Carg15345 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15345
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	Cucurbita_argyrosperma_scaffold_085 : 444819 .. 445301 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACGCCATTCGATGCTGCATCTCCTGCATATTCCCATGTGGGTCTCTCGACGTTATCAGAATCGTTCATTGCAACGGCCACGTGGAGGAGATCGCCGGCTCAATCCGGGCCAGTGATATCATGAAGGCCAATCCTAAACACGTCCTCAAAAAACCCTCCTCCCCCTCCGACCACGGTGTGGTCCCCAAGATCGTGATCCTCCCGCCCGACGCCGAGCTCCAACGTGGAAAAATTTACTTTCTCATGCCCCTTCCTCCATCCCCAGAAAAAACCCGGTCCAAGAAGAAGAAGAGGGAAGCACCGGGAACCCATGTCGGTTCGGGTATATCCGTGACGAATTTGGTGGTTTCGGATCGGTACCTGAGTGATATACTGTCCGAGAAATTGTCGACCGGTCAGAAGGATAAACGGCGGGGGCGTGTCGGAGTGTGGAGGCCTCATTTAGAGAGCATTTCCGAGTTCCCACCTGATCTTTAA

mRNA sequence

ATGAAGAACGCCATTCGATGCTGCATCTCCTGCATATTCCCATGTGGGTCTCTCGACGTTATCAGAATCGTTCATTGCAACGGCCACGTGGAGGAGATCGCCGGCTCAATCCGGGCCAGTGATATCATGAAGGCCAATCCTAAACACGTCCTCAAAAAACCCTCCTCCCCCTCCGACCACGGTGTGGTCCCCAAGATCGTGATCCTCCCGCCCGACGCCGAGCTCCAACGTGGAAAAATTTACTTTCTCATGCCCCTTCCTCCATCCCCAGAAAAAACCCGGTCCAAGAAGAAGAAGAGGGAAGCACCGGGAACCCATGTCGGTTCGGGTATATCCGTGACGAATTTGGTGGTTTCGGATCGGTACCTGAGTGATATACTGTCCGAGAAATTGTCGACCGGTCAGAAGGATAAACGGCGGGGGCGTGTCGGAGTGTGGAGGCCTCATTTAGAGAGCATTTCCGAGTTCCCACCTGATCTTTAA

Coding sequence (CDS)

ATGAAGAACGCCATTCGATGCTGCATCTCCTGCATATTCCCATGTGGGTCTCTCGACGTTATCAGAATCGTTCATTGCAACGGCCACGTGGAGGAGATCGCCGGCTCAATCCGGGCCAGTGATATCATGAAGGCCAATCCTAAACACGTCCTCAAAAAACCCTCCTCCCCCTCCGACCACGGTGTGGTCCCCAAGATCGTGATCCTCCCGCCCGACGCCGAGCTCCAACGTGGAAAAATTTACTTTCTCATGCCCCTTCCTCCATCCCCAGAAAAAACCCGGTCCAAGAAGAAGAAGAGGGAAGCACCGGGAACCCATGTCGGTTCGGGTATATCCGTGACGAATTTGGTGGTTTCGGATCGGTACCTGAGTGATATACTGTCCGAGAAATTGTCGACCGGTCAGAAGGATAAACGGCGGGGGCGTGTCGGAGTGTGGAGGCCTCATTTAGAGAGCATTTCCGAGTTCCCACCTGATCTTTAA

Protein sequence

MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDHGVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSKKKKREAPGTHVGSGISVTNLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL

Homology

[Close]

BLAST of Carg15345 vs. NCBI nr
Match: XP_022925910.1 (uncharacterized protein LOC111433184 [Cucurbita moschata])

HSP 1 Score: 250.0 bits (637), Expect = 5.5e-63
Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 101

Query: 61  GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLVVSD 120
           GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGT VGSGISVTNLVVSD
Sbjct: 102 GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTDVGSGISVTNLVVSD 161

Query: 121 RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL
Sbjct: 162 RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 201

[Close]

BLAST of Carg15345 vs. NCBI nr
Match: XP_022978779.1 (uncharacterized protein LOC111478638 [Cucurbita maxima])

HSP 1 Score: 250.0 bits (637), Expect = 5.5e-63
Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH
Sbjct: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60

Query: 61  GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLVVSD 120
           GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGT VGSGISVTNLVVSD
Sbjct: 61  GVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTDVGSGISVTNLVVSD 120

Query: 121 RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL
Sbjct: 121 RYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 160

[Close]

BLAST of Carg15345 vs. NCBI nr
Match: XP_023543275.1 (uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543276.1 uncharacterized protein LOC111803203 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 147/161 (91.30%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKP+SPSD 
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPTSPSDQ 101

Query: 61  GVVP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLVVS 120
           GVVP        XXXXXXXXXXXXXXXXXXXXXXXXX  KRE PGT VGSGISVTNLVVS
Sbjct: 102 GVVPKIVILPPDXXXXXXXXXXXXXXXXXXXXXXXXXXXKRETPGTDVGSGISVTNLVVS 161

Query: 121 DRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           DRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL
Sbjct: 162 DRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 202

[Close]

BLAST of Carg15345 vs. NCBI nr
Match: XP_011658249.1 (PREDICTED: uncharacterized protein LOC101214777 [Cucumis sativus] >KGN49308.1 hypothetical protein Csa_6G519600 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 7.0e-42
Identity = 117/167 (70.06%), Postives = 123/167 (73.65%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 60
           MKNAIRCC+SCI PCGSLDVIRIVHC+GHV+EIAGSIRASD+MKANPKHVLKKPSSP SD
Sbjct: 1   MKNAIRCCLSCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  HGVV------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISV 120
             VV      P               XXXXXXXXXXXXXXXXX                 
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TNLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           TNLVVSDRYLS+ILSEKL+T QKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 121 TNLVVSDRYLSEILSEKLTTVQKDKRRGRVGVWRPHLESISEFPTDL 167

[Close]

BLAST of Carg15345 vs. NCBI nr
Match: XP_018807552.1 (PREDICTED: uncharacterized protein LOC108980949 [Juglans regia])

HSP 1 Score: 171.8 bits (434), Expect = 1.9e-39
Identity = 90/163 (55.21%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKN IRCCISCI PCG LDVIRIVH NG VEEI+G+IRAS+IMKA PKHVLKKPSS SD 
Sbjct: 1   MKNTIRCCISCILPCGVLDVIRIVHTNGRVEEISGTIRASEIMKAYPKHVLKKPSSSSDD 60

Query: 61  GVVP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLV 120
           G VP                                   +KKR  P ++  + +++TNL+
Sbjct: 61  GCVPKIVIVPPDAELQRGKIYFLMPVPSNPEKTRSRSSTRKKRREPDSNANNAMAMTNLL 120

Query: 121 VSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           +SD+YL++ILSEK+ST Q+D+RRGRVGVWRPHLESI E P D+
Sbjct: 121 ISDQYLTEILSEKIST-QRDRRRGRVGVWRPHLESICESPSDV 162

[Close]

BLAST of Carg15345 vs. TAIR10
Match: AT1G29195.1 (unknown protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 87/189 (46.03%), Postives = 101/189 (53.44%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 60
           MK  IRCCI+CI PCG+LDVIRIVH NGHVEEI+G+I AS+IMKA+PKHVLKKPSSP SD
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  HG-----------VVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK------KKREA 120
           H            +VP                                       KKR  
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 121 PGTHVGSGISVTN----------------LVVSDRYLSDILSEKLSTGQKDKRRGRVGVW 156
                  G    N                L+ SDRYL++ILSEK++T QKD+R+GRVGVW
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILSEKVAT-QKDRRKGRVGVW 180

[Close]

BLAST of Carg15345 vs. TAIR10
Match: AT2G30230.1 (unknown protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22
Identity = 64/177 (36.16%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           M N++RCC++C+ PCG+LD+IRIVH NGHV+EI   + A +I++ANP HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCS---Q 60

Query: 61  GVV-------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISV 120
           GVV       P                                +KK    G  + S    
Sbjct: 61  GVVRKILILSPESELKRGSIYFLIPDTSMPEKKKTKKRKELRCRKKPLESGNDINSDHVS 120

Query: 121 TN-------LVVSDRYLSDI-LSEKLSTGQKDKRRGR-------VGVWRPHLESISE 156
           TN       L + ++YL D+ LSEK+S+  K+ R  R       V  WRPHL+SI+E
Sbjct: 121 TNKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDSITE 174

[Close]

BLAST of Carg15345 vs. TAIR10
Match: AT1G06980.1 (unknown protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 60/170 (35.29%), Postives = 81/170 (47.65%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           M N++RCC++C+ PCG+LD+IRIVH NG+VEEI  SI A +I++ANP HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCS---Q 60

Query: 61  GVV-------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISV 120
           GVV       P                                K  +       G  I  
Sbjct: 61  GVVRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKG 120

Query: 121 TNLVVS--DRYLSDILSEKLSTGQKDKRRGR------VGVWRPHLESISE 156
               V   ++YL +++S   STG++ + R R      V  WRP L+SISE
Sbjct: 121 DEECVKLCEKYLEEVVS-SASTGKEHRHRRRHSRSASVSTWRPLLDSISE 166

[Close]

BLAST of Carg15345 vs. TrEMBL
Match: tr|A0A0A0KI99|A0A0A0KI99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.6e-42
Identity = 117/167 (70.06%), Postives = 123/167 (73.65%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 60
           MKNAIRCC+SCI PCGSLDVIRIVHC+GHV+EIAGSIRASD+MKANPKHVLKKPSSP SD
Sbjct: 1   MKNAIRCCLSCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  HGVV------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISV 120
             VV      P               XXXXXXXXXXXXXXXXX                 
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TNLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           TNLVVSDRYLS+ILSEKL+T QKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 121 TNLVVSDRYLSEILSEKLTTVQKDKRRGRVGVWRPHLESISEFPTDL 167

[Close]

BLAST of Carg15345 vs. TrEMBL
Match: tr|A0A2I4DK90|A0A2I4DK90_9ROSI (uncharacterized protein LOC108980949 OS=Juglans regia OX=51240 GN=LOC108980949 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 90/163 (55.21%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKN IRCCISCI PCG LDVIRIVH NG VEEI+G+IRAS+IMKA PKHVLKKPSS SD 
Sbjct: 1   MKNTIRCCISCILPCGVLDVIRIVHTNGRVEEISGTIRASEIMKAYPKHVLKKPSSSSDD 60

Query: 61  GVVP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLV 120
           G VP                                   +KKR  P ++  + +++TNL+
Sbjct: 61  GCVPKIVIVPPDAELQRGKIYFLMPVPSNPEKTRSRSSTRKKRREPDSNANNAMAMTNLL 120

Query: 121 VSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 161
           +SD+YL++ILSEK+ST Q+D+RRGRVGVWRPHLESI E P D+
Sbjct: 121 ISDQYLTEILSEKIST-QRDRRRGRVGVWRPHLESICESPSDV 162

[Close]

BLAST of Carg15345 vs. TrEMBL
Match: tr|A0A1Q3BIW4|A0A1Q3BIW4_CEPFO (DUF4228 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_11489 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-38
Identity = 92/169 (54.44%), Postives = 110/169 (65.09%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60
           MKN IRCCISCI PCG+LDVIRIVH NG VEEI+G+I AS+IMKA+PKHVLKKPSS SD 
Sbjct: 14  MKNTIRCCISCILPCGALDVIRIVHSNGRVEEISGTITASEIMKAHPKHVLKKPSSSSDD 73

Query: 61  GVVP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGS------- 120
           G+VP                                    +K+R    T++ +       
Sbjct: 74  GMVPKIVIVPPDAELQRGKIYFLMPVPSSKPVKDRSRSSTRKRRSETHTNISNMNVSKAD 133

Query: 121 -GISVTNLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFP 158
             IS+TNL+VSDRYLS+ILSEK+ST Q+D+RRGR+GVWRPHLESISE P
Sbjct: 134 HSISMTNLLVSDRYLSEILSEKIST-QRDRRRGRIGVWRPHLESISETP 181

[Close]

BLAST of Carg15345 vs. TrEMBL
Match: tr|A0A059CCC6|A0A059CCC6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D00486 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.8e-37
Identity = 90/162 (55.56%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKP-SSPSD 60
           MKN +RCCISCI PCG+LDVIRIVH NG VEEI+G++RA +IMK +PKHVLKKP SSPS+
Sbjct: 1   MKNTLRCCISCILPCGALDVIRIVHTNGRVEEISGTVRAGEIMKLHPKHVLKKPSSSPSE 60

Query: 61  HGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-----KKREAPGTHVGSGISVT 120
           +GVVP                                      KKRE+ G+   S I++T
Sbjct: 61  NGVVPKIVIVPPDAELQRGKIYFLMPVPSMPEKTRSRSSSRKIKKRESEGSDAKSAIAMT 120

Query: 121 -NLVVSDRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISE 156
            NL++SDRYLS+ILSEKLST Q+D+RRGR  VWRPHLESISE
Sbjct: 121 ANLLISDRYLSEILSEKLST-QRDRRRGRAAVWRPHLESISE 161

[Close]

BLAST of Carg15345 vs. TrEMBL
Match: tr|A0A2G9HPY1|A0A2G9HPY1_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07748 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.6e-37
Identity = 88/158 (55.70%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSD- 60
           M+NAIRCCISCI PCG+LDVIRIVH NGHVEEI+G+++A++IMK +PKHVLK PSSPS  
Sbjct: 1   MRNAIRCCISCILPCGALDVIRIVHANGHVEEISGTVKAAEIMKLHPKHVLKMPSSPSSA 60

Query: 61  HGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKREAPGTHVGSGISVTNLVVS 120
            GV P                                 K   A        ISVTNL++S
Sbjct: 61  EGVCPKIVVVPPDAELQRGKIYFLMPLPPRNKKESDNIKNTTAKS---NGNISVTNLLIS 120

Query: 121 DRYLSDILSEKLSTGQKDKRRGRVGVWRPHLESISEFP 158
           DRYLS+ILSEK+S+ Q+D+RRGRVGVWRPHLESISE P
Sbjct: 121 DRYLSEILSEKVSS-QRDRRRGRVGVWRPHLESISETP 154

The following BLAST results are available for this feature:

BLAST of Carg15345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925910.1	5.5e-63	99.38	uncharacterized protein LOC111433184 [Cucurbita moschata]	[more]
XP_022978779.1	5.5e-63	99.38	uncharacterized protein LOC111478638 [Cucurbita maxima]	[more]
XP_023543275.1	1.8e-58	91.30	uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_011658249.1	7.0e-42	70.06	PREDICTED: uncharacterized protein LOC101214777 [Cucumis sativus] >KGN49308.1 hy...	[more]
XP_018807552.1	1.9e-39	55.21	PREDICTED: uncharacterized protein LOC108980949 [Juglans regia]	[more]

BLAST of Carg15345 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G29195.1	1.2e-32	46.03	unknown protein	[more]
AT2G30230.1	2.0e-22	36.16	unknown protein	[more]
AT1G06980.1	1.7e-18	35.29	unknown protein	[more]

BLAST of Carg15345 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15345 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KI99\|A0A0A0KI99_CUCSA	4.6e-42	70.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1	[more]
tr\|A0A2I4DK90\|A0A2I4DK90_9ROSI	1.3e-39	55.21	uncharacterized protein LOC108980949 OS=Juglans regia OX=51240 GN=LOC108980949 P...	[more]
tr\|A0A1Q3BIW4\|A0A1Q3BIW4_CEPFO	3.1e-38	54.44	DUF4228 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_...	[more]
tr\|A0A059CCC6\|A0A059CCC6_EUCGR	5.8e-37	55.56	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D00486 PE=4 SV...	[more]
tr\|A0A2G9HPY1\|A0A2G9HPY1_9LAMI	7.6e-37	55.70	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07748 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15345-RA	Carg15345-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 3..155 e-value: 6.3E-32 score: 111.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..108
None	No IPR available	PANTHER	PTHR33052:SF26	SUBFAMILY NOT NAMED	coord: 1..155
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 1..155

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15345	Cla009695	Watermelon (97103) v1	carwmB0545
Carg15345	Cla019667	Watermelon (97103) v1	carwmB0544
Carg15345	Csa1G471460	Cucumber (Chinese Long) v2	carcuB0576
Carg15345	Csa6G519600	Cucumber (Chinese Long) v2	carcuB0578
Carg15345	MELO3C002655	Melon (DHL92) v3.5.1	carmeB0551
Carg15345	ClCG03G007660	Watermelon (Charleston Gray)	carwcgB0532
Carg15345	ClCG01G023750	Watermelon (Charleston Gray)	carwcgB0531
Carg15345	CSPI01G22110	Wild cucumber (PI 183967)	carcpiB0582
Carg15345	CSPI06G35400	Wild cucumber (PI 183967)	carcpiB0584
Carg15345	Cucsa.046980	Cucumber (Gy14) v1	carcgyB0623
Carg15345	Cucsa.213100	Cucumber (Gy14) v1	carcgyB0626
Carg15345	CmaCh13G006020	Cucurbita maxima (Rimu)	carcmaB0761
Carg15345	CmaCh03G013220	Cucurbita maxima (Rimu)	carcmaB0763
Carg15345	CmoCh03G013240	Cucurbita moschata (Rifu)	carcmoB0742
Carg15345	CmoCh13G006280	Cucurbita moschata (Rifu)	carcmoB0739
Carg15345	Lsi02G008090	Bottle gourd (USVL1VR-Ls)	carlsiB497
Carg15345	Lsi01G002400	Bottle gourd (USVL1VR-Ls)	carlsiB496
Carg15345	Cp4.1LG10g05490	Cucurbita pepo (Zucchini)	carcpeB0772
Carg15345	Cp4.1LG09g08040	Cucurbita pepo (Zucchini)	carcpeB0771
Carg15345	CsGy1G021760	Cucumber (Gy14) v2	carcgybB0552
Carg15345	CsGy6G034910	Cucumber (Gy14) v2	carcgybB0554
Carg15345	MELO3C002655.2	Melon (DHL92) v3.6.1	carmedB0557
Carg15345	CsaV3_1G033300	Cucumber (Chinese Long) v3	carcucB0583
Carg15345	CsaV3_6G050920	Cucumber (Chinese Long) v3	carcucB0585
Carg15345	Cla97C01G023700	Watermelon (97103) v2	carwmbB0571
Carg15345	Cla97C03G058980	Watermelon (97103) v2	carwmbB0573
Carg15345	Bhi03G000226	Wax gourd	carwgoB0657
Carg15345	Bhi08G001802	Wax gourd	carwgoB0659

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15345	Carg14583	Silver-seed gourd	carcarB174
Carg15345	Carg19878	Silver-seed gourd	carcarB508

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15345	Cucurbita maxima (Rimu)	carcmaB0762
Carg15345	Cucurbita maxima (Rimu)	carcmaB0766
Carg15345	Cucurbita moschata (Rifu)	carcmoB0741
Carg15345	Cucurbita moschata (Rifu)	carcmoB0745
Carg15345	Cucurbita pepo (Zucchini)	carcpeB0773
Carg15345	Cucurbita pepo (Zucchini)	carcpeB0775
Carg15345	Melon (DHL92) v3.5.1	carmeB0554
Carg15345	Melon (DHL92) v3.6.1	carmedB0560