Carg15108 (gene) Silver-seed gourd

Overview
NameCarg15108
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHeat shock protein
LocationCucurbita_argyrosperma_scaffold_078 : 578617 .. 579028 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACGTGCAGATGGCTGATGCTGAGACCTTCGCCTTCCAGGCCGAGATTAACCAGCTTCTCAGTTTGATTATCAATACTTTCTACAGCAACAAGGAGATTTTCCTTCGAGAGCTTATCAGCAACTCCTCTGACGTGAGTTTATTTTACTTCCTTCTCTGTTTTTGTATCTTGTTTCCATTGAATGTCAAGCGTCGTCGAGATTTCAGTGAACTGTTTTGTTTCTGAATCTTCGAATGCTTAATTGTTTGGTTTGGATCATCTTTAGGCATTGGACAAGATTCGATATGAGAGTTTGACTGATAAGAGCAAACTTGACGCTCAACCAGAGCTTTTCATCAGAATTGTTCCGGACAAAGACAACAAAACTCTCTCCATCATCGATAGTGGAGTCGGAATGACTAAAGCA

mRNA sequence

ATGGCGGACGTGCAGATGGCTGATGCTGAGACCTTCGCCTTCCAGGCCGAGATTAACCAGCTTCTCAGTTTGATTATCAATACTTTCTACAGCAACAAGGAGATTTTCCTTCGAGAGCTTATCAGCAACTCCTCTGACGCATTGGACAAGATTCGATATGAGAGTTTGACTGATAAGAGCAAACTTGACGCTCAACCAGAGCTTTTCATCAGAATTGTTCCGGACAAAGACAACAAAACTCTCTCCATCATCGATAGTGGAGTCGGAATGACTAAAGCA

Coding sequence (CDS)

ATGGCGGACGTGCAGATGGCTGATGCTGAGACCTTCGCCTTCCAGGCCGAGATTAACCAGCTTCTCAGTTTGATTATCAATACTTTCTACAGCAACAAGGAGATTTTCCTTCGAGAGCTTATCAGCAACTCCTCTGACGCATTGGACAAGATTCGATATGAGAGTTTGACTGATAAGAGCAAACTTGACGCTCAACCAGAGCTTTTCATCAGAATTGTTCCGGACAAAGACAACAAAACTCTCTCCATCATCGATAGTGGAGTCGGAATGACTAAAGCA

Protein sequence

MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA
Homology
[Close]
BLAST of Carg15108 vs. NCBI nr
Match: XP_023552285.1 (heat shock protein 83 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 3.4e-41
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108 vs. NCBI nr
Match: XP_022922795.1 (heat shock protein 83 [Cucurbita moschata])

HSP 1 Score: 176.4 bits (446), Expect = 4.5e-41
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDKDNKTLS+IDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKDNKTLSVIDSGVGMTKA 93

[Close]
BLAST of Carg15108 vs. NCBI nr
Match: XP_022984568.1 (heat shock protein 83 [Cucurbita maxima])

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-40
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK+NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKNNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108 vs. NCBI nr
Match: XP_008439282.1 (PREDICTED: heat shock protein 83 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 3.8e-40
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKVNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108 vs. NCBI nr
Match: XP_022141183.1 (heat shock protein 83 [Momordica charantia])

HSP 1 Score: 172.6 bits (436), Expect = 6.5e-40
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIR+VPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRLVPDKVNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108 vs. TAIR10
Match: AT5G52640.1 (heat shock protein 90.1)

HSP 1 Score: 170.2 bits (430), Expect = 5.8e-43
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLD QPELFIR+VPDK NKTLSIIDSG+GMTKA
Sbjct: 61 KLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKA 93

[Close]
BLAST of Carg15108 vs. TAIR10
Match: AT5G56000.1 (HEAT SHOCK PROTEIN 81.4)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-38
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108 vs. TAIR10
Match: AT5G56010.1 (heat shock protein 81-3)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-38
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108 vs. TAIR10
Match: AT5G56030.2 (heat shock protein 81-2)

HSP 1 Score: 140.6 bits (353), Expect = 4.9e-34
Identity = 80/117 (68.38%), Postives = 84/117 (71.79%), Query Frame = 0 

Query: 6   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD------------------- 65
           MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD                   
Sbjct: 1   MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDVRSLSLSTLLYTCVSRLID 60

Query: 66  ----------ALDKIRYESLTDKSKLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
                     ALDKIR+ESLTDKSKLD QPELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61  LADGSVDLGLALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKA 117

[Close]
BLAST of Carg15108 vs. TAIR10
Match: AT3G07770.1 (HEAT SHOCK PROTEIN 89.1)

HSP 1 Score: 97.8 bits (242), Expect = 3.7e-21
Identity = 47/84 (55.95%), Postives = 66/84 (78.57%), Query Frame = 0 

Query: 9   AETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQPEL 68
           AE F +QAE+++L+ LI+N+ YSNKE+FLRELISN+SDALDK+RY S+T+       P+L
Sbjct: 94  AEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTNPELSKDAPDL 153

Query: 69  FIRIVPDKDNKTLSIIDSGVGMTK 93
            IRI  DK+N  +++ DSG+GMT+
Sbjct: 154 DIRIYADKENGIITLTDSGIGMTR 177

[Close]
BLAST of Carg15108 vs. Swiss-Prot
Match: sp|P51819|HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 8.9e-41
Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMA+AETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTDKS
Sbjct: 1  MADVQMAEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIR+VPDK NKTLSIIDSGVGM KA
Sbjct: 61 KLDAQPELFIRLVPDKTNKTLSIIDSGVGMAKA 93

[Close]
BLAST of Carg15108 vs. Swiss-Prot
Match: sp|P27323|HS901_ARATH (Heat shock protein 90-1 OS=Arabidopsis thaliana OX=3702 GN=HSP90-1 PE=1 SV=3)

HSP 1 Score: 161.0 bits (406), Expect = 6.4e-39
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFIR+VPDK NKTLSIIDSG+GMTKA
Sbjct: 61 PELFIRLVPDKSNKTLSIIDSGIGMTKA 88

[Close]
BLAST of Carg15108 vs. Swiss-Prot
Match: sp|P55737|HS902_ARATH (Heat shock protein 90-2 OS=Arabidopsis thaliana OX=3702 GN=HSP90-2 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-37
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108 vs. Swiss-Prot
Match: sp|P51818|HS903_ARATH (Heat shock protein 90-3 OS=Arabidopsis thaliana OX=3702 GN=HSP90-3 PE=1 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-37
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108 vs. Swiss-Prot
Match: sp|O03986|HS904_ARATH (Heat shock protein 90-4 OS=Arabidopsis thaliana OX=3702 GN=HSP90-4 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-37
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0 

Query: 6  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKSKLDAQ 65
          MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKSKLD Q
Sbjct: 1  MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ 60

Query: 66 PELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          PELFI I+PDK N TL+IIDSG+GMTKA
Sbjct: 61 PELFIHIIPDKTNNTLTIIDSGIGMTKA 88

[Close]
BLAST of Carg15108 vs. TrEMBL
Match: tr|A0A1S3AY15|A0A1S3AY15_CUCME (heat shock protein 83 OS=Cucumis melo OX=3656 GN=LOC103484110 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.5e-40
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKVNKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108 vs. TrEMBL
Match: tr|A0A2R6Q912|A0A2R6Q912_ACTCH (Heat shock protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc20247 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.6e-40
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDAQPELFIRIVPDKANKTLSIIDSGVGMTKA 93

[Close]
BLAST of Carg15108 vs. TrEMBL
Match: tr|M5XIS6|M5XIS6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G301300 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.3e-40
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSG+GMTKA
Sbjct: 61 KLDAQPELFIRIVPDKANKTLSIIDSGIGMTKA 93

[Close]
BLAST of Carg15108 vs. TrEMBL
Match: tr|A0A2R6RSM9|A0A2R6RSM9_ACTCH (Heat shock protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03418 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.3e-40
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLDAQPELFIRIVPDK NKTLSIIDSG+GMTKA
Sbjct: 61 KLDAQPELFIRIVPDKANKTLSIIDSGIGMTKA 93

[Close]
BLAST of Carg15108 vs. TrEMBL
Match: tr|A0A0A0L6P6|A0A0A0L6P6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183950 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.3e-40
Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
          MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS
Sbjct: 1  MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60

Query: 61 KLDAQPELFIRIVPDKDNKTLSIIDSGVGMTKA 94
          KLD QPELFIRIVPDK NKTLSIIDSGVGMTKA
Sbjct: 61 KLDGQPELFIRIVPDKVNKTLSIIDSGVGMTKA 93

The following BLAST results are available for this feature:
BLAST of Carg15108 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023552285.13.4e-41100.00heat shock protein 83 [Cucurbita pepo subsp. pepo][more]
XP_022922795.14.5e-4198.92heat shock protein 83 [Cucurbita moschata][more]
XP_022984568.11.3e-4098.92heat shock protein 83 [Cucurbita maxima][more]
XP_008439282.13.8e-4098.92PREDICTED: heat shock protein 83 [Cucumis melo][more]
XP_022141183.16.5e-4097.85heat shock protein 83 [Momordica charantia][more]
BLAST of Carg15108 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52640.15.8e-4394.62heat shock protein 90.1[more]
AT5G56000.11.1e-3890.91HEAT SHOCK PROTEIN 81.4[more]
AT5G56010.11.1e-3890.91heat shock protein 81-3[more]
AT5G56030.24.9e-3468.38heat shock protein 81-2[more]
AT3G07770.13.7e-2155.95HEAT SHOCK PROTEIN 89.1[more]
BLAST of Carg15108 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P51819|HSP83_IPONI8.9e-4193.55Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1[more]
sp|P27323|HS901_ARATH6.4e-3994.32Heat shock protein 90-1 OS=Arabidopsis thaliana OX=3702 GN=HSP90-1 PE=1 SV=3[more]
sp|P55737|HS902_ARATH2.1e-3790.91Heat shock protein 90-2 OS=Arabidopsis thaliana OX=3702 GN=HSP90-2 PE=1 SV=1[more]
sp|P51818|HS903_ARATH2.1e-3790.91Heat shock protein 90-3 OS=Arabidopsis thaliana OX=3702 GN=HSP90-3 PE=1 SV=2[more]
sp|O03986|HS904_ARATH2.1e-3790.91Heat shock protein 90-4 OS=Arabidopsis thaliana OX=3702 GN=HSP90-4 PE=1 SV=1[more]
BLAST of Carg15108 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AY15|A0A1S3AY15_CUCME2.5e-4098.92heat shock protein 83 OS=Cucumis melo OX=3656 GN=LOC103484110 PE=3 SV=1[more]
tr|A0A2R6Q912|A0A2R6Q912_ACTCH5.6e-4097.85Heat shock protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc... [more]
tr|M5XIS6|M5XIS6_PRUPE7.3e-4096.77Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G301300 PE=3 SV=1[more]
tr|A0A2R6RSM9|A0A2R6RSM9_ACTCH7.3e-4096.77Heat shock protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc... [more]
tr|A0A0A0L6P6|A0A0A0L6P6_CUCSA7.3e-4097.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183950 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006457protein folding
Vocabulary: INTERPRO
TermDefinition
IPR019805Heat_shock_protein_90_CS
IPR001404Hsp90_fam
IPR036890HATPase_C_sf
IPR003594HATPase_C
IPR020575Hsp90_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0006950 response to stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15108-RACarg15108-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020575Heat shock protein Hsp90, N-terminalPRINTSPR00775HEATSHOCK90coord: 31..53
score: 90.64
coord: 80..93
score: 52.05
coord: 10..30
score: 77.0
IPR003594Histidine kinase/HSP90-like ATPasePFAMPF02518HATPase_ccoord: 32..92
e-value: 6.2E-7
score: 29.9
IPR003594Histidine kinase/HSP90-like ATPaseCDDcd00075HATPase_ccoord: 34..93
e-value: 3.26517E-4
score: 34.1594
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3DG3DSA:3.30.565.10coord: 10..92
e-value: 5.7E-36
score: 126.0
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILYSSF55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 10..92
NoneNo IPR availablePANTHERPTHR11528:SF74SUBFAMILY NOT NAMEDcoord: 1..93
IPR001404Heat shock protein Hsp90 familyPANTHERPTHR11528HEAT SHOCK PROTEIN 90coord: 1..93
IPR019805Heat shock protein Hsp90, conserved sitePROSITEPS00298HSP90coord: 30..39

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg15108Lsi05G011930Bottle gourd (USVL1VR-Ls)carlsiB903
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg15108Wax gourdcarwgoB1158
Carg15108Silver-seed gourdcarcarB585
Carg15108Silver-seed gourdcarcarB594
Carg15108Cucumber (Gy14) v2carcgybB0978
Carg15108Cucumber (Gy14) v2carcgybB0976
Carg15108Cucumber (Gy14) v1carcgyB1105
Carg15108Cucurbita maxima (Rimu)carcmaB1364
Carg15108Cucurbita maxima (Rimu)carcmaB1365
Carg15108Cucurbita maxima (Rimu)carcmaB1366
Carg15108Cucurbita maxima (Rimu)carcmaB1368
Carg15108Cucurbita maxima (Rimu)carcmaB1369
Carg15108Cucurbita moschata (Rifu)carcmoB1325
Carg15108Cucurbita moschata (Rifu)carcmoB1326
Carg15108Cucurbita moschata (Rifu)carcmoB1328
Carg15108Cucurbita moschata (Rifu)carcmoB1329
Carg15108Cucurbita pepo (Zucchini)carcpeB1373
Carg15108Cucurbita pepo (Zucchini)carcpeB1375
Carg15108Cucurbita pepo (Zucchini)carcpeB1376
Carg15108Cucurbita pepo (Zucchini)carcpeB1377
Carg15108Wild cucumber (PI 183967)carcpiB1029
Carg15108Wild cucumber (PI 183967)carcpiB1027
Carg15108Cucumber (Chinese Long) v2carcuB1004
Carg15108Cucumber (Chinese Long) v2carcuB1005
Carg15108Cucumber (Chinese Long) v3carcucB1032
Carg15108Cucumber (Chinese Long) v3carcucB1035
Carg15108Bottle gourd (USVL1VR-Ls)carlsiB902
Carg15108Melon (DHL92) v3.5.1carmeB0963
Carg15108Melon (DHL92) v3.5.1carmeB0962
Carg15108Melon (DHL92) v3.5.1carmeB0966
Carg15108Melon (DHL92) v3.6.1carmedB0970
Carg15108Melon (DHL92) v3.6.1carmedB0972
Carg15108Melon (DHL92) v3.6.1carmedB0975
Carg15108Watermelon (Charleston Gray)carwcgB0963
Carg15108Watermelon (Charleston Gray)carwcgB0964
Carg15108Watermelon (Charleston Gray)carwcgB0965
Carg15108Watermelon (97103) v1carwmB0990
Carg15108Watermelon (97103) v1carwmB0991
Carg15108Watermelon (97103) v2carwmbB1040
Carg15108Watermelon (97103) v2carwmbB1041
Carg15108Watermelon (97103) v2carwmbB1042