Carg12954-RA (mRNA) Silver-seed gourd

NameCarg12954-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_052 : 278495 .. 279941 (+)
Sequence length376
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCTCTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTAATCTAGCCATGGACCCCATGGGAAGGAAAGAAGGAAGAGTGGAGAAATCTCACTTAAAGCTAAGCATATAAGCAAAGCAGAGAGAGCTGAGAAGGAGAGGATGGCCAAACACAGCTCCCAAAACAAAGCTGACTGTCAAACCAAGAAGGGGTAGAGAAGGACAGTGCAAGGACCAGTGTCTGGTTTATATAGCAAGGTAAAGTTCCAAACAAGGCTGCCATTTCCCTTTTATTACATAAACACCACCCATGATTTCTTCCTCCAAAATGGCCTACTTTTTAGGCTTTCGGTTCTCACGCTCATGAGTGAAGGAACTATAGGAAAAAAATTCAAAAAAGACAATATCTATTAATGGTAAGCTTGGGGACTGAGCTCGAAGAGGAGTGAACACAAGACAAAGATAATATCTATTAATGGTAGGTTTGGGGACCCAGCCTCGAAGAAGAGTGAACACAAGACAGTGTACTAGCAAGGACGCTGGACCTCTAAATAGGTGGATTGTGAGATTTCACGTCGATTGAGGAAGAAAACAAAACATTCTCTAAAAAGGTATGGAAACTTCTTCCTAGAAGTGTTTTTAAATTTTTGAGAGGATGTTACAAAAAGAAAAAGAGGTCATTTTTGGAAGAAGACAGCCTATTCCATGAGGAAAAAAGCCCACAAAATGTGCTCTTCCTCACGGGTTTAGCTTGTTTGGAAGTAACCCGTGAATGAGAATTTTGTATTGTACCTCAGATGACAGATTTTGGAAACACTGAGACTGTGAGGTTTATATGTGCAATTTTGTCTTTCCTTTCATATGAATGAATGGCTACTAAAATCACATCTCTGAATCATTTATTTACCAACATGAAAATAATACTTCAAAGGTAAGATTTGAGATTTGAGTAAAGCATTAAATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATTCCTTTTCTTCTCTCTGTTCTTATTTCCCACACCATGACAAACCCACCTCCCCAGCTGGAAAACGCGTTATGTTTTGTCATTGCTCATTTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTCTTTTCAGGTTATGCAGTGAAAATACTTTGAAGGGTTGTGTGCACATGGAAGTGGGAGAGGCTGAAATTGCTGACTATGAAAATTGCTGACTATGAAAATTGCACACAAAGTGTTCGACAAAATGCCAATGAGACCGAGAAGAGGACAATTTGGTGGCATTTTGGGAGAAGTGACGAGAGG

mRNA sequence

ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCTCTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTTATGCAGTGAAAATACTTTGAAGGGTTGTGTGCACATGGAAGTGGGAGAGGCTGAAATTGCTGACTATGAAAATTGCTGACTATGAAAATTGCACACAAAGTGTTCGACAAAATGCCAATGAGACCGAGAAGAGGACAATTTGGTGGCATTTTGGGAGAAGTGACGAGAGG

Coding sequence (CDS)

ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCTCTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTTATGCAGTGAAAATACTTTGAAGGGTTGTGTGCACATGGAAGTGGGAGAGGCTGAAATTGCTGACTATGAAAATTGCTGA

Protein sequence

MVGGGVGVEKGIGGSRGGQRLEMGRVPVMVGEIIRWQSMMFHANNVGSLGIDKDTRKKKKKKKKGSNELCSENTLKGCVHMEVGEAEIADYENC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg12954Carg12954gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12954-RA.exon.1Carg12954-RA.exon.1exon
Carg12954-RA.exon.2Carg12954-RA.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12954-RA.CDS.1Carg12954-RA.CDS.1CDS
Carg12954-RA.CDS.2Carg12954-RA.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12954-RA.three_prime_UTR.1Carg12954-RA.three_prime_UTR.1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg12954-RACarg12954-RA-proteinpolypeptide