Carg06884-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCAACTTTCAAAAAGAATCGTGTTGAAAAGATTGTTGAGATACAATTCGAAGCTTAATTGCTCGAGGAACAAATTTTCTCCGTCTCTTGTTCGAGGAGAATAATATTAAGGTCTCTGAGAATGGCGAGAGATAGCTGCTTGGCTCGAGTTACTGCGGGAGTTGCCGTTGGTGGTGCTGTAGGTGGAGCCGTCGGTAAGGAAACCCTAAATTTTCTTCATAGTTCTAATGCCTGTTGTCTTCTTATATATCATTGATATTCCCGTTTTTCTTTCGTCTCTCGACTTCCGAATTTCGGTTATGATTTGATCGTTGTTCCGCTTTCTCAGCGACTGATATTTGGTCAAGTGGTATAGGATTTGTTGGATTAAAGAGTTTGCATACGCAGGAAGCTAAATATTTGGTCAAGTTGCGCCCTTGCATCTGTGATTGAACCATGTTTATCAGTGTTAATGTACTACTAAGAAATATACCGCTGTGAAGCCTTGGATATATTTAATTCTTCCATCTTATCTTTCATATTAAAGCTACGTTTCCTTCGGATTTTATAAAATAAGGCTTTATTTGTTGGATAATATCACTTGCTGGTGGACATAGTTTTTATTGTGTAGAAAGAGTTCTTAGCTTTTTAGGGCCCATCGTAATGAATATTTTGATTGAACTGCTGTAGATTTAACCTGTCAAGTATGGAGTCAACTAATCTTATCTTTGGGGTCTGTTGTACTCCATTGGCCTATTTTGTGTATACCTCATAAAGTTCACCGGAACTTGTGTGCTGACTTCCTGAAGCTCAAAGTTTAACCTTATTTAACAAGTAGCAGTGTACTTTTTCAAGAAGCTCCTTATTTTGCTTTCTTCCATTTCAATAGAGTGTCGAGCATTATGAACTGGCCAGTGCCACAACTTTGAAGATATACATCAGTTACGAAATCTCTGTAACCAACAATTCGGGCTATCGTTTCTTGTTTTTTAATATTTAGATTGGACGGCCTTTCTTGTTTAGAGTATCTTACAATCAATGCTGCAATATATTTGTTTCATCAGAATTATGATATGCTTTGGCTAAGGATTCTAGAACTAACTTTTTTTTTTTAATTTTTTTTTTCTCTAGGTGCTGTTTATGGGACTTATGAGGCCATTAGGTTTAAGGTATACTATCTTCTCCGATCCAAATCTTCAAAAAATATGACTTGAAATTCGACCTCGTCTCTCTGCTGTTTTATGATTTTAGTAAGTTACTCATCAAATTATCGCAAATAGTTAATCCTTTTCCATCTGTTTTTGTTTACAATTAATTAACGTCTTATCTAAACATCTTGAAACTAATATGAGATTCCATCTCATCATCATTGGAAATTCTATGAACATGGGAGACTACCCAAAGTTATGTTTCATTAGCTTGGGATCAAAATTTGCAGTCAATCTACTTTAAATTTACTACACATTTAGCCCTTTTAAAAACAAATTTCATGATTTCTTCCATGATTGGTAATTCTTCCTGAGTTTCTATATTTCTTTCTGCAGACAAATGTCTATGCCTTGAACCATTTTGCTCATTTTCTTCATTCTTACTATTCAAGTTTCTGTCATTGAAACCCGAAGATTACAACGTCCTAGTTACCATTTACTTATTTCAACTCCAGGTGATGATAGATGGTAATTAACTGTGGACCAAACTTGCATTTGTTGGTGCAGGTGCCAGGGCTTCTGAAGATCAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGGCTTTTCTTGGGGGCAGGGAGTTTGATACATTGTGGAAAGTCATACTGAATCACAAGTTCCTGAATTTGGATGAGATAATATTGTTTGCTTTTAGTTTCCTTGCTTTTCAACATGAACTTATTGCGGACGGTCATTTGTTTAGTTAAAAGGTTCCGTTTGTTTTAGTTTAAGGAACAAAATGGTCAATTGATGATGCCTTCAGCCCTACTTGGATGTGAAGTTTTCAAGTTTTGTTTGCCCTCATGATTTGTCAATTTAATAAAATATTGTTGTCGCCCATCATTTTTTTAAATGAAAAAGTTTATAAGAGCTCTTTGAAT AATTCAACTTTCAAAAAGAATCGTGTTGAAAAGATTGTTGAGATACAATTCGAAGCTTAATTGCTCGAGGAACAAATTTTCTCCGTCTCTTGTTCGAGGAGAATAATATTAAGGTCTCTGAGAATGGCGAGAGATAGCTGCTTGGCTCGAGTTACTGCGGGAGTTGCCGTTGGTGGTGCTGTAGGTGGAGCCGTCGGTGCTGTTTATGGGACTTATGAGGCCATTAGGTTTAAGGTGCCAGGGCTTCTGAAGATCAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGGCTTTTCTTGGGGGCAGGGAGTTTGATACATTGTGGAAAGTCATACTGAATCACAAGTTCCTGAATTTGGATGAGATAATATTGTTTGCTTTTAGTTTCCTTGCTTTTCAACATGAACTTATTGCGGACGGTCATTTGTTTAGTTAAAAGGTTCCGTTTGTTTTAGTTTAAGGAACAAAATGGTCAATTGATGATGCCTTCAGCCCTACTTGGATGTGAAGTTTTCAAGTTTTGTTTGCCCTCATGATTTGTCAATTTAATAAAATATTGTTGTCGCCCATCATTTTTTTAAATGAAAAAGTTTATAAGAGCTCTTTGAAT ATGGCGAGAGATAGCTGCTTGGCTCGAGTTACTGCGGGAGTTGCCGTTGGTGGTGCTGTAGGTGGAGCCGTCGGTGCTGTTTATGGGACTTATGAGGCCATTAGGTTTAAGGTGCCAGGGCTTCTGAAGATCAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGGCTTTTCTTGGGGGCAGGGAGTTTGATACATTGTGGAAAGTCATACTGA MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFLGAGSLIHCGKSY
BLAST of Carg06884-RA vs. NCBI nr
Match: XP_008449669.1 (PREDICTED: reactive oxygen species modulator 1 [Cucumis melo] >XP_004140202.2 PREDICTED: reactive oxygen species modulator 1 [Cucumis sativus] >XP_022152962.1 reactive oxygen species modulator 1 [Momordica charantia] >XP_022943286.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita moschata] >XP_022986427.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita maxima] >XP_023511835.1 reactive oxygen species modulator 1 [Cucurbita pepo subsp. pepo] >KGN48107.1 hypothetical protein Csa_6G432800 [Cucumis sativus]) HSP 1 Score: 105.5 bits (262), Expect = 7.7e-20 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. NCBI nr
Match: XP_006362315.1 (PREDICTED: reactive oxygen species modulator 1-like [Solanum tuberosum] >XP_015057079.1 PREDICTED: reactive oxygen species modulator 1-like [Solanum pennellii]) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. NCBI nr
Match: XP_023876465.1 (reactive oxygen species modulator 1 [Quercus suber] >POE81171.1 reactive oxygen species modulator 1 [Quercus suber]) HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. NCBI nr
Match: XP_012455136.1 (PREDICTED: reactive oxygen species modulator 1-like isoform X2 [Gossypium raimondii] >XP_016728217.1 PREDICTED: reactive oxygen species modulator 1-like [Gossypium hirsutum] >XP_016699771.1 PREDICTED: reactive oxygen species modulator 1-like [Gossypium hirsutum] >XP_017649162.1 PREDICTED: reactive oxygen species modulator 1-like [Gossypium arboreum] >KHG15555.1 hypothetical protein F383_22847 [Gossypium arboreum] >KJB73084.1 hypothetical protein B456_011G214000 [Gossypium raimondii] >PPR81117.1 hypothetical protein GOBAR_AA39595 [Gossypium barbadense]) HSP 1 Score: 104.4 bits (259), Expect = 1.7e-19 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. NCBI nr
Match: XP_017618573.1 (PREDICTED: reactive oxygen species modulator 1-like [Gossypium arboreum] >XP_022747173.1 reactive oxygen species modulator 1-like [Durio zibethinus]) HSP 1 Score: 104.4 bits (259), Expect = 1.7e-19 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. TAIR10
Match: AT3G07910.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 89.7 bits (221), Expect = 8.0e-19 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 0
BLAST of Carg06884-RA vs. TrEMBL
Match: tr|A0A1S3BLX4|A0A1S3BLX4_CUCME (reactive oxygen species modulator 1 OS=Cucumis melo OX=3656 GN=LOC103491480 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.1e-20 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. TrEMBL
Match: tr|A0A0A0KIA0|A0A0A0KIA0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432800 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.1e-20 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. TrEMBL
Match: tr|A0A0V0GIY8|A0A0V0GIY8_SOLCH (Putative reactive oxygen species modulator 1-like OS=Solanum chacoense OX=4108 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 6.7e-20 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. TrEMBL
Match: tr|M1D379|M1D379_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102579057 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 6.7e-20 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg06884-RA vs. TrEMBL
Match: tr|A0A2P4JKD3|A0A2P4JKD3_QUESU (Reactive oxygen species modulator 1 OS=Quercus suber OX=58331 GN=CFP56_30360 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 8.7e-20 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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