Carg05597 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05597
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tumor necrosis factor receptor superfamily member 8 like
Location	Cucurbita_argyrosperma_scaffold_046 : 1550180 .. 1554232 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCTTCCTTCAGGATTCGAGGTCGAGAAATTGTAGGTTATGGAGGAAATCAAAGCGCCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCAACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTATGATTCCAGATCAATTTCCATGTCATGGTTAATCGATTATAATCTCTGGTAGTTTTGAACGATTTCTCGATCTCTTTTTTTCTGGGTTTTTCTTTGCATCTGGTAAAATGGCGGTTTAGAAGCTTGAAATTTAGGGGAATGTTTGTTTTGGGGAAAGTTTGGTTTTGCTAATTTAGTGTGAGTTCGTTCGTTCTCTATGTTTCGACGAGTTTCTCATTGGCAGTGTATTTGAGACTATTTTGCTGTGGGTTTTCTACTTTCTCTTGAAGGTTTTGAAGACTACCGAGTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGTAAGTGCATTTTGATTCTCATTTGTGGCTTTTGTTCGTTCATTGTGTTCTAACACTTTGCCTCAAGGGAACATTTTTGCATGTTCATATTGTTTGAAATGCGAGTATCTTGGGAGCTAGTTTCAAACTAACGTGGAAGAGAATAAAGGGGGTGTAAAATCACCTAAACTTAGACAATTAGAACACTCTCCTTTTTGGGCCAGCCTTTGGGAGGGGAACACTCATTCGTTTATGTCTCGACAATTGCTTGATGCCAGAATCATCCACCCATGTGCTATATATATCTTTCTCCCAAGTCTCCACATGTTTCGTGGATAATTGGAATTCAGTTCTCCTCTCACAACTGCAAGTAACTGTACACTACTCCAAGGACTACTCCAAGGACTACTCCCAAGCGGTGCCCCATTCATGCTCACCATTTGTCATGTAGGGGTGAAGATTGCTAGATGTGTCACTTGTCTTGCAATCTTGTTCTTGCTTGGTCCAGACATGTCACTTGTCTCATGGTTTATGGTGTTTGTGGCTATCTTTTGGTCTACTTCATCTTCCTTTTGTTAGCTATATAAGATTCCATATTTCTTTTCAAAATTGCACAACATCCTTTGAGGTTGGTTGATGGAGCTTCACTCCATTGAGGTTCTTTTCGTGGATGGTGGATGAGCACCAACTACTTTGGTGTCATCCATTGCTTGTAAAGGTCACCTTTTGCACACACCTTCGTTGTTTTGTGCCTCAATGTGTGAGCACATCATCGTGCAAGTGCAAGTGATCTACCCATTCCATGCACCTGTCCTCTGCACGTCTCTTGTATGTGCAGCCTCCATATGACTCCCTTGCCTTGAGGTTACGCATATGCTGCTTACAAGTGTTGGTGCCTTTGTCCATTGGTGATCTCCCATGCATTACTCCATTGTGTTGTCGCCTATATGCATGAGCCCCCTTTGGTGTGAAGGGCTTAATAAGAATGTCCTGTGTGCCCTTGGACTTCCTGTTTTCTCATGCTCCATCCATTGGCCTTGTGTCAATGTGCCATTGTGCCAATGTTGATATTCAACCTCTCATATCTTGTGTTAATCTTTGTTTGTCTCCCCTTGTCTCTTTCTTCTATTGGCTCTAGTTCTCTATCTCTTACCTCAGTCAGATCTCAAGCACCAAGGGTCTAACATAACAAGGATTTGGCGTTTATCCATGAGAGGAACTTATATGGTCAAAGAAACATACACAGCTAAGAAAAGGGAGATGGAGGAGATCATAGGATAGCCACAAACCCTAGACACAAGGCATGGGACAACGGGTATGTGTGGACCAAGCAAGAACAAAACTGGCATGGGACAACGGGTATGTGTGGACCAAGCAAGAACAAAACGTGTGACAAGTGATACATACCTAGAAATAGGTACAAATATGATACATGGTGAGCATGGATGTGATACCCTTGTATGGATGATACTTTGCAAGCCGAATCTAGTCCTTGGATTTGTGGATAGTTACCTGCAGTTTTCGGAGGAGAGTAACTGAATTTCCATTATGGATGAAACATACGGAGGCTTGGGAGAAAGATAGCGTGCGGGGGATAAATTTTTCATTAAGAAATTTTCCCACAAGGGAGTTCCTTCCTCTTCCCTATAAAAGACGGAATGTACAAGGGGTCCTTTGGTGCGTGTGCAACTTTTATATTATTTTGCTTGCGAATTTTACTGTTCTAAATTCTTAACGGCCTAAGTTGAGGGTGATCTTACACCACTTTTTTCTCTTCCTCTTCAGTCTTTGTGGATGGTCGGTTGACTAAGATAGAACCTTAACTAATGACTAATATGCCTGTATGTCCTAAAATCTGCCTACTAATGTTGATAAATTTCCAGGCCAGCCCTATTGATTCCGTTTGTTTTCTCTTCTATTTGCTGGAATTACTGTAACTCATCCAACCAAACTGTTCAACCCCTCTAGCAATGATATTGTCACTCCTCTTACCCAACATTTAGCTTTAGCTCTTGGCTTTTGAGCTAAGCCCTTGCCCTACTCCAGTTCTATCTCCTTCGACGTGTTTCCTGCAGAAGTTGGATGATTCTGTGATGTTTCTAGCTTGGTAATTTGCGAAGAAAATATTGCCTCAATCATCACCTGCAGTTTAGCATGAAAATCAAGAAAACAACGACATTTAGAGATTCCATGTGAGATCTCACGTTGATTGGAGAGAGGAACGAGTGCCAGCGATGACGCTGGGCCCCGAAGAGAGGTGGATTGTGAGATCCCACCTCGATTGGAGAGGGAAACAAAACATTCTTAACCTCTTCTTAGCAGACGCGTTTTAAAAACCTTAAGGGGAAAGAAGCCTAAAGAAGACAATATCTGCTAGCGGTGGGCTTGGATTGTTACATTCCAACACCCGTGAATTGGAAAGCGTGAGAATACATGGTAGAATTCATGCTCAAGGTTTCTTGATTGACCCCTAGAATCTGCTACCATCTTTTCTGTTGGCTTTCAGCCTTTCTGCTGCCACCTCTATCAAAATCAAATCCCAAATTTGGGAAGAAATTTCTTCACATGGGATTATACAGAAGGGGACAACTATTTTTGAATTGGCTGGACCCACATGCCTTCATGCATGACTCAAACTATTAATTGTGTTGGTTGACACATGAAATTACCACAAAACCAACGAATCTGGAATTCTCAATCTGAGTTAATTCAATGACTGTAATTAACTTTCAAGGAAATGTGTCTGAACATTTGAAACTTGCAGGAATAAAGCTTCTACAGGACATGTATATAATGATGATGGCAACAACTTCAGAATCTCTTTACATCGAAAAGACTAGCAACGTGCTCGATGGTCAGTCCTTATCAGTTGATAATCAAGATCAACGATCCCGGGAGCAACACCATGATGGTAAACAGGGGGGCAAATCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGAAAAAAAATCCCATTGTTTCATCAGAGTCATGATCTGGAACACTTAGAAAAGTAGTATGCTGGGGAAATCTTCTTTGTTATGGTAAGTTTAGAAGAGCATTCAATAGATGAAATAGCTTCCTTCTATTTCTAGTGTGACTATACAATGTATTAGTTTTTAAGTATGAAGATATTAACACGAGCTTCCTTTATCTAATACCTCTGATGATGGGGTTTGGGGTTTCTGTTGAGACAATTCCTGAGATTTGTAAATTTTATTAATCCTGATGATAATTTTATGTAGTCAAAGATATTATTCAAGCCCAATTAGAAGATATTGCTTGTTTTGGTTCATTATGTATCGTCGTCAGCCTCATAGTTTTAAAACGCGGCTAAAGAGAGGTTTTCATACTCTTATAAGGACCCCTCTTTGGA

mRNA sequence

AAAACCCTTCCTTCAGGATTCGAGGTCGAGAAATTGTAGGTTATGGAGGAAATCAAAGCGCCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCAACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTACCGAGTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTACAGGACATGTATATAATGATGATGGCAACAACTTCAGAATCTCTTTACATCGAAAAGACTAGCAACGTGCTCGATGGTCAGTCCTTATCAGTTGATAATCAAGATCAACGATCCCGGGAGCAACACCATGATGGTAAACAGGGGGGCAAATCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGAAAAAAAATCCCATTGTTTCATCAGAGTCATGATCTGGAACACTTAGAAAAGTAGTATGCTGGGGAAATCTTCTTTGTTATGGTAAGTTTAGAAGAGCATTCAATAGATGAAATAGCTTCCTTCTATTTCTAGTGTGACTATACAATGTATTAGTTTTTAAGTATGAAGATATTAACACGAGCTTCCTTTATCTAATACCTCTGATGATGGGGTTTGGGGTTTCTGTTGAGACAATTCCTGAGATTTGTAAATTTTATTAATCCTGATGATAATTTTATGTAGTCAAAGATATTATTCAAGCCCAATTAGAAGATATTGCTTGTTTTGGTTCATTATGTATCGTCGTCAGCCTCATAGTTTTAAAACGCGGCTAAAGAGAGGTTTTCATACTCTTATAAGGACCCCTCTTTGGA

Coding sequence (CDS)

ATGGAGGAAATCAAAGCGCCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCAACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTACCGAGTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTACAGGACATGTATATAATGATGATGGCAACAACTTCAGAATCTCTTTACATCGAAAAGACTAGCAACGTGCTCGATGGTCAGTCCTTATCAGTTGATAATCAAGATCAACGATCCCGGGAGCAACACCATGATGGTAAACAGGGGGGCAAATCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGAAAAAAAATCCCATTGTTTCATCAGAGTCATGA

Protein sequence

MEEIKAPQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES

Homology

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BLAST of Carg05597 vs. NCBI nr
Match: XP_022959506.1 (uncharacterized protein LOC111460466 [Cucurbita moschata])

HSP 1 Score: 309.3 bits (791), Expect = 9.7e-81
Identity = 199/204 (97.55%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MEEIKAPQSAPLPPXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL 60
           MEEIKAPQSAPLPPXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL
Sbjct: 1   MEEIKAPQSAPLPPXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL 60

Query: 61  EVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQDQ 120
           EVLKT EFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQDQ
Sbjct: 61  EVLKTPEFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQDQ 120

Query: 121 RSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQGANDGQTSGTYIVGGSAFGWNFIAFTG 180
           RSREQHHDGKQ XXXXXXXXXXXXXXXX  EK GANDGQTSGTYIVGGSAFGWNFIAFTG
Sbjct: 121 RSREQHHDGKQGXXXXXXXXXXXXXXXXAPEKHGANDGQTSGTYIVGGSAFGWNFIAFTG 180

Query: 181 TEPVYYGVTKEEFRKKNPIVSSES 205
           TEPVYYGVTKEEFRKKNPIVSSES
Sbjct: 181 TEPVYYGVTKEEFRKKNPIVSSES 204

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BLAST of Carg05597 vs. NCBI nr
Match: XP_023548253.1 (uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MEEIKAPQSAPLPPXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL 60
           MEEIKAPQSAPLPPXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL
Sbjct: 1   MEEIKAPQSAPLPPXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL 60

Query: 61  EVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQDQ 120
           EVLKT EFRNCKAANEIRERIKLLQDMYI+MMATTSESLYIEKTS VLDGQSLSVDNQDQ
Sbjct: 61  EVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSIVLDGQSLSVDNQDQ 120

Query: 121 RSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQGANDGQTSGTYIVGGSAFGWNFIAFTG 180
           RSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQGANDGQTSGTYIVGGSAFGWNFIAFTG
Sbjct: 121 RSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQGANDGQTSGTYIVGGSAFGWNFIAFTG 180

Query: 181 TEPVYYGVTKEEFRKKNPIVSSES 205
           TEPVYYGVTKEEFR+KNPIVSSES
Sbjct: 181 TEPVYYGVTKEEFREKNPIVSSES 204

[Close]

BLAST of Carg05597 vs. NCBI nr
Match: XP_023006667.1 (uncharacterized protein LOC111499323 [Cucurbita maxima])

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 195/204 (95.59%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MEEIKAPQSAPLPPXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL 60
           MEEIKA QSAPLP XXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL
Sbjct: 1   MEEIKASQSAPLPXXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL 60

Query: 61  EVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQDQ 120
           EVLKT EFRNCKAANEIRERIKLLQDMYI+MMATTSESLYIEKTSNVLDGQS+SVDNQDQ
Sbjct: 61  EVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQ 120

Query: 121 RSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQGANDGQTSGTYIVGGSAFGWNFIAFTG 180
           RSREQ+HDGKQ XXXXXXXXXXXXXXXXX EKQGANDGQTSGTYIVGGSAFGWNFIAFTG
Sbjct: 121 RSREQYHDGKQGXXXXXXXXXXXXXXXXXPEKQGANDGQTSGTYIVGGSAFGWNFIAFTG 180

Query: 181 TEPVYYGVTKEEFRKKNPIVSSES 205
           TEPVYYGVTKEEFR+KNPIVSSES
Sbjct: 181 TEPVYYGVTKEEFREKNPIVSSES 204

[Close]

BLAST of Carg05597 vs. NCBI nr
Match: XP_022156104.1 (uncharacterized protein LOC111023072 [Momordica charantia])

HSP 1 Score: 228.0 bits (580), Expect = 2.8e-56
Identity = 144/205 (70.24%), Postives = 161/205 (78.54%), Query Frame = 0


Query: 1   MEEIKAPQSAPLPPXXXXXXXXXXXXXXXXXXXXRPLDRNAYIQYTKMRAVIRDLRPHFL 60
           MEEIK   S P P  XXXXXXXXXXXXXXXXXXX PLDR+ ++QY+KMRAVI+DLRPHF+
Sbjct: 1   MEEIKPAPSVP-PQTXXXXXXXXXXXXXXXXXXXXPLDRSVFVQYSKMRAVIKDLRPHFV 60

Query: 61  EVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQD- 120
           EVLK  +FRNCKAANEIRERIKLLQDMY +MMA+T+E+LYIEKT+N+LDGQSLSVDNQD 
Sbjct: 61  EVLKAPDFRNCKAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILDGQSLSVDNQDN 120

Query: 121 QRSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQGANDGQTSGTYIVGGSAFGWNFIAFT 180
           +R RE HHD K                    EKQ  NDG +SG YIVGGSAFGWNFI F 
Sbjct: 121 RRPREPHHDVK-----LGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFM 180

Query: 181 GTEPVYYGVTKEEFRKKNPIVSSES 205
           G EPVYYGVTKE +R+KNPIVSSES
Sbjct: 181 GNEPVYYGVTKEAYREKNPIVSSES 199

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BLAST of Carg05597 vs. NCBI nr
Match: XP_008458259.1 (PREDICTED: uncharacterized protein LOC103497729 [Cucumis melo])

HSP 1 Score: 224.9 bits (572), Expect = 2.4e-55
Identity = 116/170 (68.24%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 35  RPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMAT 94
           RPLDRNAY+Q+TKMRAVIRDLRPHFLEV+KT +FRNCKAA EIRERIK+LQDMY  MM+ 
Sbjct: 28  RPLDRNAYVQFTKMRAVIRDLRPHFLEVMKTPDFRNCKAATEIRERIKVLQDMYASMMSA 87

Query: 95  TSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQG 154
           TSE+LYIEKT NVLDG           +REQHHDGK                    EKQ 
Sbjct: 88  TSETLYIEKTCNVLDG----------LAREQHHDGKLGDKSSTKSYESNNPSSYAPEKQR 147

Query: 155 ANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 205
           ANDG  SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPI SSES
Sbjct: 148 ANDGPISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES 187

[Close]

BLAST of Carg05597 vs. TAIR10
Match: AT1G01730.1 (unknown protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 77/175 (44.00%), Postives = 100/175 (57.14%), Query Frame = 0


Query: 35  RPLDRNAYIQ---YTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMM 94
           R L+ N  I+   Y KMR +++DLRPH LEVL+T + RN KA  EI+E++KL+  +Y  M
Sbjct: 67  RALEANLQIESSNYYKMRLLVKDLRPHVLEVLRTPDLRNSKAVIEIQEKMKLMLQLYEEM 126

Query: 95  MATTSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQXXXXXXXXXXXXXXXXXXXE 154
           +    ES   EKT+     +S S+ N              XXXXXXXXXXXXXXX     
Sbjct: 127 I---GESPKREKTA-----KSDSLSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK---- 186

Query: 155 KQGANDGQTSGTYIVGGSAFGWNFIAF--TGTEPVYYGVTKEEFRKKNPIVSSES 205
                        +VGGSAFGWNFI     GTEPVY G++KEE+R  +PI+  E+
Sbjct: 187 -------------VVGGSAFGWNFITSGGPGTEPVYSGMSKEEYRSSHPIMQVEA 216

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BLAST of Carg05597 vs. TrEMBL
Match: tr|A0A1S3C7F7|A0A1S3C7F7_CUCME (uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 116/170 (68.24%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 35  RPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMAT 94
           RPLDRNAY+Q+TKMRAVIRDLRPHFLEV+KT +FRNCKAA EIRERIK+LQDMY  MM+ 
Sbjct: 28  RPLDRNAYVQFTKMRAVIRDLRPHFLEVMKTPDFRNCKAATEIRERIKVLQDMYASMMSA 87

Query: 95  TSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQG 154
           TSE+LYIEKT NVLDG           +REQHHDGK                    EKQ 
Sbjct: 88  TSETLYIEKTCNVLDG----------LAREQHHDGKLGDKSSTKSYESNNPSSYAPEKQR 147

Query: 155 ANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 205
           ANDG  SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPI SSES
Sbjct: 148 ANDGPISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES 187

[Close]

BLAST of Carg05597 vs. TrEMBL
Match: tr|A0A0A0K7F0|A0A0A0K7F0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.4e-54
Identity = 117/171 (68.42%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 35  RPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMAT 94
           RP DRNAYIQ+TKMR VIRDLRPHFLEV+KT +FRNCKAA EIRERIK+LQD+Y MMMA 
Sbjct: 24  RPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAA 83

Query: 95  TSESLYIEKT-SNVLDGQSLSVDNQDQRSREQHHDGKQXXXXXXXXXXXXXXXXXXXEKQ 154
           TSE+LYIEKT SNVLDG           +REQHHDG                     EKQ
Sbjct: 84  TSETLYIEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQ 143

Query: 155 GANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 205
            ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPI SSES
Sbjct: 144 RANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES 184

[Close]

BLAST of Carg05597 vs. TrEMBL
Match: tr|F6I612|F6I612_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g02890 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.7e-31
Identity = 83/170 (48.82%), Postives = 104/170 (61.18%), Query Frame = 0


Query: 35  RPLDRNAYIQ---YTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMM 94
           R LD N  IQ   Y K RAV++DLRPHF+EVL++ +FRNCKAANEIRE++K+L D+Y  M
Sbjct: 39  RSLDSNVSIQNSKYFKTRAVVKDLRPHFIEVLRSPDFRNCKAANEIREQLKVLMDLYKQM 98

Query: 95  MATTSESLYIEKTSNVLDGQSLSVDNQD-QRSREQHHDGKQ------XXXXXXXXXXXXX 154
              T+E++ I K  NV + Q    +N+D Q+  E+H D KQ                   
Sbjct: 99  ---TAETVSIGKCKNVPEAQPTLSENKDGQKPHERHQDVKQAEQSVPDCAFAKPSEDMPF 158

Query: 155 XXXXXXEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFR 195
                 EKQ   DG   GTY+VGGSAFGWNFI F G++P YYGVTKE FR
Sbjct: 159 PTANLSEKQRPEDGWAQGTYVVGGSAFGWNFITFPGSKPAYYGVTKETFR 205

[Close]

BLAST of Carg05597 vs. TrEMBL
Match: tr|A0A2I4E638|A0A2I4E638_9ROSI (uncharacterized protein LOC108986624 OS=Juglans regia OX=51240 GN=LOC108986624 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.0e-30
Identity = 84/173 (48.55%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 35  RPLDRNAYIQ---YTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMM 94
           RPLD + +I+   Y +MRAVI++LRPHF+EVL+T +FRNCKAA EIRE++KLL+++Y   
Sbjct: 41  RPLDTSIHIKNPNYFQMRAVIKELRPHFVEVLRTPDFRNCKAAEEIREQMKLLKELY--- 100

Query: 95  MATTSESLYIEKTSNVLDGQSLSVDNQ-DQRSREQ------HHDGKQXXXXXXXXXXXXX 154
              T+E++   K+ NV +GQ LS +NQ DQ+ +EQ            XXX          
Sbjct: 101 KKITAETVSASKSKNVAEGQPLSGENQDDQKPQEQPXXXXXXXXXXXXXXAFVKPSENKF 160

Query: 155 XXXXXXEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKN 198
                 EK+GA D +  GTY+VGGSAFGWN+I + G +PVYYGVTKE FR  N
Sbjct: 161 FSSVASEKRGAEDVKIHGTYVVGGSAFGWNYITYLGDDPVYYGVTKESFRITN 210

[Close]

BLAST of Carg05597 vs. TrEMBL
Match: tr|C6SYV1|C6SYV1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100306306 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.4e-29
Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 38  DRNAYIQYTKMRAVIRDLRPHFLEVLKTTEFRNCKAANEIRERIKLLQDMYIMMMATTSE 97
           D NA+  Y K+RAVIRDLRPHFLEVL+T +++NCKA++EI+E++K++  +Y  M A   +
Sbjct: 26  DSNAHSNYFKIRAVIRDLRPHFLEVLRTPDYKNCKASHEIQEQLKIVVKLYENMKA---D 85

Query: 98  SLYIEKTSNVLDGQSLSVDNQDQRS--REQHHDGKQ---XXXXXXXXXXXXXXXXXXXEK 157
           +  + K+ NV DGQ  +  N DQ++   +Q   GKQ                      +K
Sbjct: 86  AASLAKSKNVQDGQMKAGQNMDQKTLKEQQPQHGKQSQVEKSFARPSEIKLTPPAPGFQK 145

Query: 158 QGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFR 195
           Q   + QT GTY+VGGSAFGWNFI F+G EPVYYG TKE+FR
Sbjct: 146 QLVEETQTQGTYVVGGSAFGWNFITFSGKEPVYYGRTKEQFR 184

The following BLAST results are available for this feature:

BLAST of Carg05597 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959506.1	9.7e-81	97.55	uncharacterized protein LOC111460466 [Cucurbita moschata]	[more]
XP_023548253.1	1.8e-79	98.04	uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo]	[more]
XP_023006667.1	1.0e-77	95.59	uncharacterized protein LOC111499323 [Cucurbita maxima]	[more]
XP_022156104.1	2.8e-56	70.24	uncharacterized protein LOC111023072 [Momordica charantia]	[more]
XP_008458259.1	2.4e-55	68.24	PREDICTED: uncharacterized protein LOC103497729 [Cucumis melo]	[more]

BLAST of Carg05597 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01730.1	1.7e-15	44.00	unknown protein	[more]

BLAST of Carg05597 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05597 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C7F7\|A0A1S3C7F7_CUCME	1.6e-55	68.24	uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=...	[more]
tr\|A0A0A0K7F0\|A0A0A0K7F0_CUCSA	1.4e-54	68.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1	[more]
tr\|F6I612\|F6I612_VITVI	4.7e-31	48.82	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g02890 PE=4 SV=...	[more]
tr\|A0A2I4E638\|A0A2I4E638_9ROSI	4.0e-30	48.55	uncharacterized protein LOC108986624 OS=Juglans regia OX=51240 GN=LOC108986624 P...	[more]
tr\|C6SYV1\|C6SYV1_SOYBN	4.4e-29	46.91	Uncharacterized protein OS=Glycine max OX=3847 GN=100306306 PE=2 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05597-RA	Carg05597-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..134
None	No IPR available	PANTHER	PTHR35459	FAMILY NOT NAMED	coord: 6..196
None	No IPR available	PANTHER	PTHR35459:SF2	SUBFAMILY NOT NAMED	coord: 6..196

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05597	Cla001220	Watermelon (97103) v1	carwmB0072
Carg05597	Csa6G003420	Cucumber (Chinese Long) v2	carcuB0073
Carg05597	MELO3C021217	Melon (DHL92) v3.5.1	carmeB0067
Carg05597	ClCG06G003800	Watermelon (Charleston Gray)	carwcgB0073
Carg05597	CSPI06G00420	Wild cucumber (PI 183967)	carcpiB0077
Carg05597	Cucsa.135460	Cucumber (Gy14) v1	carcgyB0077
Carg05597	CmaCh17G004260	Cucurbita maxima (Rimu)	carcmaB0091
Carg05597	CmoCh17G004050	Cucurbita moschata (Rifu)	carcmoB0097
Carg05597	Lsi09G015590	Bottle gourd (USVL1VR-Ls)	carlsiB061
Carg05597	Cp4.1LG12g03710	Cucurbita pepo (Zucchini)	carcpeB0099
Carg05597	CsGy6G000480	Cucumber (Gy14) v2	carcgybB0074
Carg05597	MELO3C021217.2	Melon (DHL92) v3.6.1	carmedB0068
Carg05597	CsaV3_6G000470	Cucumber (Chinese Long) v3	carcucB0081
Carg05597	Cla97C06G113220	Watermelon (97103) v2	carwmbB0070
Carg05597	Bhi12G001647	Wax gourd	carwgoB0081

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05597	Watermelon (97103) v1	carwmB0073
Carg05597	Silver-seed gourd	carcarB084
Carg05597	Cucurbita maxima (Rimu)	carcmaB0097
Carg05597	Cucurbita moschata (Rifu)	carcmoB0105
Carg05597	Cucurbita pepo (Zucchini)	carcpeB0103