Carg12954 (gene) Silver-seed gourd

NameCarg12954
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_052 : 278495 .. 279941 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCTCTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTAATCTAGCCATGGACCCCATGGGAAGGAAAGAAGGAAGAGTGGAGAAATCTCACTTAAAGCTAAGCATATAAGCAAAGCAGAGAGAGCTGAGAAGGAGAGGATGGCCAAACACAGCTCCCAAAACAAAGCTGACTGTCAAACCAAGAAGGGGTAGAGAAGGACAGTGCAAGGACCAGTGTCTGGTTTATATAGCAAGGTAAAGTTCCAAACAAGGCTGCCATTTCCCTTTTATTACATAAACACCACCCATGATTTCTTCCTCCAAAATGGCCTACTTTTTAGGCTTTCGGTTCTCACGCTCATGAGTGAAGGAACTATAGGAAAAAAATTCAAAAAAGACAATATCTATTAATGGTAAGCTTGGGGACTGAGCTCGAAGAGGAGTGAACACAAGACAAAGATAATATCTATTAATGGTAGGTTTGGGGACCCAGCCTCGAAGAAGAGTGAACACAAGACAGTGTACTAGCAAGGACGCTGGACCTCTAAATAGGTGGATTGTGAGATTTCACGTCGATTGAGGAAGAAAACAAAACATTCTCTAAAAAGGTATGGAAACTTCTTCCTAGAAGTGTTTTTAAATTTTTGAGAGGATGTTACAAAAAGAAAAAGAGGTCATTTTTGGAAGAAGACAGCCTATTCCATGAGGAAAAAAGCCCACAAAATGTGCTCTTCCTCACGGGTTTAGCTTGTTTGGAAGTAACCCGTGAATGAGAATTTTGTATTGTACCTCAGATGACAGATTTTGGAAACACTGAGACTGTGAGGTTTATATGTGCAATTTTGTCTTTCCTTTCATATGAATGAATGGCTACTAAAATCACATCTCTGAATCATTTATTTACCAACATGAAAATAATACTTCAAAGGTAAGATTTGAGATTTGAGTAAAGCATTAAATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATTCCTTTTCTTCTCTCTGTTCTTATTTCCCACACCATGACAAACCCACCTCCCCAGCTGGAAAACGCGTTATGTTTTGTCATTGCTCATTTTTTCTTCTTCTTCTTTTTTTTTTTTTTTTCTTTTCAGGTTATGCAGTGAAAATACTTTGAAGGGTTGTGTGCACATGGAAGTGGGAGAGGCTGAAATTGCTGACTATGAAAATTGCTGACTATGAAAATTGCACACAAAGTGTTCGACAAAATGCCAATGAGACCGAGAAGAGGACAATTTGGTGGCATTTTGGGAGAAGTGACGAGAGG

mRNA sequence

ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCTCTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTTATGCAGTGAAAATACTTTGAAGGGTTGTGTGCACATGGAAGTGGGAGAGGCTGAAATTGCTGACTATGAAAATTGCTGACTATGAAAATTGCACACAAAGTGTTCGACAAAATGCCAATGAGACCGAGAAGAGGACAATTTGGTGGCATTTTGGGAGAAGTGACGAGAGG

Coding sequence (CDS)

ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCTCTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTTATGCAGTGAAAATACTTTGAAGGGTTGTGTGCACATGGAAGTGGGAGAGGCTGAAATTGCTGACTATGAAAATTGCTGA

Protein sequence

MVGGGVGVEKGIGGSRGGQRLEMGRVPVMVGEIIRWQSMMFHANNVGSLGIDKDTRKKKKKKKKGSNELCSENTLKGCVHMEVGEAEIADYENC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12954-RACarg12954-RAmRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12954CmaCh10G007680Cucurbita maxima (Rimu)carcmaB0119
Carg12954CmoCh10G007990Cucurbita moschata (Rifu)carcmoB0128
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg12954Wax gourdcarwgoB0109
Carg12954Wax gourdcarwgoB0106
Carg12954Wax gourdcarwgoB0108
Carg12954Wax gourdcarwgoB0110
Carg12954Silver-seed gourdcarcarB102
Carg12954Silver-seed gourdcarcarB104
Carg12954Silver-seed gourdcarcarB105
Carg12954Silver-seed gourdcarcarB106
Carg12954Silver-seed gourdcarcarB107
Carg12954Silver-seed gourdcarcarB108
Carg12954Cucumber (Gy14) v2carcgybB0101
Carg12954Cucumber (Gy14) v2carcgybB0102
Carg12954Cucumber (Gy14) v2carcgybB0103
Carg12954Cucumber (Gy14) v2carcgybB0104
Carg12954Cucumber (Gy14) v1carcgyB0111
Carg12954Cucumber (Gy14) v1carcgyB0112
Carg12954Cucumber (Gy14) v1carcgyB0115
Carg12954Cucurbita maxima (Rimu)carcmaB0120
Carg12954Cucurbita maxima (Rimu)carcmaB0121
Carg12954Cucurbita maxima (Rimu)carcmaB0122
Carg12954Cucurbita maxima (Rimu)carcmaB0123
Carg12954Cucurbita maxima (Rimu)carcmaB0125
Carg12954Cucurbita maxima (Rimu)carcmaB0126
Carg12954Cucurbita moschata (Rifu)carcmoB0135
Carg12954Cucurbita moschata (Rifu)carcmoB0127
Carg12954Cucurbita moschata (Rifu)carcmoB0129
Carg12954Cucurbita moschata (Rifu)carcmoB0130
Carg12954Cucurbita moschata (Rifu)carcmoB0131
Carg12954Cucurbita moschata (Rifu)carcmoB0134
Carg12954Cucurbita pepo (Zucchini)carcpeB0135
Carg12954Cucurbita pepo (Zucchini)carcpeB0136
Carg12954Cucurbita pepo (Zucchini)carcpeB0137
Carg12954Cucurbita pepo (Zucchini)carcpeB0138
Carg12954Cucurbita pepo (Zucchini)carcpeB0139
Carg12954Cucurbita pepo (Zucchini)carcpeB0141
Carg12954Cucurbita pepo (Zucchini)carcpeB0142
Carg12954Cucurbita pepo (Zucchini)carcpeB0143
Carg12954Wild cucumber (PI 183967)carcpiB0106
Carg12954Wild cucumber (PI 183967)carcpiB0107
Carg12954Wild cucumber (PI 183967)carcpiB0108
Carg12954Wild cucumber (PI 183967)carcpiB0109
Carg12954Cucumber (Chinese Long) v2carcuB0101
Carg12954Cucumber (Chinese Long) v2carcuB0102
Carg12954Cucumber (Chinese Long) v2carcuB0103
Carg12954Cucumber (Chinese Long) v2carcuB0104
Carg12954Cucumber (Chinese Long) v3carcucB0109
Carg12954Cucumber (Chinese Long) v3carcucB0110
Carg12954Cucumber (Chinese Long) v3carcucB0111
Carg12954Cucumber (Chinese Long) v3carcucB0113
Carg12954Bottle gourd (USVL1VR-Ls)carlsiB084
Carg12954Bottle gourd (USVL1VR-Ls)carlsiB085
Carg12954Bottle gourd (USVL1VR-Ls)carlsiB083
Carg12954Bottle gourd (USVL1VR-Ls)carlsiB086
Carg12954Melon (DHL92) v3.5.1carmeB0095
Carg12954Melon (DHL92) v3.5.1carmeB0096
Carg12954Melon (DHL92) v3.5.1carmeB0097
Carg12954Melon (DHL92) v3.5.1carmeB0098
Carg12954Melon (DHL92) v3.6.1carmedB0097
Carg12954Melon (DHL92) v3.6.1carmedB0098
Carg12954Melon (DHL92) v3.6.1carmedB0099
Carg12954Melon (DHL92) v3.6.1carmedB0100
Carg12954Watermelon (Charleston Gray)carwcgB0092
Carg12954Watermelon (Charleston Gray)carwcgB0093
Carg12954Watermelon (Charleston Gray)carwcgB0094
Carg12954Watermelon (97103) v1carwmB0089
Carg12954Watermelon (97103) v1carwmB0090
Carg12954Watermelon (97103) v1carwmB0093
Carg12954Watermelon (97103) v2carwmbB0093
Carg12954Watermelon (97103) v2carwmbB0094
Carg12954Watermelon (97103) v2carwmbB0097