Carg15345-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15345-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	Cucurbita_argyrosperma_scaffold_085 : 444819 .. 445301 (-)
Sequence length	483

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACGCCATTCGATGCTGCATCTCCTGCATATTCCCATGTGGGTCTCTCGACGTTATCAGAATCGTTCATTGCAACGGCCACGTGGAGGAGATCGCCGGCTCAATCCGGGCCAGTGATATCATGAAGGCCAATCCTAAACACGTCCTCAAAAAACCCTCCTCCCCCTCCGACCACGGTGTGGTCCCCAAGATCGTGATCCTCCCGCCCGACGCCGAGCTCCAACGTGGAAAAATTTACTTTCTCATGCCCCTTCCTCCATCCCCAGAAAAAACCCGGTCCAAGAAGAAGAAGAGGGAAGCACCGGGAACCCATGTCGGTTCGGGTATATCCGTGACGAATTTGGTGGTTTCGGATCGGTACCTGAGTGATATACTGTCCGAGAAATTGTCGACCGGTCAGAAGGATAAACGGCGGGGGCGTGTCGGAGTGTGGAGGCCTCATTTAGAGAGCATTTCCGAGTTCCCACCTGATCTTTAA

mRNA sequence

ATGAAGAACGCCATTCGATGCTGCATCTCCTGCATATTCCCATGTGGGTCTCTCGACGTTATCAGAATCGTTCATTGCAACGGCCACGTGGAGGAGATCGCCGGCTCAATCCGGGCCAGTGATATCATGAAGGCCAATCCTAAACACGTCCTCAAAAAACCCTCCTCCCCCTCCGACCACGGTGTGGTCCCCAAGATCGTGATCCTCCCGCCCGACGCCGAGCTCCAACGTGGAAAAATTTACTTTCTCATGCCCCTTCCTCCATCCCCAGAAAAAACCCGGTCCAAGAAGAAGAAGAGGGAAGCACCGGGAACCCATGTCGGTTCGGGTATATCCGTGACGAATTTGGTGGTTTCGGATCGGTACCTGAGTGATATACTGTCCGAGAAATTGTCGACCGGTCAGAAGGATAAACGGCGGGGGCGTGTCGGAGTGTGGAGGCCTCATTTAGAGAGCATTTCCGAGTTCCCACCTGATCTTTAA

Coding sequence (CDS)

ATGAAGAACGCCATTCGATGCTGCATCTCCTGCATATTCCCATGTGGGTCTCTCGACGTTATCAGAATCGTTCATTGCAACGGCCACGTGGAGGAGATCGCCGGCTCAATCCGGGCCAGTGATATCATGAAGGCCAATCCTAAACACGTCCTCAAAAAACCCTCCTCCCCCTCCGACCACGGTGTGGTCCCCAAGATCGTGATCCTCCCGCCCGACGCCGAGCTCCAACGTGGAAAAATTTACTTTCTCATGCCCCTTCCTCCATCCCCAGAAAAAACCCGGTCCAAGAAGAAGAAGAGGGAAGCACCGGGAACCCATGTCGGTTCGGGTATATCCGTGACGAATTTGGTGGTTTCGGATCGGTACCTGAGTGATATACTGTCCGAGAAATTGTCGACCGGTCAGAAGGATAAACGGCGGGGGCGTGTCGGAGTGTGGAGGCCTCATTTAGAGAGCATTTCCGAGTTCCCACCTGATCTTTAA

Protein sequence

MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDHGVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSKKKKREAPGTHVGSGISVTNLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL

Homology

[Close]

BLAST of Carg15345-RA vs. NCBI nr
Match: XP_022925910.1 (uncharacterized protein LOC111433184 [Cucurbita moschata])

HSP 1 Score: 250.0 bits (637), Expect = 5.5e-63
Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 101

Query: 61  GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLVVSD 120
           GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGT VGSGISVTNLVVSD
Sbjct: 102 GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTDVGSGISVTNLVVSD 161

Query: 121 RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL
Sbjct: 162 RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 201

[Close]

BLAST of Carg15345-RA vs. NCBI nr
Match: XP_022978779.1 (uncharacterized protein LOC111478638 [Cucurbita maxima])

HSP 1 Score: 250.0 bits (637), Expect = 5.5e-63
Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH
Sbjct: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60

Query: 61  GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLVVSD 120
           GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGT VGSGISVTNLVVSD
Sbjct: 61  GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTDVGSGISVTNLVVSD 120

Query: 121 RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL
Sbjct: 121 RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 160

[Close]

BLAST of Carg15345-RA vs. NCBI nr
Match: XP_023543275.1 (uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543276.1 uncharacterized protein LOC111803203 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 147/161 (91.30%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKP+SPSD 
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPTSPSDQ 101

Query: 61  GVVP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLVVS 120
           GVVP        XXXXXXXXXXXXXXXXXXXXXXXXX  KRE PGT VGSGISVTNLVVS
Sbjct: 102 GVVPKIVILPPDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRETPGTDVGSGISVTNLVVS 161

Query: 121 DRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           DRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL
Sbjct: 162 DRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 202

[Close]

BLAST of Carg15345-RA vs. NCBI nr
Match: XP_011658249.1 (PREDICTED: uncharacterized protein LOC101214777 [Cucumis sativus] >KGN49308.1 hypothetical protein Csa_6G519600 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 7.0e-42
Identity = 117/167 (70.06%), Postives = 123/167 (73.65%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 60
           MKNAIRCC+SCI PCGSLDVIRIVHC+GHV+EIAGSIRASD+MKANPKHVLKKPSSP SD
Sbjct: 1   MKNAIRCCLSCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  HGVV------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISV 120
             VV      P               XXXXXXXXXXXXXXXXX                 
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TNLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           TNLVVSDRYLS+ILSEKL+T QKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 121 TNLVVSDRYLSEILSEKLTTVQKDKRRGRVGVWRPHLESISEFPTDL 167

[Close]

BLAST of Carg15345-RA vs. NCBI nr
Match: XP_018807552.1 (PREDICTED: uncharacterized protein LOC108980949 [Juglans regia])

HSP 1 Score: 171.8 bits (434), Expect = 1.9e-39
Identity = 90/163 (55.21%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKN IRCCISCI PCG LDVIRIVH NG VEEI+G+IRAS+IMKA PKHVLKKPSS SD 
Sbjct: 1   MKNTIRCCISCILPCGVLDVIRIVHTNGRVEEISGTIRASEIMKAYPKHVLKKPSSSSDD 60

Query: 61  GVVP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLV 120
           G VP                                   +KKR  P ++  + +++TNL+
Sbjct: 61  GCVPKIVIVPPDAELQRGKIYFLMPVPSNPEKTRSRSSTRKKRREPDSNANNAMAMTNLL 120

Query: 121 VSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           +SD+YL++ILSEK+ST Q+D+RRGRVGVWRPHLESI E P D+
Sbjct: 121 ISDQYLTEILSEKIST-QRDRRRGRVGVWRPHLESICESPSDV 162

[Close]

BLAST of Carg15345-RA vs. TAIR10
Match: AT1G29195.1 (unknown protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 87/189 (46.03%), Postives = 101/189 (53.44%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 60
           MK  IRCCI+CI PCG+LDVIRIVH NGHVEEI+G+I AS+IMKA+PKHVLKKPSSP SD
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  HG-----------VVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK------KKREA 120
           H            +VP                                       KKR  
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 121 PGTHVGSGISVTN----------------LVVSDRYLSDILSEKLSTGQKDKRRGRVGVW 156
                  G    N                L+ SDRYL++ILSEK++T QKD+R+GRVGVW
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILSEKVAT-QKDRRKGRVGVW 180

[Close]

BLAST of Carg15345-RA vs. TAIR10
Match: AT2G30230.1 (unknown protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22
Identity = 64/177 (36.16%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           M N++RCC++C+ PCG+LD+IRIVH NGHV+EI   + A +I++ANP HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCS---Q 60

Query: 61  GVV-------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISV 120
           GVV       P                                +KK    G  + S    
Sbjct: 61  GVVRKILILSPESELKRGSIYFLIPDTSMPEKKKTKKRKELRCRKKPLESGNDINSDHVS 120

Query: 121 TN-------LVVSDRYLSDI-LSEKLSTGQKDKRRGR-------VGVWRPHLESISE 156
           TN       L + ++YL D+ LSEK+S+  K+ R  R       V  WRPHL+SI+E
Sbjct: 121 TNKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDSITE 174

[Close]

BLAST of Carg15345-RA vs. TAIR10
Match: AT1G06980.1 (unknown protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 60/170 (35.29%), Postives = 81/170 (47.65%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           M N++RCC++C+ PCG+LD+IRIVH NG+VEEI  SI A +I++ANP HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCS---Q 60

Query: 61  GVV-------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISV 120
           GVV       P                                K  +       G  I  
Sbjct: 61  GVVRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKG 120

Query: 121 TNLVVS--DRYLSDILSEKLSTGQKDKRRGR------VGVWRPHLESISE 156
               V   ++YL +++S   STG++ + R R      V  WRP L+SISE
Sbjct: 121 DEECVKLCEKYLEEVVS-SASTGKEHRHRRRHSRSASVSTWRPLLDSISE 166

[Close]

BLAST of Carg15345-RA vs. TrEMBL
Match: tr|A0A0A0KI99|A0A0A0KI99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.6e-42
Identity = 117/167 (70.06%), Postives = 123/167 (73.65%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 60
           MKNAIRCC+SCI PCGSLDVIRIVHC+GHV+EIAGSIRASD+MKANPKHVLKKPSSP SD
Sbjct: 1   MKNAIRCCLSCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  HGVV------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISV 120
             VV      P               XXXXXXXXXXXXXXXXX                 
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TNLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           TNLVVSDRYLS+ILSEKL+T QKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 121 TNLVVSDRYLSEILSEKLTTVQKDKRRGRVGVWRPHLESISEFPTDL 167

[Close]

BLAST of Carg15345-RA vs. TrEMBL
Match: tr|A0A2I4DK90|A0A2I4DK90_9ROSI (uncharacterized protein LOC108980949 OS=Juglans regia OX=51240 GN=LOC108980949 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 90/163 (55.21%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKN IRCCISCI PCG LDVIRIVH NG VEEI+G+IRAS+IMKA PKHVLKKPSS SD 
Sbjct: 1   MKNTIRCCISCILPCGVLDVIRIVHTNGRVEEISGTIRASEIMKAYPKHVLKKPSSSSDD 60

Query: 61  GVVP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLV 120
           G VP                                   +KKR  P ++  + +++TNL+
Sbjct: 61  GCVPKIVIVPPDAELQRGKIYFLMPVPSNPEKTRSRSSTRKKRREPDSNANNAMAMTNLL 120

Query: 121 VSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           +SD+YL++ILSEK+ST Q+D+RRGRVGVWRPHLESI E P D+
Sbjct: 121 ISDQYLTEILSEKIST-QRDRRRGRVGVWRPHLESICESPSDV 162

[Close]

BLAST of Carg15345-RA vs. TrEMBL
Match: tr|A0A1Q3BIW4|A0A1Q3BIW4_CEPFO (DUF4228 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_11489 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-38
Identity = 92/169 (54.44%), Postives = 110/169 (65.09%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKN IRCCISCI PCG+LDVIRIVH NG VEEI+G+I AS+IMKA+PKHVLKKPSS SD 
Sbjct: 14  MKNTIRCCISCILPCGALDVIRIVHSNGRVEEISGTITASEIMKAHPKHVLKKPSSSSDD 73

Query: 61  GVVP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGS------- 120
           G+VP                                    +K+R    T++ +       
Sbjct: 74  GMVPKIVIVPPDAELQRGKIYFLMPVPSSKPVKDRSRSSTRKRRSETHTNISNMNVSKAD 133

Query: 121 -GISVTNLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFP 158
             IS+TNL+VSDRYLS+ILSEK+ST Q+D+RRGR+GVWRPHLESISE P
Sbjct: 134 HSISMTNLLVSDRYLSEILSEKIST-QRDRRRGRIGVWRPHLESISETP 181

[Close]

BLAST of Carg15345-RA vs. TrEMBL
Match: tr|A0A059CCC6|A0A059CCC6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D00486 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.8e-37
Identity = 90/162 (55.56%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKP-SSPSD 60
           MKN +RCCISCI PCG+LDVIRIVH NG VEEI+G++RA +IMK +PKHVLKKP SSPS+
Sbjct: 1   MKNTLRCCISCILPCGALDVIRIVHTNGRVEEISGTVRAGEIMKLHPKHVLKKPSSSPSE 60

Query: 61  HGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-----KKREAPGTHVGSGISVT 120
           +GVVP                                      KKRE+ G+   S I++T
Sbjct: 61  NGVVPKIVIVPPDAELQRGKIYFLMPVPSMPEKTRSRSSSRKIKKRESEGSDAKSAIAMT 120

Query: 121 -NLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISE 156
            NL++SDRYLS+ILSEKLST Q+D+RRGR  VWRPHLESISE
Sbjct: 121 ANLLISDRYLSEILSEKLST-QRDRRRGRAAVWRPHLESISE 161

[Close]

BLAST of Carg15345-RA vs. TrEMBL
Match: tr|A0A2G9HPY1|A0A2G9HPY1_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07748 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.6e-37
Identity = 88/158 (55.70%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSD- 60
           M+NAIRCCISCI PCG+LDVIRIVH NGHVEEI+G+++A++IMK +PKHVLK PSSPS  
Sbjct: 1   MRNAIRCCISCILPCGALDVIRIVHANGHVEEISGTVKAAEIMKLHPKHVLKMPSSPSSA 60

Query: 61  HGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLVVS 120
            GV P                                 K   A        ISVTNL++S
Sbjct: 61  EGVCPKIVVVPPDAELQRGKIYFLMPLPPRNKKESDNIKNTTAKS---NGNISVTNLLIS 120

Query: 121 DRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFP 158
           DRYLS+ILSEK+S+ Q+D+RRGRVGVWRPHLESISE P
Sbjct: 121 DRYLSEILSEKVSS-QRDRRRGRVGVWRPHLESISETP 154

The following BLAST results are available for this feature:

BLAST of Carg15345-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925910.1	5.5e-63	99.38	uncharacterized protein LOC111433184 [Cucurbita moschata]	[more]
XP_022978779.1	5.5e-63	99.38	uncharacterized protein LOC111478638 [Cucurbita maxima]	[more]
XP_023543275.1	1.8e-58	91.30	uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_011658249.1	7.0e-42	70.06	PREDICTED: uncharacterized protein LOC101214777 [Cucumis sativus] >KGN49308.1 hy...	[more]
XP_018807552.1	1.9e-39	55.21	PREDICTED: uncharacterized protein LOC108980949 [Juglans regia]	[more]

BLAST of Carg15345-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G29195.1	1.2e-32	46.03	unknown protein	[more]
AT2G30230.1	2.0e-22	36.16	unknown protein	[more]
AT1G06980.1	1.7e-18	35.29	unknown protein	[more]

BLAST of Carg15345-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15345-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KI99\|A0A0A0KI99_CUCSA	4.6e-42	70.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1	[more]
tr\|A0A2I4DK90\|A0A2I4DK90_9ROSI	1.3e-39	55.21	uncharacterized protein LOC108980949 OS=Juglans regia OX=51240 GN=LOC108980949 P...	[more]
tr\|A0A1Q3BIW4\|A0A1Q3BIW4_CEPFO	3.1e-38	54.44	DUF4228 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_...	[more]
tr\|A0A059CCC6\|A0A059CCC6_EUCGR	5.8e-37	55.56	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D00486 PE=4 SV...	[more]
tr\|A0A2G9HPY1\|A0A2G9HPY1_9LAMI	7.6e-37	55.70	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07748 P...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg15345	Carg15345	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15345-RA.CDS.1	Carg15345-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15345-RA.exon.1	Carg15345-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg15345-RA	Carg15345-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 3..155 e-value: 6.3E-32 score: 111.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..108
None	No IPR available	PANTHER	PTHR33052:SF26	SUBFAMILY NOT NAMED	coord: 1..155
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 1..155