Carg12333 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGGTGGGTGAATTTGCACCATGCCTTTTCTTTACGCAGATGTGATTTTCCATTTCCATTTCTTTTTTTTTTTTATTGATAATGAAATAATTTGATATTTTCTTGGCATTTTCTCGTGGTTTTCATCTCAAATTTATTTAAGAAGTTACCCTCCATCTCGATTCCCTTGTTTCTATAAATAACTATTCTGTGTTTAAATGAATTCTCGTTGTATTATTATCGTCATGTAAAACTTGTTCTGTTTTCAATTGGTTTTGGAATTTGTCTAAACATGTTTGCCCATGTTGCTATCTTCTTCTTTTTCTTCTATTTTATTAGAAAGATTTGGTGACTGATGCTGATCCATCTTGCAGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACGAATATCTTCTGGTATGGATTTATCAACTTGTTGCAAATACCTGTTTTATACATCATCTGATCTTGATATAGATCACAATCATGCGAAGCTTTTTCATTATTCTTACTTTTGTCTTGCACGGTGGCACCAAAGCCTGTCTTAAAATATATTATGCTTTGTTGGCTAAGTACAGAGTCGCTGATAAAATGTACTATTAAGTTTTTTAGCAAGCGTTCTTAATCGTTCATGGTATTTCAATGTTAGATTAAAAGAAGCATGGATGCAAGACATTTACACTTCTCTGTTGATATATAGATGTCTTCTAGGATATATGGTTCTGATACGTACCGATGGTTGATTCTCATGTTGCAAATTTGTTTTAGTTTATTATATTTCACTTGAAAGATAATGTAAAAGAAGTTGAAAAATTAGTTGCCTGCACTATACAGTTTTATCAAAATATTTGACACATTAAAACAGATTAAGATGACAAAAAATTAGTTGCTATCTCTTATGAGACAATATACCGTGTTTCAAAATATTTGAAGAAATTGAGACCAACTTATCTTTTTCCTAAATGATTTAATATCTTGACATGAAATTTAAAAAGTACCTATGCATTTATATTTATTACATGTTTGTAGAAACAAGTTTGATACTTTTCACTCTTAATTTTTATTATTTTTTGTACTTTCATTTTATGTCCATCAATTTCTAGAAGTAGACAGATAAAAGTTCATACACTTGGTGTCCAATAATTATTTGAGATATATTCTGGAGTGTCCATATTTGTCTATAATGTTTTGCCATGTGTTGAACAAATATGGGGCTCGTACAAATGCACTAGAGTATCCAATGTATGTCAATTGTGCTTAACGTTAGAATGTCAGCGTGTTCAATACATGTTGGACACACATTTTGTCTTGACTCGACTGCCCGTTGTATTTGCTAATTTACATTGGCATGGCATTTCTTTAGCTTCCAATTTTCCTTTTGAACATAAAGAGTTTTTTGTATTCATGTGTGAGTACTAATCATCCACAAATTAGATCCATTTCCAGTTCAGACACTTTAACCCATGAACAAGTGCACCCGTTATGTTAGGGTCTCTCTTGCATTGATGGAGAGGGCATTCGCTTCATTGTGATTAATGACTGTTAGGAGCATCTGATCATGAGTTATCCCATTGAGGAATTGAAACTTCCAAACTGGAGTTAGCATCATATACACGAGTATTTCATTCCATACAGCTGCTGACTTCATCTTTTATGTTCCTCATTTTAAACATGCAATGAAAACGATATTTTGGTATCATCGTAATAACCTTTGTATGCTGATTCAGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATGTAAGAGTTTGGTCTAGAATTTTTTTTTTTTTTTTTCCTTTGCCCTTCTTTTGATGCCCTGTGTTCAGTATTTTGTGCTAACCCCCCTTCATATCAATGTTCAGTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTAGAGTTTAAAGTTTATACTTAATTTTGCATGATAAAAGTTATTTATTATAATCTAAAACGTTTTACAACAATTCAGGTAGTGCCATTAATGCGACTGTTTTCAAGAGAATTATTTTGTTTTTCTTGAATATTGTTTTGTTATTGACTCCTTTCTTTCTTCTCCTCGCCCCCTCCCTCTTTTTCTCGTTTTTCTTTTTTCTCCATGGCAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGGTGAGCTTATCAATTTTTAAGGTGACTTTTTACCCACTAAGATTTTGTTACTTGGGAGCCCATCTGTATATAATAATCCGTTATGCTTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGGTATTGACATGTAATGTAGCACCAAAATTCTATTGTCGAGTCTTTTTGTTTAAACAAATATTTAGATGAACATGTATTTAAGTTTCTTTAGTACTTTTGTATCATGAAATAGCTTGTTTTGCTACTATCATTATTATATACATCTGCATTGGTCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGTAATTGGCTAACATCATTTCTGGTCAACATTTCTTATCGTAATTGTTCTAATCAACGTCATTAATTTATATAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCCGCATGGGACGCTCTGGATTTTCTATTCCCAGTAAGTTTGAATGGCCCAAAACTCATTGCTCTATTAACAACTTCTAAGCATGCTCTTTTATAGTTTTAACTTCGATGACTTCAATGTTTCTCCAACCCTTCGTCTGACGCCTGGTGTTACATGAATCATGAAATATTAACCAAAAAAGAATGTCGGTTAAACTATTCTCCTTCCCGGTAACTAGACATGGAAACCGAAAAAACACTCTAGATTAGAGCACCTCCGTATTTTAGAAGTACTTTGTAATCACACTTTAGCATTGTTATGCTGAGAAAATCGAAAAATTTTGATGAAGGATTTTTGGTACAGGTGGGACGATATCCTAGGCATCTAATAAGCCTATTTTTCAGATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGCATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGGTGTTTTCTAGATTTGAGAATCCAAAACAGCACAAGTCTTACTAGGCCACAGAAACCAAGTTTGTATATGTACACAAAGACATGTTTTCCCCTCAGGTCATGCTGCCCCCCACTTCCTGTTGGGGGCTGTGTATTGATATCTTTTACTCCTTCAAAACCATCGTGATGTCTTTCATTCCCAGCTTCATTGATGTGTCAACTACAGCTAAACAGAAGTAAAAGCACATTACTTTGATTCAATGGAACACTACCCCTTTGTTTTGGGTGAAATATTGTAGGGGCTCCGAACCTTGGTGGTGTTGAGATTTACTAGAATAGTTAGCTTTGGGGACTACTACTGGATAAATAAATATCTTATTTGCAATTAAGAATGAATATGAAAACATATATGTTTGATCTATGGCTAAAATTCTGTACTGTTGATCTGTGATTAGTTGTAAAACGTACTGAAAATATGAAGATGTGATATAGATGTGATCGGCACCAAGCAGCATTTAATGATTGTGGAGTTATTGATTTATGAGACGAAATTGGGACAGTTGAGACAAAAATTTCCAAATTTAAGGTAATATTAGATGAAATTGTGTTGTTAGTATTCAACCTTTTTACAGTGAACTAACTCCATTACAATTTCCATCGAACCACCACAAGATTTATAATTTTCAGTATGATATCTTTATTTTAATGATGTGAAATTTCAATCATTGTTCTTGAATAATATGCGACTATGATTTTACAGATTAACAAATTTTTAAATG ATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACGAATATCTTCTGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCCGCATGGGACGCTCTGGATTTTCTATTCCCAGTGGGACGATATCCTAGGCATCTAATAAGCCTATTTTTCAGATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGCATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGGTGTTTTCTAGATTTGAGAATCCAAAACAGCACAAGTCTTACTAGGCCACAGAAACCAAGTTTGTATATGTACACAAAGACATGTTTTCCCCTCAGGTCATGCTGCCCCCCACTTCCTGTTGGGGGCTGTGTATTGATATCTTTTACTCCTTCAAAACCATCGTGATGTCTTTCATTCCCAGCTTCATTGATGTGTCAACTACAGCTAAACAGAAGTAAAAGCACATTACTTTGATTCAATGGAACACTACCCCTTTGTTTTGGGTGAAATATTGTAGGGGCTCCGAACCTTGGTGGTGTTGAGATTTACTAGAATAGTTAGCTTTGGGGACTACTACTGGATAAATAAATATCTTATTTGCAATTAAGAATGAATATGAAAACATATATGTTTGATCTATGGCTAAAATTCTGTACTGTTGATCTGTGATTAGTTGTAAAACGTACTGAAAATATGAAGATGTGATATAGATGTGATCGGCACCAAGCAGCATTTAATGATTGTGGAGTTATTGATTTATGAGACGAAATTGGGACAGTTGAGACAAAAATTTCCAAATTTAAGGTAATATTAGATGAAATTGTGTTGTTAGTATTCAACCTTTTTACAGTGAACTAACTCCATTACAATTTCCATCGAACCACCACAAGATTTATAATTTTCAGTATGATATCTTTATTTTAATGATGTGAAATTTCAATCATTGTTCTTGAATAATATGCGACTATGATTTTACAGATTAACAAATTTTTAAATG ATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACGAATATCTTCTGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCCGCATGGGACGCTCTGGATTTTCTATTCCCAGTGGGACGATATCCTAGGCATCTAATAAGCCTATTTTTCAGATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGCATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGGTGTTTTCTAGATTTGAGAATCCAAAACAGCACAAGTCTTACTAG MENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIDNSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRDLFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLHYLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGRYPRHLISLFFRLLYPWYWPSSCWNFVISCIRAVFFSLFRLVFSRFENPKQHKSY
BLAST of Carg12333 vs. NCBI nr
Match: XP_023523135.1 (uncharacterized protein LOC111787353 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 603.6 bits (1555), Expect = 3.6e-169 Identity = 290/291 (99.66%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Carg12333 vs. NCBI nr
Match: XP_022948700.1 (uncharacterized protein LOC111452293 isoform X1 [Cucurbita moschata]) HSP 1 Score: 602.4 bits (1552), Expect = 7.9e-169 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg12333 vs. NCBI nr
Match: XP_022948701.1 (uncharacterized protein LOC111452293 isoform X2 [Cucurbita moschata]) HSP 1 Score: 602.4 bits (1552), Expect = 7.9e-169 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg12333 vs. NCBI nr
Match: XP_022998065.1 (uncharacterized protein LOC111492822 isoform X2 [Cucurbita maxima]) HSP 1 Score: 600.9 bits (1548), Expect = 2.3e-168 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg12333 vs. NCBI nr
Match: XP_022998066.1 (uncharacterized protein LOC111492822 isoform X3 [Cucurbita maxima]) HSP 1 Score: 600.9 bits (1548), Expect = 2.3e-168 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg12333 vs. TAIR10
Match: AT5G59960.1 (unknown protein) HSP 1 Score: 466.1 bits (1198), Expect = 1.6e-131 Identity = 219/286 (76.57%), Postives = 249/286 (87.06%), Query Frame = 0
BLAST of Carg12333 vs. TrEMBL
Match: tr|A0A1S3C5C9|A0A1S3C5C9_CUCME (uncharacterized protein LOC103497213 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497213 PE=4 SV=1) HSP 1 Score: 572.4 bits (1474), Expect = 5.8e-160 Identity = 275/291 (94.50%), Postives = 281/291 (96.56%), Query Frame = 0
BLAST of Carg12333 vs. TrEMBL
Match: tr|A0A1S3C727|A0A1S3C727_CUCME (uncharacterized protein LOC103497213 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497213 PE=4 SV=1) HSP 1 Score: 572.4 bits (1474), Expect = 5.8e-160 Identity = 275/291 (94.50%), Postives = 281/291 (96.56%), Query Frame = 0
BLAST of Carg12333 vs. TrEMBL
Match: tr|A0A0A0M0B8|A0A0A0M0B8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G480700 PE=4 SV=1) HSP 1 Score: 568.2 bits (1463), Expect = 1.1e-158 Identity = 272/291 (93.47%), Postives = 281/291 (96.56%), Query Frame = 0
BLAST of Carg12333 vs. TrEMBL
Match: tr|A0A2P4JL23|A0A2P4JL23_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_05974 PE=4 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 5.1e-132 Identity = 226/283 (79.86%), Postives = 251/283 (88.69%), Query Frame = 0
BLAST of Carg12333 vs. TrEMBL
Match: tr|A0A2P5CD92|A0A2P5CD92_PARAD (K-stimulated pyrophosphate-energized sodium pump protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_162920 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 2.5e-131 Identity = 223/279 (79.93%), Postives = 253/279 (90.68%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |