Carg15108-RA (mRNA) Silver-seed gourd

Overview
NameCarg15108-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHeat shock protein
LocationCucurbita_argyrosperma_scaffold_078 : 578617 .. 579028 (-)
Sequence length279
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACGTGCAGATGGCTGATGCTGAGACCTTCGCCTTCCAGGCCGAGATTAACCAGCTTCTCAGTTTGATTATCAATACTTTCTACAGCAACAAGGAGATTTTCCTTCGAGAGCTTATCAGCAACTCCTCTGACGTGAGTTTATTTTACTTCCTTCTCTGTTTTTGTATCTTGTTTCCATTGAATGTCAAGCGTCGTCGAGATTTCAGTGAACTGTTTTGTTTCTGAATCTTCGAATGCTTAATTGTTTGGTTTGGATCATCTTTAGGCATTGGACAAGATTCGATATGAGAGTTTGACTGATAAGAGCAAACTTGACGCTCAACCAGAGCTTTTCATCAGAATTGTTCCGGACAAAGACAACAAAACTCTCTCCATCATCGATAGTGGAGTCGGAATGACTAAAGCA

mRNA sequence

ATGGCGGACGTGCAGATGGCTGATGCTGAGACCTTCGCCTTCCAGGCCGAGATTAACCAGCTTCTCAGTTTGATTATCAATACTTTCTACAGCAACAAGGAGATTTTCCTTCGAGAGCTTATCAGCAACTCCTCTGACGCATTGGACAAGATTCGATATGAGAGTTTGACTGATAAGAGCAAACTTGACGCTCAACCAGAGCTTTTCATCAGAATTGTTCCGGACAAAGACAACAAAACTCTCTCCATCATCGATAGTGGAGTCGGAATGACTAAAGCA

Coding sequence (CDS)

ATGGCGGACGTGCAGATGGCTGATGCTGAGACCTTCGCCTTCCAGGCCGAGATTAACCAGCTTCTCAGTTTGATTATCAATACTTTCTACAGCAACAAGGAGATTTTCCTTCGAGAGCTTATCAGCAACTCCTCTGACGCATTGGACAAGATTCGATATGAGAGTTTGACTGATAAGAGCAAACTTGACGCTCAACCAGAGCTTTTCATCAGAATTGTTCCGGACAAAGACAACAAAACTCTCTCCATCATCGATAGTGGAGTCGGAATGACTAAAGCA

Protein sequence

MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA
Homology
[Close]
BLAST of Carg15108-RA vs. NCBI nr
Match: XP_023552285.1 (heat shock protein 83 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 3.4e-41
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108-RA vs. NCBI nr
Match: XP_022922795.1 (heat shock protein 83 [Cucurbita moschata])

HSP 1 Score: 176.4 bits (446), Expect = 4.5e-41
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDKDNKTLS+IDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKDNKTLSVIDSGVGMTKA 93

[Close]
BLAST of Carg15108-RA vs. NCBI nr
Match: XP_022984568.1 (heat shock protein 83 [Cucurbita maxima])

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-40
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK+NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKNNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108-RA vs. NCBI nr
Match: XP_008439282.1 (PREDICTED: heat shock protein 83 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 3.8e-40
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKVNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108-RA vs. NCBI nr
Match: XP_022141183.1 (heat shock protein 83 [Momordica charantia])

HSP 1 Score: 172.6 bits (436), Expect = 6.5e-40
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIR+VPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRLVPDKVNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108-RA vs. TAIR10
Match: AT5G52640.1 (heat shock protein 90.1)

HSP 1 Score: 170.2 bits (430), Expect = 5.8e-43
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLD QPELFIR+VPDK NKTLSIIDSG+GMTKA
Sbjct: 61 KLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKA 93

[Close]
BLAST of Carg15108-RA vs. TAIR10
Match: AT5G56000.1 (HEAT SHOCK PROTEIN 81.4)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-38
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108-RA vs. TAIR10
Match: AT5G56010.1 (heat shock protein 81-3)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-38
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108-RA vs. TAIR10
Match: AT5G56030.2 (heat shock protein 81-2)

HSP 1 Score: 140.6 bits (353), Expect = 4.9e-34
Identity = 80/117 (68.38%), Postives = 84/117 (71.79%), Query Frame = 0 

Query: 6   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD------------------- 65
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD                   
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDVRSLSLSTLLYTCVSRLID 60

Query: 66  ----------ALDKIRYESLTDKSKLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
                     ALDKIR+ESLTDKSKLD QPELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61  LADGSVDLGLALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKA 117

[Close]
BLAST of Carg15108-RA vs. TAIR10
Match: AT3G07770.1 (HEAT SHOCK PROTEIN 89.1)

HSP 1 Score: 97.8 bits (242), Expect = 3.7e-21
Identity = 47/84 (55.95%), Postives = 66/84 (78.57%), Query Frame = 0 

Query: 9   AETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQPEL 68
           AE F +QAE+++L+ LI+N+ YSNKE+FLRELISN+SDALDK+RY S+T+       P+L
Sbjct: 94  AEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTNPELSKDAPDL 153

Query: 69  FIRIVPDKDNKTLSIIDSGVGMTK 93
            IRI  DK+N  +++ DSG+GMT+
Sbjct: 154 DIRIYADKENGIITLTDSGIGMTR 177

[Close]
BLAST of Carg15108-RA vs. Swiss-Prot
Match: sp|P51819|HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 8.9e-41
Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMA+AETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTDKS
Sbjct: 1  MADVQMAEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIR+VPDK NKTLSIIDSGVGM KA
Sbjct: 61 KLDAQPELFIRLVPDKTNKTLSIIDSGVGMAKA 93

[Close]
BLAST of Carg15108-RA vs. Swiss-Prot
Match: sp|P27323|HS901_ARATH (Heat shock protein 90-1 OS=Arabidopsis thaliana OX=3702 GN=HSP90-1 PE=1 SV=3)

HSP 1 Score: 161.0 bits (406), Expect = 6.4e-39
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFIR+VPDK NKTLSIIDSG+GMTKA
Sbjct: 61 PELFIRLVPDKSNKTLSIIDSGIGMTKA 88

[Close]
BLAST of Carg15108-RA vs. Swiss-Prot
Match: sp|P55737|HS902_ARATH (Heat shock protein 90-2 OS=Arabidopsis thaliana OX=3702 GN=HSP90-2 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-37
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108-RA vs. Swiss-Prot
Match: sp|P51818|HS903_ARATH (Heat shock protein 90-3 OS=Arabidopsis thaliana OX=3702 GN=HSP90-3 PE=1 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-37
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108-RA vs. Swiss-Prot
Match: sp|O03986|HS904_ARATH (Heat shock protein 90-4 OS=Arabidopsis thaliana OX=3702 GN=HSP90-4 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-37
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108-RA vs. TrEMBL
Match: tr|A0A1S3AY15|A0A1S3AY15_CUCME (heat shock protein 83 OS=Cucumis melo OX=3656 GN=LOC103484110 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.5e-40
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKVNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108-RA vs. TrEMBL
Match: tr|A0A2R6Q912|A0A2R6Q912_ACTCH (Heat shock protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc20247 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.6e-40
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKANKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108-RA vs. TrEMBL
Match: tr|M5XIS6|M5XIS6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G301300 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.3e-40
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSG+GMTKA
Sbjct: 61 KLDAQPELFIRIVPDKANKTLSIIDSGIGMTKA 93

[Close]
BLAST of Carg15108-RA vs. TrEMBL
Match: tr|A0A2R6RSM9|A0A2R6RSM9_ACTCH (Heat shock protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03418 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.3e-40
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSG+GMTKA
Sbjct: 61 KLDAQPELFIRIVPDKANKTLSIIDSGIGMTKA 93

[Close]
BLAST of Carg15108-RA vs. TrEMBL
Match: tr|A0A0A0L6P6|A0A0A0L6P6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183950 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.3e-40
Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLD QPELFIRIVPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDGQPELFIRIVPDKVNKTLSIIDSGVGMTKA 93

The following BLAST results are available for this feature:
BLAST of Carg15108-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023552285.13.4e-41100.00heat shock protein 83 [Cucurbita pepo subsp. pepo][more]
XP_022922795.14.5e-4198.92heat shock protein 83 [Cucurbita moschata][more]
XP_022984568.11.3e-4098.92heat shock protein 83 [Cucurbita maxima][more]
XP_008439282.13.8e-4098.92PREDICTED: heat shock protein 83 [Cucumis melo][more]
XP_022141183.16.5e-4097.85heat shock protein 83 [Momordica charantia][more]
BLAST of Carg15108-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52640.15.8e-4394.62heat shock protein 90.1[more]
AT5G56000.11.1e-3890.91HEAT SHOCK PROTEIN 81.4[more]
AT5G56010.11.1e-3890.91heat shock protein 81-3[more]
AT5G56030.24.9e-3468.38heat shock protein 81-2[more]
AT3G07770.13.7e-2155.95HEAT SHOCK PROTEIN 89.1[more]
BLAST of Carg15108-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P51819|HSP83_IPONI8.9e-4193.55Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1[more]
sp|P27323|HS901_ARATH6.4e-3994.32Heat shock protein 90-1 OS=Arabidopsis thaliana OX=3702 GN=HSP90-1 PE=1 SV=3[more]
sp|P55737|HS902_ARATH2.1e-3790.91Heat shock protein 90-2 OS=Arabidopsis thaliana OX=3702 GN=HSP90-2 PE=1 SV=1[more]
sp|P51818|HS903_ARATH2.1e-3790.91Heat shock protein 90-3 OS=Arabidopsis thaliana OX=3702 GN=HSP90-3 PE=1 SV=2[more]
sp|O03986|HS904_ARATH2.1e-3790.91Heat shock protein 90-4 OS=Arabidopsis thaliana OX=3702 GN=HSP90-4 PE=1 SV=1[more]
BLAST of Carg15108-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AY15|A0A1S3AY15_CUCME2.5e-4098.92heat shock protein 83 OS=Cucumis melo OX=3656 GN=LOC103484110 PE=3 SV=1[more]
tr|A0A2R6Q912|A0A2R6Q912_ACTCH5.6e-4097.85Heat shock protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc... [more]
tr|M5XIS6|M5XIS6_PRUPE7.3e-4096.77Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G301300 PE=3 SV=1[more]
tr|A0A2R6RSM9|A0A2R6RSM9_ACTCH7.3e-4096.77Heat shock protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc... [more]
tr|A0A0A0L6P6|A0A0A0L6P6_CUCSA7.3e-4097.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183950 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006457protein folding
Vocabulary: INTERPRO
TermDefinition
IPR019805Heat_shock_protein_90_CS
IPR001404Hsp90_fam
IPR036890HATPase_C_sf
IPR003594HATPase_C
IPR020575Hsp90_N
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0006950 response to stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg15108Carg15108gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg15108-RA.CDS.2Carg15108-RA.CDS.2CDS
Carg15108-RA.CDS.1Carg15108-RA.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg15108-RA.exon.2Carg15108-RA.exon.2exon
Carg15108-RA.exon.1Carg15108-RA.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg15108-RACarg15108-RA-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020575Heat shock protein Hsp90, N-terminalPRINTSPR00775HEATSHOCK90coord: 31..53
score: 90.64
coord: 80..93
score: 52.05
coord: 10..30
score: 77.0
IPR003594Histidine kinase/HSP90-like ATPasePFAMPF02518HATPase_ccoord: 32..92
e-value: 6.2E-7
score: 29.9
IPR003594Histidine kinase/HSP90-like ATPaseCDDcd00075HATPase_ccoord: 34..93
e-value: 3.26517E-4
score: 34.1594
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3DG3DSA:3.30.565.10coord: 10..92
e-value: 5.7E-36
score: 126.0
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILYSSF55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 10..92
NoneNo IPR availablePANTHERPTHR11528:SF74SUBFAMILY NOT NAMEDcoord: 1..93
IPR001404Heat shock protein Hsp90 familyPANTHERPTHR11528HEAT SHOCK PROTEIN 90coord: 1..93
IPR019805Heat shock protein Hsp90, conserved sitePROSITEPS00298HSP90coord: 30..39