BLAST of Carg15965-RA vs. NCBI nr
Match:
XP_022930344.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 607.8 bits (1566), Expect = 2.5e-170
Identity = 381/386 (98.70%), Postives = 384/386 (99.48%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60
MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA
Sbjct: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60
Query: 61 SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLXXXXX 120
SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLXXXXX
Sbjct: 61 SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLXXXXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVHQ 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD+HQ
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADIHQ 180
Query: 181 KQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQA 240
KQLNGSVRMLLDAGVPEARV+FFLFYQPRMFTM LDRFREILEDVKKMGFDPSKSSFVQA
Sbjct: 181 KQLNGSVRMLLDAGVPEARVVFFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFVQA 240
Query: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300
VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW
Sbjct: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300
Query: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQKFVH 360
ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTM LVKPYMYTETQFLQKFVH
Sbjct: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTM-LVKPYMYTETQFLQKFVH 360
Query: 361 PHLKEAPQLSKLYRENVDGGIINYEI 387
PHLKEAPQLSKLYRENVDGGII+YEI
Sbjct: 361 PHLKEAPQLSKLYRENVDGGIIDYEI 385
BLAST of Carg15965-RA vs. NCBI nr
Match:
XP_023514950.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023514951.1 transcription termination factor MTERF6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 585.1 bits (1507), Expect = 1.7e-163
Identity = 371/386 (96.11%), Postives = 376/386 (97.41%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60
MS FLCKTLLQVRHLTTISPY KLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA
Sbjct: 1 MSKFLCKTLLQVRHLTTISPYSKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60
Query: 61 SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLXXXXX 120
SSASKLVSF SPEKPDLVISFFKNHGFSIANISFIIWKYPR+LLSNPNGTLLPKLXXXXX
Sbjct: 61 SSASKLVSFISPEKPDLVISFFKNHGFSIANISFIIWKYPRVLLSNPNGTLLPKLXXXXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVHQ 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD+HQ
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADIHQ 180
Query: 181 KQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQA 240
KQL+GSVRMLLDAGVPEARVMFFLFYQPRMFTM LDRFREILEDVKKMGFDPSKSSFVQA
Sbjct: 181 KQLSGSVRMLLDAGVPEARVMFFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFVQA 240
Query: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300
VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW
Sbjct: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300
Query: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQKFVH 360
ETAAIVRSPLLLS SLKKR IPRASVLLFLFQKGLT KKTM LVKPYMYTETQFL+KFV
Sbjct: 301 ETAAIVRSPLLLSLSLKKRIIPRASVLLFLFQKGLTTKKTM-LVKPYMYTETQFLEKFVR 360
Query: 361 PHLKEAPQLSKLYRENVDGGIINYEI 387
PHLKEAPQLSKLYRENVD GII+YEI
Sbjct: 361 PHLKEAPQLSKLYRENVDRGIIDYEI 385
BLAST of Carg15965-RA vs. NCBI nr
Match:
XP_022930343.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 573.9 bits (1478), Expect = 4.0e-160
Identity = 366/386 (94.82%), Postives = 374/386 (96.89%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60
MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA
Sbjct: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60
Query: 61 SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLXXXXX 120
SSASKLVSFTSPEKPDLVISFFKNHGFS A+IS II KYPR+LLSNPNGTLLPKLXXXXX
Sbjct: 61 SSASKLVSFTSPEKPDLVISFFKNHGFSNAHISLIIGKYPRMLLSNPNGTLLPKLXXXXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVHQ 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+ Q
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIRQ 180
Query: 181 KQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQA 240
K L+GSV MLLDAGVPEA VM+FLFYQPRMFTM LDRFREILEDVKKMGFDPSKSSFVQA
Sbjct: 181 KYLSGSVTMLLDAGVPEALVMYFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFVQA 240
Query: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300
V A+R MSKSTWVRKLGI+KRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW
Sbjct: 241 VHAMRGMSKSTWVRKLGIFKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300
Query: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQKFVH 360
ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTM LVKPYMYTETQFLQKFVH
Sbjct: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTM-LVKPYMYTETQFLQKFVH 360
Query: 361 PHLKEAPQLSKLYRENVDGGIINYEI 387
PHLKEAPQLSKLYRENVDGGII+YEI
Sbjct: 361 PHLKEAPQLSKLYRENVDGGIIDYEI 385
BLAST of Carg15965-RA vs. NCBI nr
Match:
XP_023000245.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 353/381 (92.65%), Postives = 360/381 (94.49%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVASDSHSFTVSYLINSCSLSPESA 60
MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTV+SDSHSFTVSYLINSCSLSPESA
Sbjct: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVSSDSHSFTVSYLINSCSLSPESA 60
Query: 61 SSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLXXXXX 120
SSASKLVSF SPEKPDLVISFFKNHGFSIA+ISFII KYPRILLSNPNG LLP+LXXXXX
Sbjct: 61 SSASKLVSFISPEKPDLVISFFKNHGFSIAHISFIIGKYPRILLSNPNGALLPRLXXXXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVHQ 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
Query: 181 KQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQA 240
GSVRMLLDAGVPEA VM+FLFYQPRMFTM LDRFREILEDVKKMGFDPSKSSF+QA
Sbjct: 181 XXXXGSVRMLLDAGVPEAHVMYFLFYQPRMFTMALDRFREILEDVKKMGFDPSKSSFIQA 240
Query: 241 VFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLGW 300
V AIR MSKSTWVRKLGIYKRWGLSEE+ILAAFRSHPWCMTLSEEKIMLAMDFFV KLGW
Sbjct: 241 VHAIRGMSKSTWVRKLGIYKRWGLSEEEILAAFRSHPWCMTLSEEKIMLAMDFFVKKLGW 300
Query: 301 ETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQKFVH 360
ETAAIVRSP+LLSFSLKKRTIPRASVLLFLFQKGLT KKTM LVKPYMYTETQFLQKFV
Sbjct: 301 ETAAIVRSPVLLSFSLKKRTIPRASVLLFLFQKGLTTKKTM-LVKPYMYTETQFLQKFVR 360
Query: 361 PHLKEAPQLSKLYRENVDGGI 382
PHLKEAPQLSKLYR NVDGGI
Sbjct: 361 PHLKEAPQLSKLYRINVDGGI 380
BLAST of Carg15965-RA vs. NCBI nr
Match:
XP_022138367.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Momordica charantia])
HSP 1 Score: 484.6 bits (1246), Expect = 3.2e-133
Identity = 321/382 (84.03%), Postives = 342/382 (89.53%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVA-SDSHSFTVSYLINSCSLSPES 60
MSNFLCKTL++VRHL T SPYP LRCVQ LH +Y+T A SDSHSFTVSYL+NSCS SPES
Sbjct: 1 MSNFLCKTLIRVRHLLTNSPYPNLRCVQFLHVSYTTAAVSDSHSFTVSYLVNSCSFSPES 60
Query: 61 ASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLXXXX 120
A SASKLVSF + +KPD VISFFKN GFS +IS II KYPR+LLS+PN TLLPK XXXX
Sbjct: 61 ALSASKLVSFDARDKPDSVISFFKNRGFSNIHISLIIGKYPRLLLSDPNKTLLPKXXXXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVH 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AD
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADFR 180
Query: 181 QKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQ 240
Q QLNGS+RMLLDAGVPEA VM+FL YQPRMFTM LDRFREILEDV KMGFDP KSSFVQ
Sbjct: 181 QNQLNGSIRMLLDAGVPEANVMYFLLYQPRMFTMDLDRFREILEDVMKMGFDPLKSSFVQ 240
Query: 241 AVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLG 300
AV AIRAMSKSTW RKL IYKRWGLSE++I+AAFRSHPWCMTLSEEKIML MDFFVNKLG
Sbjct: 241 AVHAIRAMSKSTWERKLNIYKRWGLSEKEIIAAFRSHPWCMTLSEEKIMLGMDFFVNKLG 300
Query: 301 WETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQKFV 360
WE+AA+V+SP+LLSFSLKKRTIPRASVLLFLF+KGLTKKK M LVKPYMYTE QFLQKFV
Sbjct: 301 WESAAVVKSPVLLSFSLKKRTIPRASVLLFLFEKGLTKKKFM-LVKPYMYTELQFLQKFV 360
Query: 361 HPHLKEAPQLSKLYRENVDGGI 382
PHL+E PQLSKLY NVD GI
Sbjct: 361 RPHLEEVPQLSKLYHVNVDDGI 381
BLAST of Carg15965-RA vs. TAIR10
Match:
AT5G07900.1 (Mitochondrial transcription termination factor family protein)
HSP 1 Score: 169.1 bits (427), Expect = 5.4e-42
Identity = 151/335 (45.07%), Postives = 202/335 (60.30%), Query Frame = 0
Query: 43 SFTVSYLINSCSLSPESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRI 102
SFT++YLI+SC LSP+SA+ AS+ + SPE+P+ V++ ++HGF+ A IS ++ K P +
Sbjct: 69 SFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 128
Query: 103 LLSNPNGTLLPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
LL+N LLPKL XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 129 LLANAESVLLPKLSFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
Query: 163 XXXXXXXXXXXXXADVHQKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREIL 222
XXXXXXXXXXXXX + + GVPE + L + P F+ I
Sbjct: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 248
Query: 223 EDVKKMGFDPSKSSFVQAVFAIRAM-SKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMT 282
+ ++MGF+P KS+FV A+ A+ +KS W + +Y+RWG SE+ I+ AF+ HP CM
Sbjct: 249 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 308
Query: 283 LSEEKIMLAMDFFVNKLGWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKK-- 342
LSE KI M++FVN++ +I + P++L FSL+KR IPR SV L GL K+
Sbjct: 309 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 368
Query: 343 -TMLLVKPYMYTETQFLQKFVHPHLKEAPQLSKLY 374
T LLV E FL+K V + +E P+L LY
Sbjct: 369 LTSLLVP----VEKVFLEKLVIKYEEELPELMNLY 399
BLAST of Carg15965-RA vs. TAIR10
Match:
AT1G21150.1 (Mitochondrial transcription termination factor family protein)
HSP 1 Score: 152.5 bits (384), Expect = 5.2e-37
Identity = 129/334 (38.62%), Postives = 183/334 (54.79%), Query Frame = 0
Query: 43 SFTVSYLINSCSLSPESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRI 102
SFTVSYL++SC LS ESA S S+ V S +KPD V++ FK+HGF+ I+ +I +PR+
Sbjct: 56 SFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRV 115
Query: 103 LLSNPNGTLLPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
L +P + PK XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 116 LSLSPEDVISPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKRLIPCYDSLKSILVEEE 175
Query: 163 XXXXXXXXXXXXXADVHQKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREIL 222
+ ++ V + + GVP+ + + + P F RF E+L
Sbjct: 176 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 235
Query: 223 EDVKKMGFDPSKSSFVQAVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTL 282
V GFDP K+ FV A+ A S+S RK +++ +G S+E +AA P C+T+
Sbjct: 236 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 295
Query: 283 SEEKIMLAMDFFVNKLGWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTML 342
S+EKIM +++ VN +G + IV P++LS S++KR PR V+ L KGL KK+ +
Sbjct: 296 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 355
Query: 343 LVKPYMYTETQFLQKFVHPHLKEAPQLSKLYREN 377
++F+ KFV + E PQL + + N
Sbjct: 356 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389
BLAST of Carg15965-RA vs. TAIR10
Match:
AT1G61980.1 (Mitochondrial transcription termination factor family protein)
HSP 1 Score: 114.0 bits (284), Expect = 2.1e-25
Identity = 133/361 (36.84%), Postives = 193/361 (53.46%), Query Frame = 0
Query: 37 VASDSHSFTVSYLINSCSLSPESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFII 96
V SFTVSYL++S L + A S S+ VSF + PD V++ ++HGF+ + IS I+
Sbjct: 46 VGRKGKSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIV 105
Query: 97 WKYPRILLSNPNGTLLPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 156
YP++L+++ +L PK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 106 TDYPQLLVADAEKSLAPK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 165
Query: 157 XXXXXXXXXXXXXXXXXXXADVHQKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLD 216
++ K N SV L + G+P +++F L + +
Sbjct: 166 ETLLDKSSKSEKSCQPFPQGNLENKIRNLSV--LRELGMPH-KLLFPLLISCDVPVFGKE 225
Query: 217 RFREILEDVKKMGFDPSKSSFVQAVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSH 276
+F E L+ V +MGFDPS S FV+A+ ++ +S K+ YKR G E + F+
Sbjct: 226 KFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRW 285
Query: 277 PWCMTLSEEKIMLAM-----------------------------------DFFVNKLGWE 336
P +T SE+KI+ + +F V K+ W
Sbjct: 286 PNFLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWP 345
Query: 337 TAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQKFVHP 363
A+V +P +L +SL+KRT+PR +V+ L KGL + + + ++ T+ FL ++V
Sbjct: 346 LKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKR 402
BLAST of Carg15965-RA vs. TAIR10
Match:
AT1G61970.1 (Mitochondrial transcription termination factor family protein)
HSP 1 Score: 109.0 bits (271), Expect = 6.6e-24
Identity = 132/378 (34.92%), Postives = 195/378 (51.59%), Query Frame = 0
Query: 37 VASDSHSFTVSYLINSCSLSPESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFII 96
V ++FTVSYL++S L+ + A S S+ VSF PD V++ +HGF+ + IS II
Sbjct: 46 VGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTII 105
Query: 97 WKYPRILLSNPNGTLLPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 156
YP++L+++ +L PK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 106 RDYPQLLIADAEKSLGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKD 165
Query: 157 XXXXXXXXXXXXXXXXXXXADVHQKQLNGSVR---MLLDAGVPEARVMFFLFYQPRMFTM 216
+ Q L +R +L + G+P +++F L
Sbjct: 166 TLLEKSSKNEKLCH------SLPQGNLENKIRNVSVLRELGMPH-KLLFSLLISDSQPVC 225
Query: 217 TLDRFREILEDVKKMGFDPSKSSFVQAVFAIRAMSKSTWVRKLGIY-------------- 276
++F E L+ V +MGFDP+ S FV+A+ I M++ T K+ +Y
Sbjct: 226 GKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSF 285
Query: 277 KRW---------------------GLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKL 336
K+W G S ++ + P C+ LS E + +F V K+
Sbjct: 286 KKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKM 345
Query: 337 GWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQKF 375
W A+V +P + +SL+KR +PR +V+ L KGL + + + M T+ FL ++
Sbjct: 346 NWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRY 405
BLAST of Carg15965-RA vs. TAIR10
Match:
AT1G62120.1 (Mitochondrial transcription termination factor family protein)
HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20
Identity = 87/374 (23.26%), Postives = 149/374 (39.84%), Query Frame = 0
Query: 32 FNYSTVASD--------SHSFTVSYLINSCSLSPESASSASKLVSFTSPEKPDLVISFFK 91
F+ S +A+D H+FTVSYL++S L+ + A S S VSF + PD V+S +
Sbjct: 37 FSSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLR 96
Query: 92 NHGFSIANISFIIWKYPRILLSNPNGTLLPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 151
+HGF+ + IS II +PR+L+ + +L PKL
Sbjct: 97 SHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRK 156
Query: 152 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVHQKQLNGSVRMLLDAGVPEARVMFF 211
+ ++ ++ +L + GVP+ R++F
Sbjct: 157 GKSLSRYYDFVKVIIEADKSSKLEKLCHSLPEGSKQENKIR-NLLVLREMGVPQ-RLLFS 216
Query: 212 LFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQAVFAIRAMSKSTWVRKLGIYKRWG 271
L ++F+E L+ ++GFDP+ ++FV+A+ + +S K KR G
Sbjct: 217 LLISDAGDVCGKEKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLG 276
Query: 272 LSEEQILAAFRSHPWCMT-----------------------------------LSEEKIM 331
L+ + + A F+ P +T +
Sbjct: 277 LAVDDVWAMFKKWPNILTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMK 336
Query: 332 LAMDFFVNKLGWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYM 363
+F V ++ W A+ P +L +SL+KRT+PR +V+ L KGL + + +
Sbjct: 337 TKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLT 396
BLAST of Carg15965-RA vs. Swiss-Prot
Match:
sp|Q9FK23|MTEF8_ARATH (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)
HSP 1 Score: 50.1 bits (118), Expect = 6.6e-05
Identity = 30/140 (21.43%), Postives = 59/140 (42.14%), Query Frame = 0
Query: 180 QKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSSFVQ 239
+++L + L + G + FL P + ++ + L + K+G+
Sbjct: 320 ERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAF 379
Query: 240 AVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVNKLG 299
A+ A+ S R +G+Y +GLS E ILA HP + + + +++ + +G
Sbjct: 380 AMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMG 439
Query: 300 WETAAIVRSPLLLSFSLKKR 320
E ++ P L + L R
Sbjct: 440 REVEELLAFPAFLGYKLDSR 459
BLAST of Carg15965-RA vs. TrEMBL
Match:
tr|A0A2R6P4C5|A0A2R6P4C5_ACTCH (Transcription termination factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33119 PE=4 SV=1)
HSP 1 Score: 264.6 bits (675), Expect = 3.4e-67
Identity = 192/382 (50.26%), Postives = 251/382 (65.71%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVAS----DSHSFTVSYLINSCSLS 60
M F+CKTL V ++ SP L +Q F+ S + + HSFTV YLINS S
Sbjct: 1 MFKFICKTLHHVPR-SSQSPNQNLCFLQIQPFSSSLKTTKNLQNQHSFTVIYLINSFGFS 60
Query: 61 PESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLX 120
PE A S SK V F SP+KPD V++FFKNHGF+ IS II +P +LL +P TLLPK X
Sbjct: 61 PEKALSKSKYVKFESPDKPDFVLAFFKNHGFTQTQISTIITNHPSLLLCDPEKTLLPKXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLQSEEKTITAMKRKCGPVL 180
Query: 181 DVHQKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSS 240
Q + ++ +L + GVP A + L QPR F + DRFR+++E+V+ MGFDP +S+
Sbjct: 181 FGKQTLVTPNIEILRETGVPNANITILLMKQPRAFMTSSDRFRQVVEEVENMGFDPLRSN 240
Query: 241 FVQAVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVN 300
FV A++A+R M++STW +K+ +YKRWG +E+ IL AF+ HPWCM +SE+KI AMDF VN
Sbjct: 241 FVMAIYALRTMTRSTWEKKVEVYKRWGWTEDDILEAFKKHPWCMMISEDKISAAMDFLVN 300
Query: 301 KLGWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQ 360
K+G + + + ++P+LLSFSLKKR +PR++V L KGL K ++ L + E FL+
Sbjct: 301 KMGAKISLVAQTPVLLSFSLKKRIVPRSAVYQMLLSKGLIKSNSISLTSLLIPPEKWFLE 360
Query: 361 KFVHPHLKEAPQLSKLYRENVD 379
K V+ H EAP+L KLY+E +D
Sbjct: 361 KLVNRHKDEAPELLKLYKEKLD 381
BLAST of Carg15965-RA vs. TrEMBL
Match:
tr|A0A2R6Q3P9|A0A2R6Q3P9_ACTCH (Transcription termination factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc22853 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 9.4e-65
Identity = 204/381 (53.54%), Postives = 259/381 (67.98%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTV----ASDSHSFTVSYLINSCSLS 60
M F+CKTL VR SP L +Q F+ S + + HSFTVSYLINSC S
Sbjct: 1 MFQFICKTLHHVRSDARASPIHNLCFMQIQLFSSSLKPTKNSPNQHSFTVSYLINSCGFS 60
Query: 61 PESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLX 120
PE A S SK V F SP+KPD V++FFK HGF+ IS II +P +LL +P TLLPK X
Sbjct: 61 PEKALSMSKYVKFESPDKPDSVLAFFKYHGFTQTQISTIIRNHPSLLLCDPEKTLLPKXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKRCGSLLL 180
Query: 181 DVHQKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSS 240
Q + ++ ++ +AGVP + +MF L QPR+F D+FR+IL+DV+ MGFDP +
Sbjct: 181 FDRQPHVIPNIEIMREAGVPNSNIMFLLKNQPRVFITRSDKFRQILKDVETMGFDPLIMT 240
Query: 241 FVQAVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVN 300
FV AV A+R+M+KSTW +K+ +YK+WG +EE+IL AF+ HP CMT SE+KI MDF VN
Sbjct: 241 FVSAVHALRSMTKSTWEKKVDVYKKWGWTEEEILVAFKKHPCCMTASEDKINGVMDFLVN 300
Query: 301 KLGWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQ 360
K+G E++ +V+ +L+S SL+KR +PR +V L KGL + L+ +E FL+
Sbjct: 301 KMGLESSLVVKRSILISLSLEKRIVPRCAVYQALLSKGLIQTNGFSLMTMLRTSEKLFLK 360
Query: 361 KFVHPHLKEAPQLSKLYRENV 378
KFV+ H +EAP+L KLY E +
Sbjct: 361 KFVNYHEEEAPELLKLYNEKL 381
BLAST of Carg15965-RA vs. TrEMBL
Match:
tr|A0A2R6P4D3|A0A2R6P4D3_ACTCH (Transcription termination factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33129 PE=4 SV=1)
HSP 1 Score: 252.3 bits (643), Expect = 1.8e-63
Identity = 185/382 (48.43%), Postives = 246/382 (64.40%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVAS----DSHSFTVSYLINSCSLS 60
M F CK V H + SP +Q F+ S ++ + HSF V+YLINSC S
Sbjct: 1 MFKFTCKAFDYV-HRASQSPNHNFCFLQIQAFSSSLKSTQKPPNQHSFAVTYLINSCGFS 60
Query: 61 PESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLX 120
PE A SASK V F +PEKPD V++FF++HG + IS +I +PR+LL +P TLLPK X
Sbjct: 61 PEKAHSASKYVKFETPEKPDSVLAFFRSHGLTQTQISNVIRTHPRLLLCDPEKTLLPKXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNLLQSEEKTLAAIKSYSGLLL 180
Query: 181 DVHQKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSS 240
Q + ++ L +AGVP A +MF L QPR F DRFR+++++V+ MGF+P + +
Sbjct: 181 FDRQTHVIPNIETLREAGVPNANIMFLLTNQPRAFMTGSDRFRQVVKEVETMGFNPLRIN 240
Query: 241 FVQAVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVN 300
FV AV A+RAM+KSTW +K+ +Y++WG +E++IL AF+ HPWCMT SE+KI MDF VN
Sbjct: 241 FVTAVHALRAMAKSTWEKKVDVYRKWGWTEDEILVAFKKHPWCMTASEDKINGVMDFLVN 300
Query: 301 KLGWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQ 360
K+G E++ + R P L+S SL+KRT+PR +V L KGL + L+ M +E FL+
Sbjct: 301 KMGLESSLVARRPKLISLSLEKRTVPRCAVYQVLLSKGLISSNAISLMTLLMTSEKLFLE 360
Query: 361 KFVHPHLKEAPQLSKLYRENVD 379
K V+ H +EAP+L +LY+ +D
Sbjct: 361 KLVNRHKEEAPELLQLYKGKLD 381
BLAST of Carg15965-RA vs. TrEMBL
Match:
tr|A0A2R6P4E0|A0A2R6P4E0_ACTCH (Transcription termination factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33130 PE=4 SV=1)
HSP 1 Score: 252.3 bits (643), Expect = 1.8e-63
Identity = 148/383 (38.64%), Postives = 210/383 (54.83%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLR-CVQSLHFNYSTVAS-----DSHSFTVSYLINSCS 60
M F+CKT +R T ++ P C +H S++ S + HSFTV+YLINSC
Sbjct: 1 MFKFICKTSHHLRSATRVAQSPTHNLCFCQIHPFSSSLESIKNSPNQHSFTVNYLINSCG 60
Query: 61 LSPESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPK 120
SPE + SASK V F +P+KPD V+ FF+ H F+ IS II K PR+L+ +P TLLPK
Sbjct: 61 FSPEKSLSASKYVKFETPDKPDSVLRFFETHEFTKTQISRIIRKLPRLLVCDPESTLLPK 120
Query: 121 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
L
Sbjct: 121 LEFLKSKGISSTDVAKMVSISPFFMKRSLENKIIPSFILFTSLFRSEEKTITAIKRCPSL 180
Query: 181 XADVHQKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSK 240
+ ++ L +A VP A +M+ L QPR+F + +RFREI+++V+ MGF+P K
Sbjct: 181 LLHDQHFTVAPNIENLQEANVPIANIMYLLANQPRVFFASSNRFREIVKEVETMGFNPLK 240
Query: 241 SSFVQAVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFF 300
SFV AV A+R+M+KS W +K +YK WG +E++IL AFR HPWCMT+SE+KI M+F+
Sbjct: 241 LSFVTAVHALRSMTKSIWEKKFDVYKNWGWTEDEILKAFRMHPWCMTVSEDKINRVMEFW 300
Query: 301 VNKLGWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQF 360
VNK+GW+++ + R P LLS SL+KR +PR +V + KGL K K + L++ E F
Sbjct: 301 VNKMGWKSSLLARRPKLLSQSLEKRIVPRCAVYQIMLSKGLIKSKGISLMRLVEAPEEWF 360
Query: 361 LQKFVHPHLKEAPQLSKLYRENV 378
L+K V+ H + AP+L KLY+E +
Sbjct: 361 LEKLVNRHEEAAPELLKLYKEKL 383
BLAST of Carg15965-RA vs. TrEMBL
Match:
tr|A0A2R6Q3R3|A0A2R6Q3R3_ACTCH (Transcription termination factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc22852 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 3.9e-63
Identity = 190/382 (49.74%), Postives = 246/382 (64.40%), Query Frame = 0
Query: 1 MSNFLCKTLLQVRHLTTISPYPKLRCVQSLHFNYSTVAS----DSHSFTVSYLINSCSLS 60
M F+CK+ R + SP L Q F+ S ++ + HS+ V+YLINSC S
Sbjct: 1 MFKFMCKSSHHFRFASIASPTHNLYFFQIQPFSSSLESNKNSPNQHSYAVTYLINSCGFS 60
Query: 61 PESASSASKLVSFTSPEKPDLVISFFKNHGFSIANISFIIWKYPRILLSNPNGTLLPKLX 120
PE A SASK V F +P+KPD V+ FFKNHGF+ +IS I+ +P +LLS+P TLLPK X
Sbjct: 61 PEKALSASKYVKFETPDKPDSVLEFFKNHGFTQTHISTIVRTFPPVLLSDPEKTLLPKXX 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 180
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQSEERTLAAIKRSDALLL 180
Query: 181 DVHQKQLNGSVRMLLDAGVPEARVMFFLFYQPRMFTMTLDRFREILEDVKKMGFDPSKSS 240
HQ + +V +L +AGV A + F L +PR F + DRFRE++++V+ MGF+PS +
Sbjct: 181 FDHQTHVTHNVEILREAGVSNANITFSLTNEPRAFMTSSDRFREVVKEVETMGFNPSSIN 240
Query: 241 FVQAVFAIRAMSKSTWVRKLGIYKRWGLSEEQILAAFRSHPWCMTLSEEKIMLAMDFFVN 300
FV AV R MSKSTW +K+ IYK+WG SE++IL AF+ PWCM S++KI MDF VN
Sbjct: 241 FVLAVQFFRGMSKSTWEKKIEIYKKWGWSEDEILGAFKMRPWCMMASDDKITGVMDFLVN 300
Query: 301 KLGWETAAIVRSPLLLSFSLKKRTIPRASVLLFLFQKGLTKKKTMLLVKPYMYTETQFLQ 360
K+G + + + R P L+S SL+KR +PR++V L KGL K + L E FL+
Sbjct: 301 KMGLDASLVARRPKLISLSLEKRIVPRSAVYQVLLSKGLIKSDGISLATVLEPPEKWFLE 360
Query: 361 KFVHPHLKEAPQLSKLYRENVD 379
K V+ H +EAP+L KLY+E +D
Sbjct: 361 KIVNRHKEEAPELLKLYQEKLD 382
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022930344.1 | 2.5e-170 | 98.70 | transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucur... | [more] |
XP_023514950.1 | 1.7e-163 | 96.11 | transcription termination factor MTERF6, chloroplastic/mitochondrial-like isofor... | [more] |
XP_022930343.1 | 4.0e-160 | 94.82 | transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucur... | [more] |
XP_023000245.1 | 1.5e-151 | 92.65 | transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucur... | [more] |
XP_022138367.1 | 3.2e-133 | 84.03 | transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Momor... | [more] |
Match Name | E-value | Identity | Description | |
AT5G07900.1 | 5.4e-42 | 45.07 | Mitochondrial transcription termination factor family protein | [more] |
AT1G21150.1 | 5.2e-37 | 38.62 | Mitochondrial transcription termination factor family protein | [more] |
AT1G61980.1 | 2.1e-25 | 36.84 | Mitochondrial transcription termination factor family protein | [more] |
AT1G61970.1 | 6.6e-24 | 34.92 | Mitochondrial transcription termination factor family protein | [more] |
AT1G62120.1 | 1.5e-20 | 23.26 | Mitochondrial transcription termination factor family protein | [more] |
Match Name | E-value | Identity | Description | |
sp|Q9FK23|MTEF8_ARATH | 6.6e-05 | 21.43 | Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O... | [more] |