Carg07975-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTAAGTTTTTCTCTCCAATATAGCGCTTTATCTGCTCAAATTGATTCCGGTTTTGCGTTGATTTATATGTTTGGTTGTTTTTGGGAGGAAACCCAGAGATTTAAGGAGTAGGTGTCGGAGAAGCTAGCGAAGGATCGTGAGACGATTGTGGAGGTTTGCTCGAAGTTTATTGTTTTTTATTGATTTTCGAAACTTTTAGGTTGAAAATGTTGTGATTCGTTCGTTGGGTGATTTGAATTTTGGATGCCCTTGTTTTGGGTTGAAGAATATGTCTGAGCAGCTACCTGTTTGAGAAAATTTGTGAATGAGGCGACTGTTTGATTGCAGAGTTATTTGAGTTTTTTTTGTGCTTTTGAGTTATCATGGCTTGAGAATTATTTCCCATAGGTTCAATAATTAAGCCCTGAGAAAACATCGGACCTGCCAATATAGCTACAGAACTAGTACTGTTTCCAAGACAGCTTCCATTAATTGCGCAGAAATTTTCTGAATGTTTGACCAGTGCTGCCATTATTGATATGCTTCTTGTATTTTGATTTTTCAAATCAAAACTGAAATGAAGATTCCAATTTGAATTCAGTTGTCCGAATTTATGTGATAGTCTTAACATGAAAGTATGTACTTCCAAGTTGTAATATCAGATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCGATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGTTCATGATTGGAATTCGAAAAGAGGGCTTAAATGATCTGTTTTTTCTAGTTACATTTGTGAAGATCCTTGTATTTTGTATTGAGATTTTCTGTTCTTTTTGTTGTTGCAGGCAGATGATGAAGGAAAAACTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGGTTTTACACTGAATTGGAAATTTGGATGCTCATTTTCATGCTCTATATGAATCTTCTAACTTCCACAATGAGCATCTTAAATCAAGCTCCACTATTCTGTCGTATCAACCACACTTGCTTGTCATGATCAAGAAAAAAGGGTTGAACATAAAATCAGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGGTGTTCTGATGCGATGTCTTTCATGTTTGACTACCTGCAATGTTTATTTCACAGAGATTATTGGTATGATTTTATCTTCAAAAAATCACTTCAAGTTGCCAAGGATCTCAATCACCATCATATTTGACTTTTTTCATTTTCTTTTGCAGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGA ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTAAGTTTTTCTCTCCAATATAGCGCTTTATCTGCTCAAATTGATTCCGAAAACATCGGACCTGCCAATATAGCTACAGAACTAGTACTGTTTCCAAGACAGCTTCCATTAATTGCGCAGAAATTTTCTGAATGTTTGACCAGTGCTGCCATTATTGATATGCTTCTTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCGATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAACTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGGTGTTCTGATGCGATGTCTTTCATGTTTGACTACCTGCAATGTTTATTTCACAGAGATTATTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGA ATGGGGCGGGTGCTCTACGGTTGTGCTCTTGTCTTGGTTTCTCCCGCCAAGATCTCATGTTTTAACGGTCTTCTTCATCCAACATTTTGTCCTTTCCCTTCTCGTGTAACCTTCGTCAATTGTAACTTAACTTTGTCCGTCGGTTACAGAAGCAATCCGATCGTGGCCGAGTATGTATGCCTAGATCCGATAGCGGAATTTGTAGTAGTCGTAAGTTTTTCTCTCCAATATAGCGCTTTATCTGCTCAAATTGATTCCGAAAACATCGGACCTGCCAATATAGCTACAGAACTAGTACTGTTTCCAAGACAGCTTCCATTAATTGCGCAGAAATTTTCTGAATGTTTGACCAGTGCTGCCATTATTGATATGCTTCTTATATTTGGTGAATATTGCATGTGGAGTACGGAGGTTCTGGGACATTATTGGTGGAGCCTTTCACCCAAAATGGTTATTGCTCTCGATGAGGGGAAACTACCAGGAGCGCCATTTGCCTCAAGAACTTCGATCCTTTCAGCTCAAAATCATCTAGCAGATGATGAAGGAAAAACTGTATGCTTCATCACAAAGATTCTCCAATACAGTGTCAATTCCATTGATATCTTTGTTGCTATACACATGACTTATTTCTCTCAATACATGAATCATTCTGGGGCTGTGCTGGCAGCTTCAGAAATGCTCTGCAATGATGGTCTCCAAGCCTTTGGCCTCGCTGCAGTGGCGTTTGCTGCTGGTGTTCTGATGCGATGTCTTTCATGTTTGACTACCTGCAATGTTTATTTCACAGAGATTATTGTCATCTGCTGTGATTCAAAAGGAAACAAATCTGGTTACCTGCTGGCTATTTTCAGTCTCATCTCCGGCAGCCGGCTTCTCCGGCTTCCTCTCCGACTCCGGCAATTGCTTCTTGGATTTTGCATACTTTTTAGCTCGCAACACCTTTATAACCTCTGCAAATTCCAACAAAACGTCAAAAGGGCTGAACTAAAACAGAAGGAAATGAAAGAACTTCAAAAAGATCAAAGAGGCACCATACCCTGA MGRVLYGCALVLVSPAKISCFNGLLHPTFCPFPSRVTFVNCNLTLSVGYRSNPIVAEYVCLDPIAEFVVVVSFSLQYSALSAQIDSENIGPANIATELVLFPRQLPLIAQKFSECLTSAAIIDMLLIFGEYCMWSTEVLGHYWWSLSPKMVIALDEGKLPGAPFASRTSILSAQNHLADDEGKTVCFITKILQYSVNSIDIFVAIHMTYFSQYMNHSGAVLAASEMLCNDGLQAFGLAAVAFAAGVLMRCLSCLTTCNVYFTEIIVICCDSKGNKSGYLLAIFSLISGSRLLRLPLRLRQLLLGFCILFSSQHLYNLCKFQQNVKRAELKQKEMKELQKDQRGTIP
BLAST of Carg07975-RA vs. NCBI nr
Match: XP_023553226.1 (uncharacterized protein LOC111810699 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43 Identity = 114/221 (51.58%), Postives = 124/221 (56.11%), Query Frame = 0
BLAST of Carg07975-RA vs. NCBI nr
Match: XP_022151033.1 (protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia]) HSP 1 Score: 104.8 bits (260), Expect = 6.2e-19 Identity = 76/182 (41.76%), Postives = 95/182 (52.20%), Query Frame = 0
BLAST of Carg07975-RA vs. NCBI nr
Match: XP_008446243.1 (PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo]) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16 Identity = 75/182 (41.21%), Postives = 94/182 (51.65%), Query Frame = 0
BLAST of Carg07975-RA vs. NCBI nr
Match: XP_004135230.1 (PREDICTED: uncharacterized protein LOC101211725 isoform X1 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 1.6e-14 Identity = 74/182 (40.66%), Postives = 92/182 (50.55%), Query Frame = 0
BLAST of Carg07975-RA vs. NCBI nr
Match: XP_023513712.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513720.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 89.0 bits (219), Expect = 3.5e-14 Identity = 74/184 (40.22%), Postives = 88/184 (47.83%), Query Frame = 0
BLAST of Carg07975-RA vs. TrEMBL
Match: tr|A0A1S3BEK8|A0A1S3BEK8_CUCME (uncharacterized protein LOC103489034 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489034 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 75/182 (41.21%), Postives = 94/182 (51.65%), Query Frame = 0
BLAST of Carg07975-RA vs. TrEMBL
Match: tr|A0A1S3BF95|A0A1S3BF95_CUCME (uncharacterized protein LOC103489034 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489034 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-09 Identity = 49/91 (53.85%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of Carg07975-RA vs. TrEMBL
Match: tr|A0A1S3BEL0|A0A1S3BEL0_CUCME (uncharacterized protein LOC103489034 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489034 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-09 Identity = 49/91 (53.85%), Postives = 55/91 (60.44%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
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