Carg15132-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTGGCCGCCGTCGAAGCTCCATTACTAGTTCTTTTACTTCTTGCTGCAGCGCTGCGGTGGCCGCTCGCCGGAGCGCGGCTCCTAGTGGAGATGACGGTGGTCCAAAGCGCCTCTTCCATCGGCGCCTGTAAGTGAAAAAGATTCGTTTCCTTTTCTTTCCGTCTCTAATTTGGCATTTGATCGGATTTTGTTTTTGTATTTGGATTAGTCTGTTTAGACGGAAGCTTGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGCGCGGGAAACTGGCTTCTACAGTTCGAGGTGAATAA ATGAATCTGGCCGCCGTCGAAGCTCCATTACTAGTTCTTTTACTTCTTGCTGCAGCGCTGCGGTGGCCGCTCGCCGGAGCGCGGCTCCTAGTGGAGATGACGGTGGTCCAAAGCGCCTCTTCCATCGGCGCCTGTAAACGGAAGCTTGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGCGCGGGAAACTGGCTTCTACAGTTCGAGGTGAATAA ATGAATCTGGCCGCCGTCGAAGCTCCATTACTAGTTCTTTTACTTCTTGCTGCAGCGCTGCGGTGGCCGCTCGCCGGAGCGCGGCTCCTAGTGGAGATGACGGTGGTCCAAAGCGCCTCTTCCATCGGCGCCTGTAAACGGAAGCTTGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGCGCGGGAAACTGGCTTCTACAGTTCGAGGTGAATAA MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGACKRKLAGVSPGQRIRRRRGKLASTVRGE
BLAST of Carg15132-RA vs. NCBI nr
Match: XP_022922469.1 (pectin acetylesterase 9 [Cucurbita moschata]) HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
BLAST of Carg15132-RA vs. NCBI nr
Match: XP_022985445.1 (pectin acetylesterase 9 [Cucurbita maxima]) HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
BLAST of Carg15132-RA vs. NCBI nr
Match: XP_023552008.1 (pectin acetylesterase 9 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
BLAST of Carg15132-RA vs. NCBI nr
Match: XP_008439237.1 (PREDICTED: pectin acetylesterase 9 isoform X1 [Cucumis melo] >XP_008439238.1 PREDICTED: pectin acetylesterase 9 isoform X1 [Cucumis melo]) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-04 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of Carg15132-RA vs. NCBI nr
Match: XP_008439239.1 (PREDICTED: pectin acetylesterase 9 isoform X2 [Cucumis melo]) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-04 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of Carg15132-RA vs. TrEMBL
Match: tr|A0A1S3AYA0|A0A1S3AYA0_CUCME (Pectin acetylesterase OS=Cucumis melo OX=3656 GN=LOC103484085 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.7e-05 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of Carg15132-RA vs. TrEMBL
Match: tr|A0A1S3AYY8|A0A1S3AYY8_CUCME (Pectin acetylesterase OS=Cucumis melo OX=3656 GN=LOC103484085 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.7e-05 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of Carg15132-RA vs. TrEMBL
Match: tr|A0A0A0L8Q6|A0A0A0L8Q6_CUCSA (Pectin acetylesterase OS=Cucumis sativus OX=3659 GN=Csa_3G182200 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.7e-05 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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