Carg12333-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12333-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	K-stimulated pyrophosphate-energized sodium pump protein
Location	Cucurbita_argyrosperma_scaffold_074 : 367258 .. 371452 (-)
Sequence length	1589

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGGTGGGTGAATTTGCACCATGCCTTTTCTTTACGCAGATGTGATTTTCCATTTCCATTTCTTTTTTTTTTTTATTGATAATGAAATAATTTGATATTTTCTTGGCATTTTCTCGTGGTTTTCATCTCAAATTTATTTAAGAAGTTACCCTCCATCTCGATTCCCTTGTTTCTATAAATAACTATTCTGTGTTTAAATGAATTCTCGTTGTATTATTATCGTCATGTAAAACTTGTTCTGTTTTCAATTGGTTTTGGAATTTGTCTAAACATGTTTGCCCATGTTGCTATCTTCTTCTTTTTCTTCTATTTTATTAGAAAGATTTGGTGACTGATGCTGATCCATCTTGCAGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACGAATATCTTCTGGTATGGATTTATCAACTTGTTGCAAATACCTGTTTTATACATCATCTGATCTTGATATAGATCACAATCATGCGAAGCTTTTTCATTATTCTTACTTTTGTCTTGCACGGTGGCACCAAAGCCTGTCTTAAAATATATTATGCTTTGTTGGCTAAGTACAGAGTCGCTGATAAAATGTACTATTAAGTTTTTTAGCAAGCGTTCTTAATCGTTCATGGTATTTCAATGTTAGATTAAAAGAAGCATGGATGCAAGACATTTACACTTCTCTGTTGATATATAGATGTCTTCTAGGATATATGGTTCTGATACGTACCGATGGTTGATTCTCATGTTGCAAATTTGTTTTAGTTTATTATATTTCACTTGAAAGATAATGTAAAAGAAGTTGAAAAATTAGTTGCCTGCACTATACAGTTTTATCAAAATATTTGACACATTAAAACAGATTAAGATGACAAAAAATTAGTTGCTATCTCTTATGAGACAATATACCGTGTTTCAAAATATTTGAAGAAATTGAGACCAACTTATCTTTTTCCTAAATGATTTAATATCTTGACATGAAATTTAAAAAGTACCTATGCATTTATATTTATTACATGTTTGTAGAAACAAGTTTGATACTTTTCACTCTTAATTTTTATTATTTTTTGTACTTTCATTTTATGTCCATCAATTTCTAGAAGTAGACAGATAAAAGTTCATACACTTGGTGTCCAATAATTATTTGAGATATATTCTGGAGTGTCCATATTTGTCTATAATGTTTTGCCATGTGTTGAACAAATATGGGGCTCGTACAAATGCACTAGAGTATCCAATGTATGTCAATTGTGCTTAACGTTAGAATGTCAGCGTGTTCAATACATGTTGGACACACATTTTGTCTTGACTCGACTGCCCGTTGTATTTGCTAATTTACATTGGCATGGCATTTCTTTAGCTTCCAATTTTCCTTTTGAACATAAAGAGTTTTTTGTATTCATGTGTGAGTACTAATCATCCACAAATTAGATCCATTTCCAGTTCAGACACTTTAACCCATGAACAAGTGCACCCGTTATGTTAGGGTCTCTCTTGCATTGATGGAGAGGGCATTCGCTTCATTGTGATTAATGACTGTTAGGAGCATCTGATCATGAGTTATCCCATTGAGGAATTGAAACTTCCAAACTGGAGTTAGCATCATATACACGAGTATTTCATTCCATACAGCTGCTGACTTCATCTTTTATGTTCCTCATTTTAAACATGCAATGAAAACGATATTTTGGTATCATCGTAATAACCTTTGTATGCTGATTCAGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATGTAAGAGTTTGGTCTAGAATTTTTTTTTTTTTTTTTCCTTTGCCCTTCTTTTGATGCCCTGTGTTCAGTATTTTGTGCTAACCCCCCTTCATATCAATGTTCAGTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTAGAGTTTAAAGTTTATACTTAATTTTGCATGATAAAAGTTATTTATTATAATCTAAAACGTTTTACAACAATTCAGGTAGTGCCATTAATGCGACTGTTTTCAAGAGAATTATTTTGTTTTTCTTGAATATTGTTTTGTTATTGACTCCTTTCTTTCTTCTCCTCGCCCCCTCCCTCTTTTTCTCGTTTTTCTTTTTTCTCCATGGCAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGGTGAGCTTATCAATTTTTAAGGTGACTTTTTACCCACTAAGATTTTGTTACTTGGGAGCCCATCTGTATATAATAATCCGTTATGCTTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGGTATTGACATGTAATGTAGCACCAAAATTCTATTGTCGAGTCTTTTTGTTTAAACAAATATTTAGATGAACATGTATTTAAGTTTCTTTAGTACTTTTGTATCATGAAATAGCTTGTTTTGCTACTATCATTATTATATACATCTGCATTGGTCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGTAATTGGCTAACATCATTTCTGGTCAACATTTCTTATCGTAATTGTTCTAATCAACGTCATTAATTTATATAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCCGCATGGGACGCTCTGGATTTTCTATTCCCAGTAAGTTTGAATGGCCCAAAACTCATTGCTCTATTAACAACTTCTAAGCATGCTCTTTTATAGTTTTAACTTCGATGACTTCAATGTTTCTCCAACCCTTCGTCTGACGCCTGGTGTTACATGAATCATGAAATATTAACCAAAAAAGAATGTCGGTTAAACTATTCTCCTTCCCGGTAACTAGACATGGAAACCGAAAAAACACTCTAGATTAGAGCACCTCCGTATTTTAGAAGTACTTTGTAATCACACTTTAGCATTGTTATGCTGAGAAAATCGAAAAATTTTGATGAAGGATTTTTGGTACAGGTGGGACGATATCCTAGGCATCTAATAAGCCTATTTTTCAGATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGCATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGGTGTTTTCTAGATTTGAGAATCCAAAACAGCACAAGTCTTACTAGGCCACAGAAACCAAGTTTGTATATGTACACAAAGACATGTTTTCCCCTCAGGTCATGCTGCCCCCCACTTCCTGTTGGGGGCTGTGTATTGATATCTTTTACTCCTTCAAAACCATCGTGATGTCTTTCATTCCCAGCTTCATTGATGTGTCAACTACAGCTAAACAGAAGTAAAAGCACATTACTTTGATTCAATGGAACACTACCCCTTTGTTTTGGGTGAAATATTGTAGGGGCTCCGAACCTTGGTGGTGTTGAGATTTACTAGAATAGTTAGCTTTGGGGACTACTACTGGATAAATAAATATCTTATTTGCAATTAAGAATGAATATGAAAACATATATGTTTGATCTATGGCTAAAATTCTGTACTGTTGATCTGTGATTAGTTGTAAAACGTACTGAAAATATGAAGATGTGATATAGATGTGATCGGCACCAAGCAGCATTTAATGATTGTGGAGTTATTGATTTATGAGACGAAATTGGGACAGTTGAGACAAAAATTTCCAAATTTAAGGTAATATTAGATGAAATTGTGTTGTTAGTATTCAACCTTTTTACAGTGAACTAACTCCATTACAATTTCCATCGAACCACCACAAGATTTATAATTTTCAGTATGATATCTTTATTTTAATGATGTGAAATTTCAATCATTGTTCTTGAATAATATGCGACTATGATTTTACAGATTAACAAATTTTTAAATG

mRNA sequence

ATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACGAATATCTTCTGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCCGCATGGGACGCTCTGGATTTTCTATTCCCAGTGGGACGATATCCTAGGCATCTAATAAGCCTATTTTTCAGATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGCATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGGTGTTTTCTAGATTTGAGAATCCAAAACAGCACAAGTCTTACTAGGCCACAGAAACCAAGTTTGTATATGTACACAAAGACATGTTTTCCCCTCAGGTCATGCTGCCCCCCACTTCCTGTTGGGGGCTGTGTATTGATATCTTTTACTCCTTCAAAACCATCGTGATGTCTTTCATTCCCAGCTTCATTGATGTGTCAACTACAGCTAAACAGAAGTAAAAGCACATTACTTTGATTCAATGGAACACTACCCCTTTGTTTTGGGTGAAATATTGTAGGGGCTCCGAACCTTGGTGGTGTTGAGATTTACTAGAATAGTTAGCTTTGGGGACTACTACTGGATAAATAAATATCTTATTTGCAATTAAGAATGAATATGAAAACATATATGTTTGATCTATGGCTAAAATTCTGTACTGTTGATCTGTGATTAGTTGTAAAACGTACTGAAAATATGAAGATGTGATATAGATGTGATCGGCACCAAGCAGCATTTAATGATTGTGGAGTTATTGATTTATGAGACGAAATTGGGACAGTTGAGACAAAAATTTCCAAATTTAAGGTAATATTAGATGAAATTGTGTTGTTAGTATTCAACCTTTTTACAGTGAACTAACTCCATTACAATTTCCATCGAACCACCACAAGATTTATAATTTTCAGTATGATATCTTTATTTTAATGATGTGAAATTTCAATCATTGTTCTTGAATAATATGCGACTATGATTTTACAGATTAACAAATTTTTAAATG

Coding sequence (CDS)

ATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACGAATATCTTCTGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCCGCATGGGACGCTCTGGATTTTCTATTCCCAGTGGGACGATATCCTAGGCATCTAATAAGCCTATTTTTCAGATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGCATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGGTGTTTTCTAGATTTGAGAATCCAAAACAGCACAAGTCTTACTAG

Protein sequence

MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIDNSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRDLFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLHYLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPRHLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY

Homology

[Close]

BLAST of Carg12333-RA vs. NCBI nr
Match: XP_023523135.1 (uncharacterized protein LOC111787353 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 603.6 bits (1555), Expect = 3.6e-169
Identity = 290/291 (99.66%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60
           MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID
Sbjct: 68  MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 127

Query: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120
           NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD
Sbjct: 128 NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 187

Query: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180
           LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH
Sbjct: 188 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 247

Query: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240
           YLSHLTVLQG+ELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR
Sbjct: 248 YLSHLTVLQGLELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 307

Query: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 292
           HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY
Sbjct: 308 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 358

[Close]

BLAST of Carg12333-RA vs. NCBI nr
Match: XP_022948700.1 (uncharacterized protein LOC111452293 isoform X1 [Cucurbita moschata])

HSP 1 Score: 602.4 bits (1552), Expect = 7.9e-169
Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60
           MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID
Sbjct: 68  MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 127

Query: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120
           NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD
Sbjct: 128 NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 187

Query: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180
           LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH
Sbjct: 188 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 247

Query: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240
           YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR
Sbjct: 248 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 307

Query: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 292
           HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSR ENPKQHKSY
Sbjct: 308 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRLENPKQHKSY 358

[Close]

BLAST of Carg12333-RA vs. NCBI nr
Match: XP_022948701.1 (uncharacterized protein LOC111452293 isoform X2 [Cucurbita moschata])

HSP 1 Score: 602.4 bits (1552), Expect = 7.9e-169
Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60
           MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID
Sbjct: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60

Query: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120
           NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD
Sbjct: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120

Query: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180
           LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH
Sbjct: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180

Query: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240
           YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR
Sbjct: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240

Query: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 292
           HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSR ENPKQHKSY
Sbjct: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRLENPKQHKSY 291

[Close]

BLAST of Carg12333-RA vs. NCBI nr
Match: XP_022998065.1 (uncharacterized protein LOC111492822 isoform X2 [Cucurbita maxima])

HSP 1 Score: 600.9 bits (1548), Expect = 2.3e-168
Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60
           MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID
Sbjct: 32  MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 91

Query: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120
           NSDEVHLRNSAALVQGATNIFWLDIQANT RFKSLFHYLLEEVAFQPVRLNKIPIQVQRD
Sbjct: 92  NSDEVHLRNSAALVQGATNIFWLDIQANTSRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 151

Query: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180
           LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH
Sbjct: 152 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 211

Query: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240
           YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR
Sbjct: 212 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 271

Query: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 292
           HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY
Sbjct: 272 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 322

[Close]

BLAST of Carg12333-RA vs. NCBI nr
Match: XP_022998066.1 (uncharacterized protein LOC111492822 isoform X3 [Cucurbita maxima])

HSP 1 Score: 600.9 bits (1548), Expect = 2.3e-168
Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60
           MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID
Sbjct: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60

Query: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120
           NSDEVHLRNSAALVQGATNIFWLDIQANT RFKSLFHYLLEEVAFQPVRLNKIPIQVQRD
Sbjct: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTSRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120

Query: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180
           LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH
Sbjct: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180

Query: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240
           YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR
Sbjct: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240

Query: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 292
           HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY
Sbjct: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 291

[Close]

BLAST of Carg12333-RA vs. TAIR10
Match: AT5G59960.1 (unknown protein)

HSP 1 Score: 466.1 bits (1198), Expect = 1.6e-131
Identity = 219/286 (76.57%), Postives = 249/286 (87.06%), Query Frame = 0


Query: 2   ENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIDN 61
           E   DGPLCF+DVLADYYV+V E GK ILDL+V+LWSQSF  HIF+LLFHKWLFE+E+DN
Sbjct: 74  EADADGPLCFFDVLADYYVKVSERGKDILDLMVQLWSQSFASHIFSLLFHKWLFEVELDN 133

Query: 62  SDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRDL 121
             E+ LR S+ALVQGATN+FW+DIQ NT RF+SLF YLLEEVA + +RL KIPIQ QR+L
Sbjct: 134 -QEILLRYSSALVQGATNVFWIDIQTNTRRFQSLFRYLLEEVALEQIRLKKIPIQAQREL 193

Query: 122 FLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLHY 181
           +LLLSRF+  Y+S DKL+ FL+ FP FPNA L+GGP D  VIELTDQ+QKLKVEPVLLHY
Sbjct: 194 YLLLSRFIFFYNSVDKLDSFLRNFPEFPNAFLIGGPGDFLVIELTDQLQKLKVEPVLLHY 253

Query: 182 LSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPRH 241
           LS + +LQGMELRMTTSTRLK CLYSFTSPGGPMYPTRAVRHAAWDALD LFPVGRYPRH
Sbjct: 254 LSQMKILQGMELRMTTSTRLKACLYSFTSPGGPMYPTRAVRHAAWDALDSLFPVGRYPRH 313

Query: 242 LISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQ 288
           LISLFFRLLYPWYWPSSCWNFV+SCI+AV +S+ RL+FSR E P+Q
Sbjct: 314 LISLFFRLLYPWYWPSSCWNFVVSCIKAVLYSIVRLIFSRREKPRQ 358

[Close]

BLAST of Carg12333-RA vs. TrEMBL
Match: tr|A0A1S3C5C9|A0A1S3C5C9_CUCME (uncharacterized protein LOC103497213 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497213 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 5.8e-160
Identity = 275/291 (94.50%), Postives = 281/291 (96.56%), Query Frame = 0


Query: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60
           +E+GM+ PLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEI+
Sbjct: 22  VEHGMNDPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIE 81

Query: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120
           NSDEVHLRNS+ALVQGA NIFWLDIQANT RFKSLFHYLLEEVAFQP RLNKIPIQVQRD
Sbjct: 82  NSDEVHLRNSSALVQGAANIFWLDIQANTTRFKSLFHYLLEEVAFQPARLNKIPIQVQRD 141

Query: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180
           LFLLLSRFLI YDSDDKLE FLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH
Sbjct: 142 LFLLLSRFLIFYDSDDKLESFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 201

Query: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240
           YLS L VLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALD LFPVGRYPR
Sbjct: 202 YLSRLIVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDLLFPVGRYPR 261

Query: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 292
           HLISLFFRLLYPWYWPSSCWNFVISCIRAVF SLFRL+FSRFENPKQHKSY
Sbjct: 262 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFLSLFRLIFSRFENPKQHKSY 312

[Close]

BLAST of Carg12333-RA vs. TrEMBL
Match: tr|A0A1S3C727|A0A1S3C727_CUCME (uncharacterized protein LOC103497213 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497213 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 5.8e-160
Identity = 275/291 (94.50%), Postives = 281/291 (96.56%), Query Frame = 0


Query: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60
           +E+GM+ PLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEI+
Sbjct: 68  VEHGMNDPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIE 127

Query: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120
           NSDEVHLRNS+ALVQGA NIFWLDIQANT RFKSLFHYLLEEVAFQP RLNKIPIQVQRD
Sbjct: 128 NSDEVHLRNSSALVQGAANIFWLDIQANTTRFKSLFHYLLEEVAFQPARLNKIPIQVQRD 187

Query: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180
           LFLLLSRFLI YDSDDKLE FLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH
Sbjct: 188 LFLLLSRFLIFYDSDDKLESFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 247

Query: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240
           YLS L VLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALD LFPVGRYPR
Sbjct: 248 YLSRLIVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDLLFPVGRYPR 307

Query: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 292
           HLISLFFRLLYPWYWPSSCWNFVISCIRAVF SLFRL+FSRFENPKQHKSY
Sbjct: 308 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFLSLFRLIFSRFENPKQHKSY 358

[Close]

BLAST of Carg12333-RA vs. TrEMBL
Match: tr|A0A0A0M0B8|A0A0A0M0B8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G480700 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 1.1e-158
Identity = 272/291 (93.47%), Postives = 281/291 (96.56%), Query Frame = 0


Query: 1   MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEID 60
           +E+GM+ PLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEI+
Sbjct: 68  VEHGMNDPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIE 127

Query: 61  NSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRD 120
           NS+EVHLRNS+ALVQGATNIFWLDIQANT RFKSLFHYLLEEV+FQP RLNKIPIQVQRD
Sbjct: 128 NSEEVHLRNSSALVQGATNIFWLDIQANTTRFKSLFHYLLEEVSFQPARLNKIPIQVQRD 187

Query: 121 LFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 180
           LFLLLSRFLI YDSDDKLE FLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH
Sbjct: 188 LFLLLSRFLIFYDSDDKLESFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLH 247

Query: 181 YLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPR 240
           YLS L VLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALD LFPVGRYPR
Sbjct: 248 YLSRLIVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDLLFPVGRYPR 307

Query: 241 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY 292
           HLISLFFRLLYPWYWPSSCWNFVISCIRAVF SLFRL+FSRFENP QHKS+
Sbjct: 308 HLISLFFRLLYPWYWPSSCWNFVISCIRAVFLSLFRLIFSRFENPNQHKSF 358

[Close]

BLAST of Carg12333-RA vs. TrEMBL
Match: tr|A0A2P4JL23|A0A2P4JL23_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_05974 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 5.1e-132
Identity = 226/283 (79.86%), Postives = 251/283 (88.69%), Query Frame = 0


Query: 2   ENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIDN 61
           E+G+ GPLCF+DVLADYYVQ PESG+PILDLIV LWSQSF CHIFTLLFHKWLFE+++DN
Sbjct: 70  EDGIHGPLCFFDVLADYYVQQPESGQPILDLIVTLWSQSFACHIFTLLFHKWLFEVQLDN 129

Query: 62  SDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRDL 121
           S EV LR S+ALVQGATN+FW+DIQ NT RF+SLFHYLLEEV  +P RLNKIP+Q QRDL
Sbjct: 130 S-EVLLRYSSALVQGATNVFWIDIQTNTRRFQSLFHYLLEEVVLEPTRLNKIPMQAQRDL 189

Query: 122 FLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLHY 181
           +LLLSRF+I Y+S DKLE FLK FP FPNA LVGGPAD FVIEL DQ+QKLKVEPVLLHY
Sbjct: 190 YLLLSRFIIFYNSVDKLESFLKHFPVFPNAFLVGGPADFFVIELADQLQKLKVEPVLLHY 249

Query: 182 LSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPRH 241
           L H+  LQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAW ALDFLFPVG+YPRH
Sbjct: 250 LFHIKALQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWSALDFLFPVGQYPRH 309

Query: 242 LISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFEN 285
           LISLFFRLLYPWYWPSSCWNF++SCI+AV +SL  L + +  N
Sbjct: 310 LISLFFRLLYPWYWPSSCWNFILSCIKAVLYSLLSLEYRQAHN 351

[Close]

BLAST of Carg12333-RA vs. TrEMBL
Match: tr|A0A2P5CD92|A0A2P5CD92_PARAD (K-stimulated pyrophosphate-energized sodium pump protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_162920 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.5e-131
Identity = 223/279 (79.93%), Postives = 253/279 (90.68%), Query Frame = 0


Query: 2   ENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIDN 61
           ++ +DG LCFYDVLADYYV+VPESGKPILDL+V+LWSQSF  HIF LLFHKWLFE+E++N
Sbjct: 70  DDSVDGQLCFYDVLADYYVRVPESGKPILDLLVQLWSQSFASHIFALLFHKWLFEVELNN 129

Query: 62  SDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRDL 121
           S EV LR S+ALVQGATN+FW+DIQ NT RF+SLF YLLEEV  +P RLNKIP+Q QRDL
Sbjct: 130 S-EVLLRYSSALVQGATNVFWIDIQTNTRRFQSLFRYLLEEVVLEPARLNKIPVQAQRDL 189

Query: 122 FLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLHY 181
           +LLLSRF++ Y+S DKLE FLKQFP FPNA LVGGPAD FVIEL DQ+QKLK+EPVLLHY
Sbjct: 190 YLLLSRFILFYNSVDKLESFLKQFPAFPNAFLVGGPADFFVIELADQLQKLKIEPVLLHY 249

Query: 182 LSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPRH 241
           LS + +LQGMELRMTTSTRL++CLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPRH
Sbjct: 250 LSQIKLLQGMELRMTTSTRLRSCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPRH 309

Query: 242 LISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFS 281
           LISLFFRLLYPWYWPSSCWNFV+SCI+A+ +SLF L+FS
Sbjct: 310 LISLFFRLLYPWYWPSSCWNFVMSCIKAILYSLFGLIFS 347

The following BLAST results are available for this feature:

BLAST of Carg12333-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523135.1	3.6e-169	99.66	uncharacterized protein LOC111787353 [Cucurbita pepo subsp. pepo]	[more]
XP_022948700.1	7.9e-169	99.66	uncharacterized protein LOC111452293 isoform X1 [Cucurbita moschata]	[more]
XP_022948701.1	7.9e-169	99.66	uncharacterized protein LOC111452293 isoform X2 [Cucurbita moschata]	[more]
XP_022998065.1	2.3e-168	99.66	uncharacterized protein LOC111492822 isoform X2 [Cucurbita maxima]	[more]
XP_022998066.1	2.3e-168	99.66	uncharacterized protein LOC111492822 isoform X3 [Cucurbita maxima]	[more]

BLAST of Carg12333-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59960.1	1.6e-131	76.57	unknown protein	[more]

BLAST of Carg12333-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12333-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5C9\|A0A1S3C5C9_CUCME	5.8e-160	94.50	uncharacterized protein LOC103497213 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C727\|A0A1S3C727_CUCME	5.8e-160	94.50	uncharacterized protein LOC103497213 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0M0B8\|A0A0A0M0B8_CUCSA	1.1e-158	93.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G480700 PE=4 SV=1	[more]
tr\|A0A2P4JL23\|A0A2P4JL23_QUESU	5.1e-132	79.86	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_05974 PE=4 SV=1	[more]
tr\|A0A2P5CD92\|A0A2P5CD92_PARAD	2.5e-131	79.93	K-stimulated pyrophosphate-energized sodium pump protein OS=Parasponia andersoni...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12333	Carg12333	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12333-RA.three_prime_UTR.1	Carg12333-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12333-RA.CDS.9	Carg12333-RA.CDS.9	CDS
Carg12333-RA.CDS.8	Carg12333-RA.CDS.8	CDS
Carg12333-RA.CDS.7	Carg12333-RA.CDS.7	CDS
Carg12333-RA.CDS.6	Carg12333-RA.CDS.6	CDS
Carg12333-RA.CDS.5	Carg12333-RA.CDS.5	CDS
Carg12333-RA.CDS.4	Carg12333-RA.CDS.4	CDS
Carg12333-RA.CDS.3	Carg12333-RA.CDS.3	CDS
Carg12333-RA.CDS.2	Carg12333-RA.CDS.2	CDS
Carg12333-RA.CDS.1	Carg12333-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12333-RA.exon.9	Carg12333-RA.exon.9	exon
Carg12333-RA.exon.8	Carg12333-RA.exon.8	exon
Carg12333-RA.exon.7	Carg12333-RA.exon.7	exon
Carg12333-RA.exon.6	Carg12333-RA.exon.6	exon
Carg12333-RA.exon.5	Carg12333-RA.exon.5	exon
Carg12333-RA.exon.4	Carg12333-RA.exon.4	exon
Carg12333-RA.exon.3	Carg12333-RA.exon.3	exon
Carg12333-RA.exon.2	Carg12333-RA.exon.2	exon
Carg12333-RA.exon.1	Carg12333-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12333-RA	Carg12333-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45099	FAMILY NOT NAMED	coord: 2..286