Carg05597-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCCTTCCTTCAGGATTCGAGGTCGAGAAATTGTAGGTTATGGAGGAAATCAAAGCGCCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCAACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTATGATTCCAGATCAATTTCCATGTCATGGTTAATCGATTATAATCTCTGGTAGTTTTGAACGATTTCTCGATCTCTTTTTTTCTGGGTTTTTCTTTGCATCTGGTAAAATGGCGGTTTAGAAGCTTGAAATTTAGGGGAATGTTTGTTTTGGGGAAAGTTTGGTTTTGCTAATTTAGTGTGAGTTCGTTCGTTCTCTATGTTTCGACGAGTTTCTCATTGGCAGTGTATTTGAGACTATTTTGCTGTGGGTTTTCTACTTTCTCTTGAAGGTTTTGAAGACTACCGAGTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGTAAGTGCATTTTGATTCTCATTTGTGGCTTTTGTTCGTTCATTGTGTTCTAACACTTTGCCTCAAGGGAACATTTTTGCATGTTCATATTGTTTGAAATGCGAGTATCTTGGGAGCTAGTTTCAAACTAACGTGGAAGAGAATAAAGGGGGTGTAAAATCACCTAAACTTAGACAATTAGAACACTCTCCTTTTTGGGCCAGCCTTTGGGAGGGGAACACTCATTCGTTTATGTCTCGACAATTGCTTGATGCCAGAATCATCCACCCATGTGCTATATATATCTTTCTCCCAAGTCTCCACATGTTTCGTGGATAATTGGAATTCAGTTCTCCTCTCACAACTGCAAGTAACTGTACACTACTCCAAGGACTACTCCAAGGACTACTCCCAAGCGGTGCCCCATTCATGCTCACCATTTGTCATGTAGGGGTGAAGATTGCTAGATGTGTCACTTGTCTTGCAATCTTGTTCTTGCTTGGTCCAGACATGTCACTTGTCTCATGGTTTATGGTGTTTGTGGCTATCTTTTGGTCTACTTCATCTTCCTTTTGTTAGCTATATAAGATTCCATATTTCTTTTCAAAATTGCACAACATCCTTTGAGGTTGGTTGATGGAGCTTCACTCCATTGAGGTTCTTTTCGTGGATGGTGGATGAGCACCAACTACTTTGGTGTCATCCATTGCTTGTAAAGGTCACCTTTTGCACACACCTTCGTTGTTTTGTGCCTCAATGTGTGAGCACATCATCGTGCAAGTGCAAGTGATCTACCCATTCCATGCACCTGTCCTCTGCACGTCTCTTGTATGTGCAGCCTCCATATGACTCCCTTGCCTTGAGGTTACGCATATGCTGCTTACAAGTGTTGGTGCCTTTGTCCATTGGTGATCTCCCATGCATTACTCCATTGTGTTGTCGCCTATATGCATGAGCCCCCTTTGGTGTGAAGGGCTTAATAAGAATGTCCTGTGTGCCCTTGGACTTCCTGTTTTCTCATGCTCCATCCATTGGCCTTGTGTCAATGTGCCATTGTGCCAATGTTGATATTCAACCTCTCATATCTTGTGTTAATCTTTGTTTGTCTCCCCTTGTCTCTTTCTTCTATTGGCTCTAGTTCTCTATCTCTTACCTCAGTCAGATCTCAAGCACCAAGGGTCTAACATAACAAGGATTTGGCGTTTATCCATGAGAGGAACTTATATGGTCAAAGAAACATACACAGCTAAGAAAAGGGAGATGGAGGAGATCATAGGATAGCCACAAACCCTAGACACAAGGCATGGGACAACGGGTATGTGTGGACCAAGCAAGAACAAAACTGGCATGGGACAACGGGTATGTGTGGACCAAGCAAGAACAAAACGTGTGACAAGTGATACATACCTAGAAATAGGTACAAATATGATACATGGTGAGCATGGATGTGATACCCTTGTATGGATGATACTTTGCAAGCCGAATCTAGTCCTTGGATTTGTGGATAGTTACCTGCAGTTTTCGGAGGAGAGTAACTGAATTTCCATTATGGATGAAACATACGGAGGCTTGGGAGAAAGATAGCGTGCGGGGGATAAATTTTTCATTAAGAAATTTTCCCACAAGGGAGTTCCTTCCTCTTCCCTATAAAAGACGGAATGTACAAGGGGTCCTTTGGTGCGTGTGCAACTTTTATATTATTTTGCTTGCGAATTTTACTGTTCTAAATTCTTAACGGCCTAAGTTGAGGGTGATCTTACACCACTTTTTTCTCTTCCTCTTCAGTCTTTGTGGATGGTCGGTTGACTAAGATAGAACCTTAACTAATGACTAATATGCCTGTATGTCCTAAAATCTGCCTACTAATGTTGATAAATTTCCAGGCCAGCCCTATTGATTCCGTTTGTTTTCTCTTCTATTTGCTGGAATTACTGTAACTCATCCAACCAAACTGTTCAACCCCTCTAGCAATGATATTGTCACTCCTCTTACCCAACATTTAGCTTTAGCTCTTGGCTTTTGAGCTAAGCCCTTGCCCTACTCCAGTTCTATCTCCTTCGACGTGTTTCCTGCAGAAGTTGGATGATTCTGTGATGTTTCTAGCTTGGTAATTTGCGAAGAAAATATTGCCTCAATCATCACCTGCAGTTTAGCATGAAAATCAAGAAAACAACGACATTTAGAGATTCCATGTGAGATCTCACGTTGATTGGAGAGAGGAACGAGTGCCAGCGATGACGCTGGGCCCCGAAGAGAGGTGGATTGTGAGATCCCACCTCGATTGGAGAGGGAAACAAAACATTCTTAACCTCTTCTTAGCAGACGCGTTTTAAAAACCTTAAGGGGAAAGAAGCCTAAAGAAGACAATATCTGCTAGCGGTGGGCTTGGATTGTTACATTCCAACACCCGTGAATTGGAAAGCGTGAGAATACATGGTAGAATTCATGCTCAAGGTTTCTTGATTGACCCCTAGAATCTGCTACCATCTTTTCTGTTGGCTTTCAGCCTTTCTGCTGCCACCTCTATCAAAATCAAATCCCAAATTTGGGAAGAAATTTCTTCACATGGGATTATACAGAAGGGGACAACTATTTTTGAATTGGCTGGACCCACATGCCTTCATGCATGACTCAAACTATTAATTGTGTTGGTTGACACATGAAATTACCACAAAACCAACGAATCTGGAATTCTCAATCTGAGTTAATTCAATGACTGTAATTAACTTTCAAGGAAATGTGTCTGAACATTTGAAACTTGCAGGAATAAAGCTTCTACAGGACATGTATATAATGATGATGGCAACAACTTCAGAATCTCTTTACATCGAAAAGACTAGCAACGTGCTCGATGGTCAGTCCTTATCAGTTGATAATCAAGATCAACGATCCCGGGAGCAACACCATGATGGTAAACAGGGGGGCAAATCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGAAAAAAAATCCCATTGTTTCATCAGAGTCATGATCTGGAACACTTAGAAAAGTAGTATGCTGGGGAAATCTTCTTTGTTATGGTAAGTTTAGAAGAGCATTCAATAGATGAAATAGCTTCCTTCTATTTCTAGTGTGACTATACAATGTATTAGTTTTTAAGTATGAAGATATTAACACGAGCTTCCTTTATCTAATACCTCTGATGATGGGGTTTGGGGTTTCTGTTGAGACAATTCCTGAGATTTGTAAATTTTATTAATCCTGATGATAATTTTATGTAGTCAAAGATATTATTCAAGCCCAATTAGAAGATATTGCTTGTTTTGGTTCATTATGTATCGTCGTCAGCCTCATAGTTTTAAAACGCGGCTAAAGAGAGGTTTTCATACTCTTATAAGGACCCCTCTTTGGA AAAACCCTTCCTTCAGGATTCGAGGTCGAGAAATTGTAGGTTATGGAGGAAATCAAAGCGCCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCAACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTACCGAGTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTACAGGACATGTATATAATGATGATGGCAACAACTTCAGAATCTCTTTACATCGAAAAGACTAGCAACGTGCTCGATGGTCAGTCCTTATCAGTTGATAATCAAGATCAACGATCCCGGGAGCAACACCATGATGGTAAACAGGGGGGCAAATCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGAAAAAAAATCCCATTGTTTCATCAGAGTCATGATCTGGAACACTTAGAAAAGTAGTATGCTGGGGAAATCTTCTTTGTTATGGTAAGTTTAGAAGAGCATTCAATAGATGAAATAGCTTCCTTCTATTTCTAGTGTGACTATACAATGTATTAGTTTTTAAGTATGAAGATATTAACACGAGCTTCCTTTATCTAATACCTCTGATGATGGGGTTTGGGGTTTCTGTTGAGACAATTCCTGAGATTTGTAAATTTTATTAATCCTGATGATAATTTTATGTAGTCAAAGATATTATTCAAGCCCAATTAGAAGATATTGCTTGTTTTGGTTCATTATGTATCGTCGTCAGCCTCATAGTTTTAAAACGCGGCTAAAGAGAGGTTTTCATACTCTTATAAGGACCCCTCTTTGGA ATGGAGGAAATCAAAGCGCCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCAACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTACCGAGTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTACAGGACATGTATATAATGATGATGGCAACAACTTCAGAATCTCTTTACATCGAAAAGACTAGCAACGTGCTCGATGGTCAGTCCTTATCAGTTGATAATCAAGATCAACGATCCCGGGAGCAACACCATGATGGTAAACAGGGGGGCAAATCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGAAAAAAAATCCCATTGTTTCATCAGAGTCATGA MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES
BLAST of Carg05597-RA vs. NCBI nr
Match: XP_022959506.1 (uncharacterized protein LOC111460466 [Cucurbita moschata]) HSP 1 Score: 309.3 bits (791), Expect = 9.7e-81 Identity = 199/204 (97.55%), Postives = 199/204 (97.55%), Query Frame = 0
BLAST of Carg05597-RA vs. NCBI nr
Match: XP_023548253.1 (uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79 Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of Carg05597-RA vs. NCBI nr
Match: XP_023006667.1 (uncharacterized protein LOC111499323 [Cucurbita maxima]) HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77 Identity = 195/204 (95.59%), Postives = 199/204 (97.55%), Query Frame = 0
BLAST of Carg05597-RA vs. NCBI nr
Match: XP_022156104.1 (uncharacterized protein LOC111023072 [Momordica charantia]) HSP 1 Score: 228.0 bits (580), Expect = 2.8e-56 Identity = 144/205 (70.24%), Postives = 161/205 (78.54%), Query Frame = 0
BLAST of Carg05597-RA vs. NCBI nr
Match: XP_008458259.1 (PREDICTED: uncharacterized protein LOC103497729 [Cucumis melo]) HSP 1 Score: 224.9 bits (572), Expect = 2.4e-55 Identity = 116/170 (68.24%), Postives = 128/170 (75.29%), Query Frame = 0
BLAST of Carg05597-RA vs. TAIR10
Match: AT1G01730.1 (unknown protein) HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15 Identity = 77/175 (44.00%), Postives = 100/175 (57.14%), Query Frame = 0
BLAST of Carg05597-RA vs. TrEMBL
Match: tr|A0A1S3C7F7|A0A1S3C7F7_CUCME (uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55 Identity = 116/170 (68.24%), Postives = 128/170 (75.29%), Query Frame = 0
BLAST of Carg05597-RA vs. TrEMBL
Match: tr|A0A0A0K7F0|A0A0A0K7F0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.4e-54 Identity = 117/171 (68.42%), Postives = 128/171 (74.85%), Query Frame = 0
BLAST of Carg05597-RA vs. TrEMBL
Match: tr|F6I612|F6I612_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g02890 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.7e-31 Identity = 83/170 (48.82%), Postives = 104/170 (61.18%), Query Frame = 0
BLAST of Carg05597-RA vs. TrEMBL
Match: tr|A0A2I4E638|A0A2I4E638_9ROSI (uncharacterized protein LOC108986624 OS=Juglans regia OX=51240 GN=LOC108986624 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 4.0e-30 Identity = 84/173 (48.55%), Postives = 112/173 (64.74%), Query Frame = 0
BLAST of Carg05597-RA vs. TrEMBL
Match: tr|C6SYV1|C6SYV1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100306306 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.4e-29 Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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