Carg08172-RA (mRNA) Silver-seed gourd

NameCarg08172-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLate embryogenesis abundant protein, LEA-14
LocationCucurbita_argyrosperma_scaffold_050 : 1122758 .. 1124955 (+)
Sequence length942
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCAAGAGCTCCTTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCCGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTACTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTCAGTTCCTTTTTCTTCCCATTTCTCGTCTTCTTTTGCACGCATTTTCCTCCCGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTAAGTTTTAAAATTATAATTTTAACATTTAGTCTATCAAATTTGTGCTTCCTATTTTTTTTTTTTTTAAAAGTATATTTTATATTTTATGATCCATAAATTAGTGGATTAAAAAAAACAAAAGTTAAAAGGCTAAATTACATAAATTAAATTAAACTGGTAAGGAGAGTTTATAATTAAACTTTTTAATATATTAATAGAAAAAATAAATGTGAGTTAGGAAGCCGCGCTAATAATAGTAGGGGGCAGTGTGTTTTAAGGATTTATTATTATTTATAAAAAAGCTTCAATTTATTAGTTTAATACTTTGAATTATCCATATAGAAATTTGTTATTTTAAAAAAGAAAAACATCCAACTTTTAATTAGCATAATAGACAAAATAAAAGAATAAAAAACAGAAGTACAAAACAATTAGCTAATCAAAATAATTCTCAATCCCAAAAAAAAAAATAATAATAATAAATAAATAGACAAGAATAATTGTGATTTTTTCTTTTAAATTCAATAATTTTTATTGTTGTATTTTTCAATATATATCTATATATGTATATATTTATTAATCATATTTACATTTTGTTTTTCTTCCGTAAAAAAAAAATTATTATTATTTGAAAAGAATAAAATTAAAATAAAAAAGTATTAAAAAGTCAAAGTGATAAAACATTGGGAAACCGCTTCCGAATAAAACGGTGCCGCTTAGTTGCTTTACGACAAAATGGTGGGGGCCACACCGACCGAATAAAACTGCTTTGTTTTTTCAACCCTTTCACATTTGGGAGTTTTTTTTATTTATTATTTTTTAATATTTATTTAACTTATTTACTTTATCCTTTTACTCATCATGTCTTGTCCCTATTTATCTACCTAATATAATAATAATAATATCACCTTTTTTTCCGTACCCATTGTGTTTAATTTTTTCTTTTTTTAGTCGAAGATTCAAATTCTCGTACTCTTTTTTAAATATAAGTATATTCCCATTTCACCATTGAATTGGGTCGAGGAATAATGAATATTTTTTCTTAAAGAAAATGTCAAGCTCAACTACTAGCCATTACTCAGTTTATGTTGTTGCATGATCAAGTTTTATCGTGTTAAGTTCATTATGTTCTTGTGATTCTGTACGAGTTTTTGTTTATGGTTGTGTAGTCAAATATTTTGAATGACGACAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGA

mRNA sequence

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCAAGAGCTCCTTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCCGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTACTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGA

Coding sequence (CDS)

ATGGAGGAGATGACGTCACGGCCTAATGTGAACTCCCGCAATAACCCCCTGCAACGTCCTCTTCCACCGCCACCGTCGAGAGTAAGAGCAGGACCAAGCAACAACAATCACCGTCCTCTTCCACCCCCACCGTCAAGAGCTCCTTTTAATGTCCAACACGACACTCACCGTTCTCCTCTTCCTTCAATGCCACCGTCCAGGCCGAATTCCGACTCTCAGAATGCTCGCTTTCCGTCTCCGCCCTCGTCGCCACCGTTATCTCGTCGGCAGCATTTTGGTTACGACACGACGTCGTCTTCCTCATCGGCTTCCTTCCGAGGCTGTTGCTGCTGCCTCTGCCTCCTCTTCTCCTTCATCGCTCTCCTCGCTCTCGCGATCGTCCTCGTCGTCGTTCTCGCCGTCAAGCCTAAGAAGCCTCAATTCGATCTCCAGCGAGTCGGTGTTCAATATATGGGGATAACCACTCCGAATCTCTTCTCCTTATCCTCCGCCGATTCACAGACCGTGACAACGCCGACGCCGACAACGACCTCCGCAGCGCTATCGCTCAACATTCGATTGCTGTTCACGGCAGTGAATCCAAACAAGGTCGGAATCAAATACGGGAATTCAAGGTTCACAGTGATGTACCGCGGGATTCCGCTAGGAAAAGCAATAGTGCCTGGATTTTACCAAGAGGCGCACAGCCAGAGAGAAGTGGAGGCAATGATCGCCGTCGATCGAGTGAATCTACTTCAGGCAGACGCCGCCGATTTGATCAGAGACGCGTCGTTGAACGATCGAGTGGAGCTGAGGGTTTTGGGCGAAGTTGGCGCCAGGATCCGCGTATTGGAGTTCGATTCTCCCGGCGTTCAGGTGTCGGTGGATTGCTCGATAGTGATAAGTCCAAGGAATCAGTCGTTGACTTCGAAGCAATGTGGATTTGATGGGTTCAGCTTATGA

Protein sequence

MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSNNNHRPLPPPPSRAPFNVQHDTHRSPLPSMPPSRPNSDSQNARFPSPPSSPPLSRRQHFGYDTTSSSSSASFRGCCCCLCLLFSFIALLALAIVLVVVLAVKPKKPQFDLQRVGVQYMGITTPNLFSLSSADSQTVTTPTPTTTSAALSLNIRLLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL
BLAST of Carg08172-RA vs. NCBI nr
Match: XP_022942979.1 (uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942980.1 uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942981.1 uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942983.1 uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942984.1 uncharacterized protein LOC111447854 [Cucurbita moschata])

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 312/313 (99.68%), Postives = 312/313 (99.68%), Query Frame = 0

Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXRQHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX QHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           XXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD
Sbjct: 181 XXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 313

BLAST of Carg08172-RA vs. NCBI nr
Match: XP_022981995.1 (proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima] >XP_022982003.1 proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima] >XP_022982009.1 proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima] >XP_022982017.1 proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima])

HSP 1 Score: 325.5 bits (833), Expect = 2.0e-85
Identity = 308/313 (98.40%), Postives = 308/313 (98.40%), Query Frame = 0

Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEEMTSRPNVNSRNNP QRPLPPPPSR RAGP XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MEEMTSRPNVNSRNNPPQRPLPPPPSRARAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXRQHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXX  RQHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXSRRQHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240
           XXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD
Sbjct: 181 XXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVD 240

Query: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300
           RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS
Sbjct: 241 RVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQS 300

Query: 301 LTSKQCGFDGFSL 314
           LTSKQCGFDGFSL
Sbjct: 301 LTSKQCGFDGFSL 313

BLAST of Carg08172-RA vs. NCBI nr
Match: XP_023517250.1 (uncharacterized protein LOC111781071 [Cucurbita pepo subsp. pepo] >XP_023517259.1 uncharacterized protein LOC111781071 [Cucurbita pepo subsp. pepo] >XP_023517266.1 uncharacterized protein LOC111781071 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.1 bits (819), Expect = 8.4e-84
Identity = 309/315 (98.10%), Postives = 309/315 (98.10%), Query Frame = 0

Query: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAGPSXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEEMTSRPNVNSRNNPLQRPLPPPPSRVRA  SXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MEEMTSRPNVNSRNNPLQRPLPPPPSRVRAVASXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXRQHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXX  RQHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXSRRQHFGYDTXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSL--XXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSL  XXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXPQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIA 240
           XXXXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIA
Sbjct: 181 XXXXXXXXXLFTAVNPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIA 240

Query: 241 VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRN 300
           VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRN
Sbjct: 241 VDRVNLLQADAADLIRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRN 300

Query: 301 QSLTSKQCGFDGFSL 314
           QSLTSKQCGFDGFSL
Sbjct: 301 QSLTSKQCGFDGFSL 315

BLAST of Carg08172-RA vs. NCBI nr
Match: XP_004140800.1 (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus] >KGN57549.1 hypothetical protein Csa_3G209460 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 6.9e-70
Identity = 168/175 (96.00%), Postives = 171/175 (97.71%), Query Frame = 0

Query: 139 PQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 198
           PQFDLQRVGVQYMGIT PNLFSL  XXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG
Sbjct: 128 PQFDLQRVGVQYMGITAPNLFSL--XXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 187

Query: 199 IKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASL 258
           IKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVDRVNLLQADAADLIRDASL
Sbjct: 188 IKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDASL 247

Query: 259 NDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           NDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL
Sbjct: 248 NDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 300

BLAST of Carg08172-RA vs. NCBI nr
Match: XP_008456109.1 (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 6.9e-70
Identity = 161/175 (92.00%), Postives = 164/175 (93.71%), Query Frame = 0

Query: 139 PQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 198
           PQFDLQRVGVQYMGIT PNLFSL     XXXXXXXXXXXXXXXXX    LFTAVNPNKVG
Sbjct: 128 PQFDLQRVGVQYMGITAPNLFSL--SSSXXXXXXXXXXXXXXXXXNIRLLFTAVNPNKVG 187

Query: 199 IKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASL 258
           IKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVDRVNLLQADAADLIRDASL
Sbjct: 188 IKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDASL 247

Query: 259 NDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           NDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL
Sbjct: 248 NDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 300

BLAST of Carg08172-RA vs. TAIR10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 209.5 bits (532), Expect = 2.9e-54
Identity = 108/175 (61.71%), Postives = 126/175 (72.00%), Query Frame = 0

Query: 139 PQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 198
           PQFDLQ+V V YMGI+ P+                              LFTAVNPNKVG
Sbjct: 71  PQFDLQQVAVVYMGISNPS--------------AVLDPTTASLSLTIRMLFTAVNPNKVG 130

Query: 199 IKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASL 258
           I+YG S FTVMY+G+PLG+A VPGFYQ+AHS + VEA I+VDRVNL+QA AADL+RDASL
Sbjct: 131 IRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAADLVRDASL 190

Query: 259 NDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           NDRVEL V G+VGA+IRV+ FDSPGVQVSV+C I ISPR Q+L  KQCGFDG S+
Sbjct: 191 NDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFDGLSV 231

BLAST of Carg08172-RA vs. TAIR10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 43.5 bits (101), Expect = 2.8e-04
Identity = 30/116 (25.86%), Postives = 54/116 (46.55%), Query Frame = 0

Query: 193 NPNKVGIKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADL 252
           NPN++G  Y +S   + YRG  +G+A +P     A     +   + +    LL      L
Sbjct: 119 NPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLL--SETQL 178

Query: 253 IRDASLNDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGF 309
           + D  +   + L    +V  ++ VL+     VQ S  C + IS  ++++TS+ C +
Sbjct: 179 LSDV-MAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKY 231

BLAST of Carg08172-RA vs. TrEMBL
Match: tr|A0A1S3C355|A0A1S3C355_CUCME (proline-rich receptor-like protein kinase PERK10 OS=Cucumis melo OX=3656 GN=LOC103496146 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.6e-70
Identity = 161/175 (92.00%), Postives = 164/175 (93.71%), Query Frame = 0

Query: 139 PQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 198
           PQFDLQRVGVQYMGIT PNLFSL     XXXXXXXXXXXXXXXXX    LFTAVNPNKVG
Sbjct: 128 PQFDLQRVGVQYMGITAPNLFSL--SSSXXXXXXXXXXXXXXXXXNIRLLFTAVNPNKVG 187

Query: 199 IKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASL 258
           IKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVDRVNLLQADAADLIRDASL
Sbjct: 188 IKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDASL 247

Query: 259 NDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           NDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL
Sbjct: 248 NDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 300

BLAST of Carg08172-RA vs. TrEMBL
Match: tr|A0A0A0L9B0|A0A0A0L9B0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G209460 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.6e-70
Identity = 168/175 (96.00%), Postives = 171/175 (97.71%), Query Frame = 0

Query: 139 PQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 198
           PQFDLQRVGVQYMGIT PNLFSL  XXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG
Sbjct: 128 PQFDLQRVGVQYMGITAPNLFSL--XXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 187

Query: 199 IKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASL 258
           IKYG+SRFTVMYRGIPLGKAIVPGFYQEAHS+REVEA IAVDRVNLLQADAADLIRDASL
Sbjct: 188 IKYGDSRFTVMYRGIPLGKAIVPGFYQEAHSEREVEATIAVDRVNLLQADAADLIRDASL 247

Query: 259 NDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           NDRVELRVLGEVGARIRVL+FDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL
Sbjct: 248 NDRVELRVLGEVGARIRVLDFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 300

BLAST of Carg08172-RA vs. TrEMBL
Match: tr|A0A1U8LQD8|A0A1U8LQD8_GOSHI (uncharacterized protein LOC107928886 OS=Gossypium hirsutum OX=3635 GN=LOC107928886 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60
Identity = 126/175 (72.00%), Postives = 137/175 (78.29%), Query Frame = 0

Query: 139 PQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 198
           PQFDLQ+VGVQYMGI+T N  SL                          LFTAVNPNKVG
Sbjct: 75  PQFDLQQVGVQYMGISTSNPSSL----DGTSTAVSPSPTTASLSLTIHLLFTAVNPNKVG 134

Query: 199 IKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASL 258
           IKYG SRFTVMYRGIPLGKA VPGFYQEAHS R VEA IAVDR NL+QADAADLIRDASL
Sbjct: 135 IKYGESRFTVMYRGIPLGKASVPGFYQEAHSTRNVEATIAVDRANLMQADAADLIRDASL 194

Query: 259 NDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           +DRV+LRVLG+VGA+IRVL+FDSPGVQVSVDC+IVISPR QS+T KQCGFDG S+
Sbjct: 195 SDRVQLRVLGDVGAKIRVLDFDSPGVQVSVDCAIVISPRKQSITDKQCGFDGLSV 245

BLAST of Carg08172-RA vs. TrEMBL
Match: tr|A0A0D2QY00|A0A0D2QY00_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G001400 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60
Identity = 141/175 (80.57%), Postives = 152/175 (86.86%), Query Frame = 0

Query: 139 PQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 198
           PQFDLQ+VGVQYMGI+T N  SL       XXXXXXXXXXXXXXX    LFTAVNPNKVG
Sbjct: 75  PQFDLQQVGVQYMGISTSNPSSL----DGTXXXXXXXXXXXXXXXTIHLLFTAVNPNKVG 134

Query: 199 IKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASL 258
           IKYG SRFTVMYRGIPLGKA VPGFYQEAHS R VEA IAVDR NL+QADAADLIRDASL
Sbjct: 135 IKYGESRFTVMYRGIPLGKASVPGFYQEAHSTRNVEATIAVDRANLMQADAADLIRDASL 194

Query: 259 NDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           +DRV+LRVLG+VGA+IRVL+FDSPGVQVSVDC+IVISPR QS+T KQCGFDG S+
Sbjct: 195 SDRVQLRVLGDVGAKIRVLDFDSPGVQVSVDCAIVISPRKQSITDKQCGFDGLSV 245

BLAST of Carg08172-RA vs. TrEMBL
Match: tr|A0A2P5VSS0|A0A2P5VSS0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA38867 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60
Identity = 126/175 (72.00%), Postives = 137/175 (78.29%), Query Frame = 0

Query: 139 PQFDLQRVGVQYMGITTPNLFSLXXXXXXXXXXXXXXXXXXXXXXXXXXLFTAVNPNKVG 198
           PQFDLQ+VGVQYMGI+T N  SL                          LFTAVNPNKVG
Sbjct: 75  PQFDLQQVGVQYMGISTSNPSSL----DGTSTAVSPSPTTASLSLTIHLLFTAVNPNKVG 134

Query: 199 IKYGNSRFTVMYRGIPLGKAIVPGFYQEAHSQREVEAMIAVDRVNLLQADAADLIRDASL 258
           IKYG SRFTVMYRGIPLGKA VPGFYQEAHS R VEA IAVDR NL+QADAADLIRDASL
Sbjct: 135 IKYGESRFTVMYRGIPLGKASVPGFYQEAHSTRNVEATIAVDRANLMQADAADLIRDASL 194

Query: 259 NDRVELRVLGEVGARIRVLEFDSPGVQVSVDCSIVISPRNQSLTSKQCGFDGFSL 314
           +DRV+LRVLG+VGA+IRVL+FDSPGVQVSVDC+IVISPR QS+T KQCGFDG S+
Sbjct: 195 SDRVQLRVLGDVGAKIRVLDFDSPGVQVSVDCAIVISPRKQSITDKQCGFDGLSV 245

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022942979.11.4e-8699.68uncharacterized protein LOC111447854 [Cucurbita moschata] >XP_022942980.1 unchar... [more]
XP_022981995.12.0e-8598.40proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima] >XP_02298200... [more]
XP_023517250.18.4e-8498.10uncharacterized protein LOC111781071 [Cucurbita pepo subsp. pepo] >XP_023517259.... [more]
XP_004140800.16.9e-7096.00PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis sativus] >K... [more]
XP_008456109.16.9e-7092.00PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT2G01080.12.9e-5461.71Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G54200.12.8e-0425.86Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C355|A0A1S3C355_CUCME4.6e-7092.00proline-rich receptor-like protein kinase PERK10 OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A0A0L9B0|A0A0A0L9B0_CUCSA4.6e-7096.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G209460 PE=4 SV=1[more]
tr|A0A1U8LQD8|A0A1U8LQD8_GOSHI3.3e-6072.00uncharacterized protein LOC107928886 OS=Gossypium hirsutum OX=3635 GN=LOC1079288... [more]
tr|A0A0D2QY00|A0A0D2QY00_GOSRA3.3e-6080.57Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G001400 PE=4 ... [more]
tr|A0A2P5VSS0|A0A2P5VSS0_GOSBA3.3e-6072.00Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA38867 PE=4 SV... [more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg08172Carg08172gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg08172-RA.exon.1Carg08172-RA.exon.1exon
Carg08172-RA.exon.2Carg08172-RA.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg08172-RA.CDS.1Carg08172-RA.CDS.1CDS
Carg08172-RA.CDS.2Carg08172-RA.CDS.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg08172-RACarg08172-RA-proteinpolypeptide


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 191..290
e-value: 1.2E-10
score: 41.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..103
NoneNo IPR availablePANTHERPTHR31234FAMILY NOT NAMEDcoord: 87..312
NoneNo IPR availablePANTHERPTHR31234:SF8EXPRESSED PROTEINcoord: 87..312