs. Swiss-Prot
Match: sp|Q9SAD7|IF4B2_ARATH (Eukaryotic translation initiation factor 4B2 OS=Arabidopsis thaliana OX=3702 GN=EIF4B2 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-08
Identity = 140/370 (37.84%), Postives = 164/370 (44.32%), Query Frame = 0


Query: 7   PWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQA 66
           PWG  GAWA +AE  +EE   + +   ++ S  FPSL   AA          + LSEF  
Sbjct: 4   PWGGIGAWADEAERADEEQAAEATATAAD-SQSFPSL-KEAAXXXXXXXXXXMTLSEFTK 63

Query: 67  YGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRY 126
              + PS       GLT E ++ LPTGPRQR+E+E+   RLGGGF               
Sbjct: 64  GAYTAPSS-----AGLTREQMLQLPTGPRQRSEDEMQPGRLGGGFSXXXXXXXXXXXXXX 123

Query: 127 SNGEDSPNSR--------------------RGSRVFDESNRESLPSRADEIDDWGAGKKP 186
                                           SRV D        SRADE DDWG GKK 
Sbjct: 124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSNSRVSDFPQ----VSRADEDDDWGKGKKS 183

Query: 187 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 246
           L    F++  +G  +              XXXXXXXXXXXXXXXXXXXXX          
Sbjct: 184 L--PSFDQGRQGSRY-------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243

Query: 247 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
                + DNW                        XXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 244 XSKADEVDNWA---------------------AGXXXXXXXXXXXXXXXXXXXXXXXXVL 303

Query: 307 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 357
                      RL  +PR           +V   KP   +PFG ARPREQVLAEKG DWK
Sbjct: 304 PSGGGVQEERRRLVFEPRKADTEVSETPTAVKTSKP---SPFGAARPREQVLAEKGLDWK 323

[Close]

BLAST of Carg16190 vs. TrEMBL
Match: tr|A0A0A0LJC8|A0A0A0LJC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263980 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 5.5e-135
Identity = 315/434 (72.58%), Postives = 332/434 (76.50%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKD---QSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLKD   QSR + EPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  KPS +S++P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           ++GNGFERRE        XX                              +RERRGGFP+
Sbjct: 181 MVGNGFERRE--XXXXXXXXDSHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRK +G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKPDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFER-KGFGARSGRSPDDRSGPGRSWRKPESVQSRP 420
           KIDEQLES KIKDTVERA+  SGASFER KGFGARSGRSPD     GR+WRKPESV+SRP
Sbjct: 361 KIDEQLESVKIKDTVERAETSSGASFERKKGFGARSGRSPDS----GRTWRKPESVESRP 405

[Close]

BLAST of Carg16190 vs. TrEMBL
Match: tr|E5GC13|E5GC13_CUCME (Translation initiation factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.9e-132
Identity = 314/434 (72.35%), Postives = 329/434 (75.81%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLK---DQSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLK   DQSR +SEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  +P+ +S +P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           +MGNGFER          XXXX                            +RERRGGFP+
Sbjct: 181 MMGNGFER--XXXXXXXXXXXXHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRKS+G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKSDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFE-RKGFGARSGRSPDDRSGPGRSWRKPESVQSRP 420
           KIDEQL S KIKDTVERA+  SGASFE RKGFG RSGRSPD     GRSWRKPES  SRP
Sbjct: 361 KIDEQLGSMKIKDTVERAETSSGASFERRKGFGVRSGRSPDS----GRSWRKPESADSRP 405

[Close]

BLAST of Carg16190 vs. TrEMBL
Match: tr|A0A1S3C5K3|A0A1S3C5K3_CUCME (eukaryotic translation initiation factor 4B3-like OS=Cucumis melo OX=3656 GN=LOC103497303 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 8.4e-128
Identity = 305/421 (72.45%), Postives = 319/421 (75.77%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLK---DQSRQESEPSADFPSLAAAAATKPKKKKGQ 60
           MAATVSPWGKPGAWALDAEEHE ELLK   DQSR +SEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEFQ YG  +P+ +S +P+GLTAEDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSPNSRRGSRVFDES-----------NRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDSPNSRR SRVFDES            RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 LMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFPS 240
           +MGNGFER          XXXX                            +RERRGGFP+
Sbjct: 181 MMGNGFER--XXXXXXXXXXXXHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPT 240

Query: 241 NGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +GGGADSDNWGRKS+G                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SGGGADSDNWGRKSDG-----------------------XXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWK 360
           XXXXXXXXXXPRLNLQPRSIPLNN NQEAS  AVKPKGSNPFGNARPRE+VLAEKGQDWK
Sbjct: 301 XXXXXXXXXXPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWK 360

Query: 361 KIDEQLESTKIKDTVERADRFSGASFE-RKGFGARSGRSPDDRSGPGRSWRKPESVQSRP 407
           KIDEQL S KIKDTVERA+  SGASFE RKGFG RSGRSPD     GRSWRKPES  SRP
Sbjct: 361 KIDEQLGSMKIKDTVERAETSSGASFERRKGFGVRSGRSPDS----GRSWRKPESADSRP 392

[Close]

BLAST of Carg16190 vs. TrEMBL
Match: tr|A0A1S3BJA3|A0A1S3BJA3_CUCME (eukaryotic translation initiation factor 4B3 OS=Cucumis melo OX=3656 GN=LOC103490303 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.5e-71
Identity = 196/417 (47.00%), Postives = 244/417 (58.51%), Query Frame = 0


Query: 1   MAATV-SPWGKPGAWALDAEEHEEELLKDQSRQ-ESEPSADFPSLAAAAATKPKKKKGQS 60
           MAA V SPWGKPGAWALD+EEHE +LLK+Q +Q + E S DFPSL  A ATK +KKKGQ+
Sbjct: 1   MAAMVSSPWGKPGAWALDSEEHEAQLLKEQEQQKQPELSLDFPSLNDALATK-QKKKGQT 60

Query: 61  IPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNS 120
           + L+EF  YG +             +ED M LPTGPRQRT EELDRNRLGGGF+++G N 
Sbjct: 61  LSLAEFNTYGTTDS----------RSEDFMELPTGPRQRTAEELDRNRLGGGFRNYGSNG 120

Query: 121 LYDRGNRYSNGEDSPNSRRGS-------------RVFDESNRESLPSRADEIDDWGAGKK 180
            Y+R NRYSN +DS NS+ GS                  S++E   SRADE+D+W   KK
Sbjct: 121 SYERNNRYSNADDSSNSKWGSSRVSXXXXXXXXXXXXXXSSKEFTSSRADEVDNWALTKK 180

Query: 181 PLMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRGGFP 240
           P+ GNGFERRERG GF DS        XXXXXXXXXXXX            +RERRGGF 
Sbjct: 181 PMAGNGFERRERGLGFSDS-------QXXXXXXXXXXXXNKSNIPSGGRRFDRERRGGFT 240

Query: 241 SNGGGADSDNWGRKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           ++GGGADSDNWGRK E                                            
Sbjct: 241 ASGGGADSDNWGRKKE-------------------------------------------- 300

Query: 301 XXXXXXXXXXXPRLNLQPRSIPL-NNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQD 360
                      P+L+LQPR++P+ + ++ E S  A + K SNPFG ARPRE+VLAEKG D
Sbjct: 301 EGNAGGVIGSRPKLSLQPRTLPVGDGKSSEISATAARSKSSNPFGAARPREEVLAEKGHD 352

Query: 361 WKKIDEQLESTKIKD--TVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPE 400
           WKK+DEQLES KIK+    E+ ++ +  SF ++ F   + R+ +DR+   +SWRKPE
Sbjct: 361 WKKLDEQLES-KIKEVSVEEKTEKSNAISFRKRSFDNGNSRAAEDRT--EKSWRKPE 352

[Close]

BLAST of Carg16190 vs. TrEMBL
Match: tr|F6I126|F6I126_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0038g01950 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.5e-71
Identity = 195/437 (44.62%), Postives = 234/437 (53.55%), Query Frame = 0


Query: 1   MAATVSPWGKPGAWALDAEEHEEELLKDQ-------------SRQESEPSADFPSLAAAA 60
           MAATVSPWGK GAWALD+EEHE+ELL+ Q              RQ  E SADFP+LA AA
Sbjct: 1   MAATVSPWGKAGAWALDSEEHEDELLQQQRDDKVNGEFSGGEGRQAPEASADFPTLATAA 60

Query: 61  ATKPKKKKGQSIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRL 120
           ATK KKKKGQ++ LSEF A+G  K S + ++ +GLT EDLMMLPTGPRQR+ EELDR RL
Sbjct: 61  ATKSKKKKGQTLSLSEFSAFGAGK-SAQPSQTKGLTHEDLMMLPTGPRQRSAEELDRGRL 120

Query: 121 GGGFKSWGQNSLYDRG-NRYSNGEDSPNSRRGSRVFDE---------SNRESLPSRADEI 180
           GGGF+S+G N  Y+ G +RY  GEDS N R G R  +E         S+RE  PSRADEI
Sbjct: 121 GGGFRSYGSNGSYEGGRSRYGGGEDSANPRWGPRGSEERRQGGFGRDSSRELAPSRADEI 180

Query: 181 DDWGAGKKPLMGNGFERRERGGGFFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 240
           DDWGA KK  +GNGFERR+R GGFFDS                         XXXXX   
Sbjct: 181 DDWGAAKKSTVGNGFERRDR-GGFFDSQSRADESASWVSNKSFTPSEGRRFGXXXXXESL 240

Query: 241 RERRGGFPSNGGGADSDNWG----RKSEGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           RER                     +K EG                               
Sbjct: 241 RERXXXXXXXXXXXXXXXXXXXXRKKEEG------------------------------- 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARP 360
                                  P+L LQPR++P+N+  Q  S +  KPKG NPFG ARP
Sbjct: 301 ------------SGNANGSAGSRPKLILQPRTVPVNDGQQPGSGSVAKPKGPNPFGEARP 360

Query: 361 REQVLAEKGQDWKKIDEQLESTKIKDT-VERADRFSGASFERKGFGARSGRSPDDRSGPG 410
           RE+VLAEKGQDWK+I+E+LES K+KD       +  G SF ++ FG+ + R+    S   
Sbjct: 361 REEVLAEKGQDWKEIEEKLESVKLKDVGSPGVGQTDGPSFGKRSFGSGNARASLPESRSE 392

The following BLAST results are available for this feature:

BLAST of Carg16190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944463.1	9.0e-174	91.92	eukaryotic translation initiation factor 4B3-like [Cucurbita moschata]	[more]
XP_023512685.1	4.5e-165	89.81	eukaryotic translation initiation factor 4B3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985732.1	5.9e-165	89.60	eukaryotic translation initiation factor 4B3-like [Cucurbita maxima]	[more]
XP_004147022.1	8.3e-135	72.58	PREDICTED: eukaryotic translation initiation factor 4B-like [Cucumis sativus] >K...	[more]
ADN34011.1	2.9e-132	72.35	translation initiation factor [Cucumis melo subsp. melo]	[more]

BLAST of Carg16190 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38710.2	3.3e-53	45.43	glycine-rich protein	[more]
AT3G26400.1	3.0e-14	31.97	eukaryotic translation initiation factor 4B1	[more]
AT1G13020.1	5.9e-10	37.84	eukaryotic initiation factor 4B2	[more]

BLAST of Carg16190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZP8\|IF4B3_ARATH	1.3e-51	45.61	Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9LIN5\|IF4B1_ARATH	5.5e-13	31.97	Eukaryotic translation initiation factor 4B1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9AUJ7\|IF4B1_WHEAT	4.3e-10	40.95	Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum OX=4565 GN=EIF...	[more]
sp\|Q9SAD7\|IF4B2_ARATH	1.1e-08	37.84	Eukaryotic translation initiation factor 4B2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Carg16190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJC8\|A0A0A0LJC8_CUCSA	5.5e-135	72.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263980 PE=4 SV=1	[more]
tr\|E5GC13\|E5GC13_CUCME	1.9e-132	72.35	Translation initiation factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3C5K3\|A0A1S3C5K3_CUCME	8.4e-128	72.45	eukaryotic translation initiation factor 4B3-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A1S3BJA3\|A0A1S3BJA3_CUCME	9.5e-71	47.00	eukaryotic translation initiation factor 4B3 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|F6I126\|F6I126_VITVI	9.5e-71	44.62	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0038g01950 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR010433	EIF-4B_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16190-RA	Carg16190-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010433	Plant specific eukaryotic initiation factor 4B	PFAM	PF06273	eIF-4B	coord: 7..239 e-value: 1.2E-39 score: 136.7 coord: 241..375 e-value: 2.5E-17 score: 63.0
IPR010433	Plant specific eukaryotic initiation factor 4B	PANTHER	PTHR32091	FAMILY NOT NAMED	coord: 1..242 coord: 246..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..419
None	No IPR available	PANTHER	PTHR32091:SF17	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3	coord: 1..242 coord: 246..417

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16190	Cla020309	Watermelon (97103) v1	carwmB0338
Carg16190	Cla015845	Watermelon (97103) v1	carwmB0335
Carg16190	Csa2G263980	Cucumber (Chinese Long) v2	carcuB0377
Carg16190	Csa7G009760	Cucumber (Chinese Long) v2	carcuB0382
Carg16190	MELO3C013373	Melon (DHL92) v3.5.1	carmeB0353
Carg16190	MELO3C020790	Melon (DHL92) v3.5.1	carmeB0349
Carg16190	ClCG02G011610	Watermelon (Charleston Gray)	carwcgB0339
Carg16190	ClCG02G004270	Watermelon (Charleston Gray)	carwcgB0336
Carg16190	CSPI02G13210	Wild cucumber (PI 183967)	carcpiB0380
Carg16190	CSPI07G00810	Wild cucumber (PI 183967)	carcpiB0386
Carg16190	Cucsa.169120	Cucumber (Gy14) v1	carcgyB0409
Carg16190	CmaCh20G007660	Cucurbita maxima (Rimu)	carcmaB0486
Carg16190	CmaCh02G003250	Cucurbita maxima (Rimu)	carcmaB0488
Carg16190	CmoCh20G007640	Cucurbita moschata (Rifu)	carcmoB0473
Carg16190	CmoCh11G017280	Cucurbita moschata (Rifu)	carcmoB0470
Carg16190	CmoCh02G003190	Cucurbita moschata (Rifu)	carcmoB0475
Carg16190	Lsi10G004690	Bottle gourd (USVL1VR-Ls)	carlsiB314
Carg16190	Lsi11G011840	Bottle gourd (USVL1VR-Ls)	carlsiB317
Carg16190	Cp4.1LG16g02980	Cucurbita pepo (Zucchini)	carcpeB0485
Carg16190	Cp4.1LG04g05040	Cucurbita pepo (Zucchini)	carcpeB0487
Carg16190	Cp4.1LG05g13070	Cucurbita pepo (Zucchini)	carcpeB0490
Carg16190	CsGy7G000650	Cucumber (Gy14) v2	carcgybB0362
Carg16190	CsGy2G013160	Cucumber (Gy14) v2	carcgybB0356
Carg16190	MELO3C020790.2	Melon (DHL92) v3.6.1	carmedB0355
Carg16190	MELO3C013373.2	Melon (DHL92) v3.6.1	carmedB0359
Carg16190	CsaV3_2G015760	Cucumber (Chinese Long) v3	carcucB0381
Carg16190	CsaV3_7G000840	Cucumber (Chinese Long) v3	carcucB0386
Carg16190	Cla97C02G031100	Watermelon (97103) v2	carwmbB0360
Carg16190	Cla97C02G037240	Watermelon (97103) v2	carwmbB0362
Carg16190	Bhi05G001492	Wax gourd	carwgoB0430
Carg16190	Bhi10G001499	Wax gourd	carwgoB0432

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16190	Carg19795	Silver-seed gourd	carcarB374
Carg16190	Carg05696	Silver-seed gourd	carcarB377

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16190	Silver-seed gourd	carcarB161
Carg16190	Cucurbita maxima (Rimu)	carcmaB0483
Carg16190	Cucurbita maxima (Rimu)	carcmaB0493