Carg04305-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04305-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent RNA helicase
Location	Cucurbita_argyrosperma_scaffold_044 : 1306016 .. 1310497 (-)
Sequence length	1674

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGACGTAGCCGTACGATTAGCAAGCCTCGATCGAGTGAGAAGGGCACAGGGAACTCGGTGTCGATTGTTAATCGCCTTTACCGAACTCAGACAGGTTCTAAAACCCTTAAATTCCCGCTTCCGTCACCTTCTTTCCGGCGAGCTTCGGCGCCATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGGTCTCTCTAACTTCCTCCTTTTCCTCTTTACGCTTTCGAATGGGGGTTTTGAGTTTTTTTTTAATGGTTCTAGGTTTTGCGTCCTTGTTTAATTTCCACGATAATGTGGGACTTCTCGAATTGGGTAATGGGTTTTAGTTGCTTGGAGAATTACATCGTAGCTGATTGAATAGTATTCGGATTATGGCTTCAGTTGGACCTTTTTCAGCTTTTTGTAGTGGCGAAGGGTTTTCGTTGATTATACGAAGAGTTTAAAAGCTGTTTTTGGTTTCTAAAATATATTTGTTCTCTTCCCTTCTCATTGGAGCTGGAACGTAATTGCATAATTGTTTATATATCTTGTTTTCTCTCGTGGGGTTTTATTTTACTTTTTCTTAATTTTATAATCGAGGCTATCTATTTAAAACAATCATGGACTGGTGACTAGATAATGCGAGTAGTAGATTTTTGTAAAGAAGAAACTTGATTAATTTATTGAACTAGCTTTCAGAAGCTGTTGTGCCGAAGGAACACTTGGAAAAGTGGGTCCCATTTAGTGAGGTGGTGGAACTGTGTAAATACCTGCCAATTGTTTTTTTTTTTTGTTCCTTTGGCTTGATCTTGGGCTCCTTCACCTGTTTCCATTTTATTTTTTTATTCTTCTTTCGAAGATTAAACTCTCCAAATTTAATCAACTACTGATTTCTCATTACCAATCTTCTAAATTGGCCTGTTTGTAAGTTTCTTTTGATTGTAGATGTAGCTTAGTGTTTTTTTTTTTTGGAAATTGATGTATCTACATTGACTTCTTAGGATAAACCACCTGGGTGATTCTTTGTTTATTTTCTTAAATAACGGGGCTCTCTCTTTCAACCTGTTTTTTGGGGTGCTGCAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGTGGAAATGACAGATAGAGAGGTTGAGGAGTATCGAAAAAGGAGGGAAATCACTGTAGAAGGTCGTGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGGTACATTCCTTATATTTCATTTAATGGTCATCTTTCAAGTTTAAGCATCATTCTTGAGTGTACATTTTTTCATTATAATTTATGCATGCAAAGATTATGAACATATGAAGCGTGTCAGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCGGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTGTAAGAAAATAATATGCAAATTGTAAGTGTGCCTAATTGTGGTCGTTATGTTCAAATGGACTGATTTCTTTTTTTCATTTCATAATTTTTCTCAGCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTACGTGATCTTCAGAAAGGTAGATGGTGAAATAAATTCAAGATGCCCATACTAACCAAGTTTGAGGTGTCAATGAACACTTCCTTCTTACTACCATACCTAGTGTGATTATTTCTTGTTTTTTTGTTTCCTCTTTTCGTTGTTTATGATAGCAAGATGACTGACCCCTTCTTAAAATACTGACACCAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGAAAAATTGTTTCACAGGTTTAAGTTCTACTCTACATGTTATTACATTACTGTCATTACTGTGTGTCTTTGGTCTTTGCATAGGTTTAATAGATCTAAGATAAAAGTTCCAAAAAATAACAAGTAAAAAGGGTAACTTTCTGGTAGTTTGGGACCTCTGGTTTGTTCGAAAACCCCAGTTTTGGGATGTTTTGCAACTCACTTTTCTTCTAGACCTCTACTCTCTTAAATTTTTTTGGGTCTGAAAATTTTGCTGGAATTAGGTTTTGTATGATAATGCAGACTCTAAATGAATCGGTTGTTCAGAAAATTTGTTAAAACTGAGTTGTATTTTCTTGGCTTGTGGTGCAGTCCTGGTTGACAGCCAGCTTTTGAGCCAAGCATTTATGTGTGTTTTTGGTGGCTTTACTTGTGCTCATTTTTTAAGGGTTAGTTGGTGTTGACATTAAGTTGTGTTGTGCTTAAATCTTATAAGTTTCTCAAATGCTACTTTATTTTCAATACAGATTCGGCCTGATCGGCAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCAGGAAGTTTCTATACAATCCATACAAGGTAAAGACTCTTAACTCATACATCCATATGAGGGGACATAAATATGGTCTTCTGTTGCAACATTATCGTGAGATCTCAGATTGGTTGGAGGGGGAATGAAACATTCCTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTTAAAACCTTGTGGCGAAGCCCTTGAAGGGAAAGTTGAAAGAGAACAATATCTGCTAGCTGTGGGCTTGGATTGTTATCAATGGTATCAGAGTCAGACACCAGGCGATGTGCCAGCAAGAACGTTGGCCCCCTAAAGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTTCTTGTAAGGGTGTGGAAACCTCTCCCTCGTAAAGGAAGTTCAAAGAAGACAACATCGGGCGATTATTTTTACTGTTTTGAAAGAATTCACCGTGAAATAAAGTTTTTATCTTTCAGGACAACAGCTGAAGACGGTAATTGCAAAAAAATTTCTTCAAAATATAAATATATTACTATTCTTTCTCTTGTGGAGGGAGGGGGAAGCAGAAGGGTGGTCTTTAATATTCTTAATGTTGTAATCGACTTTTTTTGTTTATGTAATTTGCACAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAGTGAGTGGAGCTTGTGGGATCTTTTGTCGTTTACTTATTTTGTTGGGGACCCATTTCTCATAAGCCGGTCAGGGTATGATAAGAAGTAACTGGTACTGACTAGTTTTCCAGATTGGTGAAGTTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAACTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGACAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGGTATGTATTGTATATGAAAATTTTAAGGGCGAGGGCGACAGTTTACGGTACTCATGTGAGATCCCACGTCAGTTGAGGAGGAGAACGAAACATTCTTTATTAGAGTGTGGAAAACTCTCCCTAGCAGACGCCTTTTTAAAAACTTTGTGGCTGAAGCTTTTGATGAACCATTTTATTGCTCTCTCTAATATTTCCTAATAATGTCATTCCATTGCAGATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTTCATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCGAAAGAAGTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTTAGTTATTTCCATGCAAGTGAAATGGTGTTCTTGTTCCCATTACTGCCAAAATACTTTGAAGAATCAATACCAAGGATAAAAGGAATAGTAATCAAGAATGTTGTTGAGTATCAACATTTCATCTTAATCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGA

mRNA sequence

AGAAAGACGTAGCCGTACGATTAGCAAGCCTCGATCGAGTGAGAAGGGCACAGGGAACTCGGTGTCGATTGTTAATCGCCTTTACCGAACTCAGACAGGTTCTAAAACCCTTAAATTCCCGCTTCCGTCACCTTCTTTCCGGCGAGCTTCGGCGCCATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGTGGAAATGACAGATAGAGAGGTTGAGGAGTATCGAAAAAGGAGGGAAATCACTGTAGAAGGTCGTGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCGGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTACGTGATCTTCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGAAAAATTGTTTCACAGATTCGGCCTGATCGGCAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCAGGAAGTTTCTATACAATCCATACAAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAATTGGTGAAGTTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAACTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGACAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTTCATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCGAAAGAAGTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGA

Coding sequence (CDS)

ATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGTGGAAATGACAGATAGAGAGGTTGAGGAGTATCGAAAAAGGAGGGAAATCACTGTAGAAGGTCGTGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCGGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTACGTGATCTTCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGAAAAATTGTTTCACAGATTCGGCCTGATCGGCAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCAGGAAGTTTCTATACAATCCATACAAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAATTGGTGAAGTTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAACTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGACAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTTCATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCGAAAGAAGTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGA

Protein sequence

MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKEVIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGFGGGRSWS

Homology

[Close]

BLAST of Carg04305-RA vs. NCBI nr
Match: XP_022949583.1 (DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 960.3 bits (2481), Expect = 2.6e-276
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRGFGGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGFGGGRSWS 505

[Close]

BLAST of Carg04305-RA vs. NCBI nr
Match: XP_023525778.1 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 951.4 bits (2458), Expect = 1.2e-273
Identity = 497/505 (98.42%), Postives = 499/505 (98.81%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSV EMT+REVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIAILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRGFGGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGFGGGRSWS 505

[Close]

BLAST of Carg04305-RA vs. NCBI nr
Match: XP_022997755.1 (LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita maxima])

HSP 1 Score: 934.1 bits (2413), Expect = 2.0e-268
Identity = 491/505 (97.23%), Postives = 495/505 (98.02%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDY+ SEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYYGSEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSV EMT+REVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVAEMTEREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGS DLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKG DQ 
Sbjct: 301 NPYKVIIGSSDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGSDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALS HGD SQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSSHGDXSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXXX ARFAK +IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXXNARFAKGLIAILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRGFGGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGFGGGRSWS 505

[Close]

BLAST of Carg04305-RA vs. NCBI nr
Match: XP_008447604.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Cucumis melo])

HSP 1 Score: 928.3 bits (2398), Expect = 1.1e-266
Identity = 484/505 (95.84%), Postives = 493/505 (97.62%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGSTGY  SVRSSSSK+DY+ SEA KKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSTGYSGSVRSSSSKNDYYGSEASKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SV  MT+REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+I ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIGILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Carg04305-RA vs. NCBI nr
Match: XP_022980599.1 (DEAD-box ATP-dependent RNA helicase 20 [Cucurbita maxima])

HSP 1 Score: 925.6 bits (2391), Expect = 7.1e-266
Identity = 483/502 (96.22%), Postives = 494/502 (98.41%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSGFGGSTGY +SV+SSSSKSD++ASEAP+KVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGFGGSTGYSSSVQSSSSKSDHYASEAPRKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SV  MT+REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYVMQEI+KAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIAILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGR 503
           APPPPSGHGGFRDRGRG+GGGR
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGR 502

[Close]

BLAST of Carg04305-RA vs. TAIR10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 819.3 bits (2115), Expect = 1.3e-237
Identity = 428/505 (84.75%), Postives = 462/505 (91.49%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRT D TSYRDRRSDSGFGG++ YG+S   +SSK D   +E+P+K+DLDGL  FE
Sbjct: 1   MSRYDSRTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ +V  MTD EVEEYRK REITVEG+D+PKPVKSFRDVGFPDYV++E+ KAGFT
Sbjct: 61  KNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVHVNAQP+L+ GDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEA+KFG+SSKIK TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES+
Sbjct: 181 TRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESN 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           +TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS IRPDRQTLYWSATWPKEVEQL++KFLY
Sbjct: 241 NTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGS DLKAN AIRQ VD++SE+QKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQ 
Sbjct: 301 NPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXX   ARFAKE+  IL+EAGQKVSPELA+MGR 
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXVANARFAKELTNILQEAGQKVSPELASMGRS 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
             PPP G GGFRDR    G  R WS
Sbjct: 481 TAPPPPGLGGFRDR----GSRRGWS 501

[Close]

BLAST of Carg04305-RA vs. TAIR10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 619.8 bits (1597), Expect = 1.5e-177
Identity = 298/432 (68.98%), Postives = 360/432 (83.33%), Query Frame = 0


Query: 50  KVDLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDY 109
           K +   L HFEKNFY+E+ +V  MT+++V  YR  R+I+VEGRDVPKP+K F+D  FPD 
Sbjct: 116 KQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDN 175

Query: 110 VMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSP 169
           +++ IAK GFTEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L  
Sbjct: 176 ILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ 235

Query: 170 GDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIAT 229
            DGPIVL+LAPTRELAVQIQ+E+ KFG  S +++TCIYGG PKGPQ+RDL++GVEIVIAT
Sbjct: 236 DDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIAT 295

Query: 230 PGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
           PGRLIDM+E  HTNL+RVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+
Sbjct: 296 PGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPR 355

Query: 290 EVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILI 349
           EVE LAR+FL +PYK IIGS DLKAN +I Q ++IV   +KYN+L+ LL+ +MDGS+ILI
Sbjct: 356 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 415

Query: 350 FMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 409
           F++TK+GCDQ TRQLRMDGWPAL+IHGDK+Q+ERD VL+EF+SG+SPIMTATDVAARGLD
Sbjct: 416 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 475

Query: 410 VKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQK 469
           VKD+K V+NYDFP +LEDY+HRI                    A+FA+E++ IL+EAGQ 
Sbjct: 476 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQV 535

Query: 470 VSPELAAMGRGA 482
           V P L+A+ R +
Sbjct: 536 VPPTLSALVRSS 547

[Close]

BLAST of Carg04305-RA vs. TAIR10
Match: AT3G01540.2 (DEAD box RNA helicase 1)

HSP 1 Score: 424.5 bits (1090), Expect = 9.3e-119
Identity = 223/430 (51.86%), Postives = 296/430 (68.84%), Query Frame = 0


Query: 79  EEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRD 138
           E Y +R EITV G  VP P+ SF   GFP  +++E+  AGF+ PTPIQ+Q WP+A++GRD
Sbjct: 138 EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRD 197

Query: 139 LIGIAETGSGKTLAYLLPAIVHVNAQPILSPGD-GPIVLVLAPTRELAVQIQQEATKFGA 198
           ++ IA+TGSGKTL YL+P  +H+  Q I +    GP +LVL+PTRELA QIQ+EA KFG 
Sbjct: 198 IVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGR 257

Query: 199 SSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADR 258
           SS+I  TC+YGG PKGPQ+RDL++G +IV+ATPGRL D++E    +LR+++YLVLDEADR
Sbjct: 258 SSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADR 317

Query: 259 MLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPD-LKANH 318
           MLDMGF+PQIRKIV +I   RQTL ++ATWPK V ++A   L NP +V IG+ D L AN 
Sbjct: 318 MLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 377

Query: 319 AIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHG 378
           +I QH+++V+  +K  +L ++L     GS+++IF  TK+ CDQ TR L    + A +IHG
Sbjct: 378 SITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHG 437

Query: 379 DKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXX 438
           DKSQ ERD VL++FRSG++P++ ATDVAARGLDVKD++ V+NYDFP  +EDYVHRI    
Sbjct: 438 DKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTG 497

Query: 439 XXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSP---ELAAMGRGAP------PPPSG 498
                           ++ A ++I ILE A Q+V P   E+A  G G         PPSG
Sbjct: 498 RAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGGGMNKFSRWGPPSG 557

[Close]

BLAST of Carg04305-RA vs. TAIR10
Match: AT3G06480.1 (DEAD box RNA helicase family protein)

HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-112
Identity = 215/433 (49.65%), Postives = 292/433 (67.44%), Query Frame = 0


Query: 78  VEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGR 137
           VE YRK+ E+T  G ++P P  +F   G P  +++E+  AGF  PTPIQ+Q WP+AL+ R
Sbjct: 414 VEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSR 473

Query: 138 DLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGA 197
           D++ IA+TGSGKTL YL+PA + +         +GP VL+LAPTRELA QIQ EA +FG 
Sbjct: 474 DIVAIAKTGSGKTLGYLIPAFILLR-HCRNDSRNGPTVLILAPTRELATQIQDEALRFGR 533

Query: 198 SSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADR 257
           SS+I  TC+YGG PKGPQ+++L++G +IV+ATPGRL D++E    + ++V+ LVLDEADR
Sbjct: 534 SSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADR 593

Query: 258 MLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPD-LKANH 317
           MLDMGF+PQIRKIV++I P RQTL ++ATWPKEV ++A   L NP +V IG  D L AN 
Sbjct: 594 MLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANK 653

Query: 318 AIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHG 377
           AI Q+V++V + +K  +L ++L     GS+++IF  TK+ CD   R +    + A+ IHG
Sbjct: 654 AITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHG 713

Query: 378 DKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXX 437
           DK+Q ERDWVL++FRSGKS ++ ATDVAARGLD+KD++ VINYDFP  +EDYVHRI    
Sbjct: 714 DKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTG 773

Query: 438 XXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSP---ELAAMGRGAPPP--PSGHGGF 497
           XXX              ++A ++I +LE A Q+V P   ++A  G G   P       G 
Sbjct: 774 XXXATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMRGGGXXGPGYSQDRRGM 833

Query: 498 RDRGRGFGGGRSW 505
            +R    GGG  W
Sbjct: 834 VNRFDSGGGGTRW 844

[Close]

BLAST of Carg04305-RA vs. TAIR10
Match: AT5G14610.1 (DEAD box RNA helicase family protein)

HSP 1 Score: 380.2 bits (975), Expect = 2.0e-105
Identity = 203/405 (50.12%), Postives = 278/405 (68.64%), Query Frame = 0


Query: 105 GFPDYVM-----QEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 164
           GF  Y++     + +  AGF+ P+PIQ+Q WP+A++ RD++ IA+TGSGKTL YL+P  +
Sbjct: 230 GFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 289

Query: 165 HVNAQPILSPGD-GPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRD 224
           H+  Q I +    GP +LVL+PTRELA QIQ EA KFG SSKI   C+YGG PKGPQ+++
Sbjct: 290 HL--QRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKE 349

Query: 225 LQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 284
           +++GV+IV+ATPGRL D++E    +L +V+YLVLDEADRMLDMGF+PQIRKIV+++   R
Sbjct: 350 IERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKR 409

Query: 285 QTLYWSATWPKEVEQLARKFLYNPYKVIIGSPD-LKANHAIRQHVDIVSENQKYNKLVKL 344
           QTL ++ATWPKEV ++A   L NP +V IG+ D L AN +I Q +++++  +K+++L ++
Sbjct: 410 QTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQI 469

Query: 345 LEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPI 404
           L     GS+I+IF  TK+ CDQ  R L    + A +IHGDKSQAERD VL++FRSG++P+
Sbjct: 470 LRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPV 529

Query: 405 MTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAK 464
           + ATDVAARGLDVKD++ V+NYDFP  +EDYVHRI                    A+ A 
Sbjct: 530 LVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHAS 589

Query: 465 EVIAILEEAGQKVSPELAAMG-RGAPPPPSGHGGFRDRGRGFGGG 502
           ++I ILE A QKV P++  M  RG      G   FR  G    GG
Sbjct: 590 DLIKILEGANQKVPPQVREMATRGG----GGMNKFRRWGTPSSGG 627

[Close]

BLAST of Carg04305-RA vs. Swiss-Prot
Match: sp|Q9C718|RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 2.3e-236
Identity = 428/505 (84.75%), Postives = 462/505 (91.49%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRT D TSYRDRRSDSGFGG++ YG+S   +SSK D   +E+P+K+DLDGL  FE
Sbjct: 1   MSRYDSRTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ +V  MTD EVEEYRK REITVEG+D+PKPVKSFRDVGFPDYV++E+ KAGFT
Sbjct: 61  KNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVHVNAQP+L+ GDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEA+KFG+SSKIK TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES+
Sbjct: 181 TRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESN 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           +TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS IRPDRQTLYWSATWPKEVEQL++KFLY
Sbjct: 241 NTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGS DLKAN AIRQ VD++SE+QKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQ 
Sbjct: 301 NPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXX   ARFAKE+  IL+EAGQKVSPELA+MGR 
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXVANARFAKELTNILQEAGQKVSPELASMGRS 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
             PPP G GGFRDR    G  R WS
Sbjct: 481 TAPPPPGLGGFRDR----GSRRGWS 501

[Close]

BLAST of Carg04305-RA vs. Swiss-Prot
Match: sp|Q5QMN3|RH20_ORYSJ (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0197200 PE=3 SV=2)

HSP 1 Score: 810.4 bits (2092), Expect = 1.1e-233
Identity = 433/505 (85.74%), Postives = 463/505 (91.68%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSR+D R +DP SYRDRRS+  FGG    G    + +SK+D  A+ A    DLDGLP FE
Sbjct: 1   MSRFDGRAADPGSYRDRRSEGAFGG----GTRAFAPTSKADSAAAAA----DLDGLPRFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ SV  MT+ EVE YR+RREITVEGRDVPKPV+ FRDVGFP+YV+QEI KAGF 
Sbjct: 61  KNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMAL+GRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGF+PQI+KIVSQIRPDRQTLYWSATWPKEVEQLAR FL+
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLF 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           +PYKVIIGS +LKANHAI QHV+I+SE+QKYNKLV LLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 DPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF+SGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAK++I ILEEAGQKVSPELA MGRG
Sbjct: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKDLINILEEAGQKVSPELANMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPP SGH   RDR RG+GGGRSWS
Sbjct: 481 APPPSSGH---RDRYRGYGGGRSWS 494

[Close]

BLAST of Carg04305-RA vs. Swiss-Prot
Match: sp|Q5N7W4|RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0911100 PE=2 SV=2)

HSP 1 Score: 641.3 bits (1653), Expect = 8.7e-183
Identity = 334/456 (73.25%), Postives = 391/456 (85.75%), Query Frame = 0


Query: 50  KVDLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDY 109
           K D   L  FEKNFY+E  +V  M+D +V +YR++R+ITVEG DVPKPV+ F++  FPDY
Sbjct: 202 KPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDY 261

Query: 110 VMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSP 169
            MQ IAK+GF EPTPIQSQGWPMALKGRD+IGIA+TGSGKTL+YLLP +VHV AQP L  
Sbjct: 262 CMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 321

Query: 170 GDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIAT 229
           GDGPIVL+LAPTRELAVQIQQE+ KFG+ S+ ++TCIYGG PKGPQ+RDL++GVEIVIAT
Sbjct: 322 GDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 381

Query: 230 PGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
           PGRLIDM+E  HTNLRRVTYLVLDEADRMLDMGF+PQIRKIV+QIRPDRQTLYWSATWP+
Sbjct: 382 PGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPR 441

Query: 290 EVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILI 349
           EVE LAR+FL NPYKVIIGSPDLKANH+I+Q ++++SE++KY +L KLL D+MDGSRILI
Sbjct: 442 EVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILI 501

Query: 350 FMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 409
           F  TKK CD+ TRQLRMDGWPALSIHGDK+QAERD+VL+EF+SGKSPIM ATDVAARGLD
Sbjct: 502 FFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLD 561

Query: 410 VKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQK 469
           VKD+K VIN+DFP +LEDY+HR XXXXXXXXXXXXXXXXXXX A+F++ ++ IL EAGQ 
Sbjct: 562 VKDIKCVINFDFPTTLEDYIHRXXXXXXXXXXXXXXXXXXXXNAKFSRNLVKILREAGQV 621

Query: 470 VSPELAAMGRGAPPPPSGHGGFRDRGRGFGGGRSWS 506
           V+P L +M + A     G G FR RGRG  G RS S
Sbjct: 622 VNPALESMAKSA--SSMGGGNFRSRGRGGFGNRSGS 655

[Close]

BLAST of Carg04305-RA vs. Swiss-Prot
Match: sp|Q8W4R3|RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2)

HSP 1 Score: 619.8 bits (1597), Expect = 2.7e-176
Identity = 298/432 (68.98%), Postives = 360/432 (83.33%), Query Frame = 0


Query: 50  KVDLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDY 109
           K +   L HFEKNFY+E+ +V  MT+++V  YR  R+I+VEGRDVPKP+K F+D  FPD 
Sbjct: 116 KQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDN 175

Query: 110 VMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSP 169
           +++ IAK GFTEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L  
Sbjct: 176 ILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ 235

Query: 170 GDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIAT 229
            DGPIVL+LAPTRELAVQIQ+E+ KFG  S +++TCIYGG PKGPQ+RDL++GVEIVIAT
Sbjct: 236 DDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIAT 295

Query: 230 PGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
           PGRLIDM+E  HTNL+RVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+
Sbjct: 296 PGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPR 355

Query: 290 EVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILI 349
           EVE LAR+FL +PYK IIGS DLKAN +I Q ++IV   +KYN+L+ LL+ +MDGS+ILI
Sbjct: 356 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 415

Query: 350 FMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 409
           F++TK+GCDQ TRQLRMDGWPAL+IHGDK+Q+ERD VL+EF+SG+SPIMTATDVAARGLD
Sbjct: 416 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 475

Query: 410 VKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQK 469
           VKD+K V+NYDFP +LEDY+HRI                    A+FA+E++ IL+EAGQ 
Sbjct: 476 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQV 535

Query: 470 VSPELAAMGRGA 482
           V P L+A+ R +
Sbjct: 536 VPPTLSALVRSS 547

[Close]

BLAST of Carg04305-RA vs. Swiss-Prot
Match: sp|Q5B0J9|DBP2_EMENI (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 1.6e-160
Identity = 285/441 (64.63%), Postives = 349/441 (79.14%), Query Frame = 0


Query: 52  DLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVM 111
           DLD LP FEK+FY E   V   + REV+E+RK+ E+TV+GRDVP+PV++F + GFP YV+
Sbjct: 93  DLDTLPKFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVL 152

Query: 112 QEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGD 171
            E+   GF +PT IQSQGWPMAL GRD++GIAETGSGKTL+Y LPAIVH+NAQP+L+PGD
Sbjct: 153 SEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGD 212

Query: 172 GPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
           GPIVL+LAPTRELAVQIQ E +KFG SS+I+NTC+YGGVPKGPQ+RDL +GVE+ IATPG
Sbjct: 213 GPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPG 272

Query: 232 RLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEV 291
           RLIDM+E+  TNLRRVTYLVLDEADRMLDMGF+PQIRKI+SQIRPDRQT  WSATWPKEV
Sbjct: 273 RLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEV 332

Query: 292 EQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMD--GSRILI 351
            QLA  FL N  +V IGS DL ANH I Q V+++SE +K ++++K LE IM+  G++ L+
Sbjct: 333 RQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLV 392

Query: 352 FMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 411
           F  TK+  D+ TR LR DGWPALSIHGDK Q ERDWVL+EF++GKSPIM ATDVA+RG+D
Sbjct: 393 FTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGID 452

Query: 412 VKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQK 471
           V+D+ +VINYD+P + EDYVHRI   XXXXXX           A+ A++++ IL EA Q+
Sbjct: 453 VRDITHVINYDYPNNSEDYVHRIGRTXXXXXXGTAITFFTTDNAKQARDLVTILSEAKQQ 512

Query: 472 VSPELAAMGRGAPPPPSGHGG 491
           + P LA M R      SG GG
Sbjct: 513 IDPRLAEMVR-----YSGGGG 528

[Close]

BLAST of Carg04305-RA vs. TrEMBL
Match: tr|A0A1S3BHT9|A0A1S3BHT9_CUCME (DEAD-box ATP-dependent RNA helicase 20 OS=Cucumis melo OX=3656 GN=LOC103490017 PE=3 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 7.2e-267
Identity = 484/505 (95.84%), Postives = 493/505 (97.62%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGSTGY  SVRSSSSK+DY+ SEA KKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSTGYSGSVRSSSSKNDYYGSEASKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SV  MT+REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+I ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIGILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Carg04305-RA vs. TrEMBL
Match: tr|A0A0A0LFT6|A0A0A0LFT6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848820 PE=3 SV=1)

HSP 1 Score: 920.2 bits (2377), Expect = 2.0e-264
Identity = 480/505 (95.05%), Postives = 490/505 (97.03%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGS      VRSSSSKSDY+ SEAPKK+DLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSXXXXXXVRSSSSKSDYYGSEAPKKLDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SV  MT+REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTC+YGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+I ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIGILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Carg04305-RA vs. TrEMBL
Match: tr|A0A2C9UXY0|A0A2C9UXY0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G027000 PE=3 SV=1)

HSP 1 Score: 881.3 bits (2276), Expect = 1.0e-252
Identity = 456/505 (90.30%), Postives = 481/505 (95.25%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+ DPTSYRDRRSDSGFGG++GY  S RSSS + DY  +++P+K DLDGL  FE
Sbjct: 1   MSRYDSRSGDPTSYRDRRSDSGFGGASGYAGSGRSSSERRDYGRADSPRKSDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ SV  M++REVEEYR+RREITVEGRDVPKPVK FRDVGFPDYV+QEI KAGF 
Sbjct: 61  KNFYVESPSVEAMSEREVEEYRQRREITVEGRDVPKPVKHFRDVGFPDYVLQEITKAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAP
Sbjct: 121 EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEA KFGASS+IKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGS DLKANHAIRQHVDIV+ENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSADLKANHAIRQHVDIVTENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+I ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELITILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Carg04305-RA vs. TrEMBL
Match: tr|B9SN43|B9SN43_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis OX=3988 GN=RCOM_0312580 PE=3 SV=1)

HSP 1 Score: 878.2 bits (2268), Expect = 8.6e-252
Identity = 455/505 (90.10%), Postives = 484/505 (95.84%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+ DPTSYRDRRSDSGFGG+  YG S RSSS + +Y  + +P+K DLDGL  FE
Sbjct: 1   MSRYDSRSGDPTSYRDRRSDSGFGGALAYGGSGRSSSERREYDRAISPRKSDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ SV  M++REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYV++E+ +AGF 
Sbjct: 61  KNFYVESPSVAAMSEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVLEEVTRAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAP
Sbjct: 121 EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASS+IKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKV+IGS DLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVVIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVK+VINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXX ARFAKE+I+ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXNARFAKELISILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSG+GGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGYGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Carg04305-RA vs. TrEMBL
Match: tr|A0A2P6RY10|A0A2P6RY10_ROSCH (Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0142931 PE=3 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 1.1e-251
Identity = 455/505 (90.10%), Postives = 485/505 (96.04%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+ DPTSYRDRRSDSGFGG+TGYG S RSSSS+ DY  +E+P+K+DLDGL  FE
Sbjct: 1   MSRYDSRSGDPTSYRDRRSDSGFGGATGYGGSARSSSSRKDYEGAESPRKLDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+  V  MT+REVEEYRKRREITVEGRDVPKP+KSF D+GFP+YVMQEI KAGF 
Sbjct: 61  KNFYVESPEVEGMTEREVEEYRKRREITVEGRDVPKPIKSFCDIGFPEYVMQEITKAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQE+TKFGASSKIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           +TNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 NTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           N YKVIIGSPDLKANH+IRQ VDI++ENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NAYKVIIGSPDLKANHSIRQIVDIITENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXX RFAKE+I++LEEAGQKVSP+LAAMGRG
Sbjct: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXXRFAKELISLLEEAGQKVSPDLAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGR WS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRPWS 505

The following BLAST results are available for this feature:

BLAST of Carg04305-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949583.1	2.6e-276	100.00	DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Cucurbita moschata]	[more]
XP_023525778.1	1.2e-273	98.42	DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022997755.1	2.0e-268	97.23	LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita maxi...	[more]
XP_008447604.1	1.1e-266	95.84	PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Cucumis melo]	[more]
XP_022980599.1	7.1e-266	96.22	DEAD-box ATP-dependent RNA helicase 20 [Cucurbita maxima]	[more]

BLAST of Carg04305-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55150.1	1.3e-237	84.75	DEA(D/H)-box RNA helicase family protein	[more]
AT5G63120.2	1.5e-177	68.98	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G01540.2	9.3e-119	51.86	DEAD box RNA helicase 1	[more]
AT3G06480.1	2.2e-112	49.65	DEAD box RNA helicase family protein	[more]
AT5G14610.1	2.0e-105	50.12	DEAD box RNA helicase family protein	[more]

BLAST of Carg04305-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C718\|RH20_ARATH	2.3e-236	84.75	DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 P...	[more]
sp\|Q5QMN3\|RH20_ORYSJ	1.1e-233	85.74	DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q5N7W4\|RH30_ORYSJ	8.7e-183	73.25	DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q8W4R3\|RH30_ARATH	2.7e-176	68.98	DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 P...	[more]
sp\|Q5B0J9\|DBP2_EMENI	1.6e-160	64.63	ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38...	[more]

BLAST of Carg04305-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BHT9\|A0A1S3BHT9_CUCME	7.2e-267	95.84	DEAD-box ATP-dependent RNA helicase 20 OS=Cucumis melo OX=3656 GN=LOC103490017 P...	[more]
tr\|A0A0A0LFT6\|A0A0A0LFT6_CUCSA	2.0e-264	95.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848820 PE=3 SV=1	[more]
tr\|A0A2C9UXY0\|A0A2C9UXY0_MANES	1.0e-252	90.30	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G027000 PE=3 SV=...	[more]
tr\|B9SN43\|B9SN43_RICCO	8.6e-252	90.10	Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis OX=3988 GN=RCO...	[more]
tr\|A0A2P6RY10\|A0A2P6RY10_ROSCH	1.1e-251	90.10	Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0142931 PE=3 S...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014014	RNA_helicase_DEAD_Q_motif
IPR000629	RNA-helicase_DEAD-box_CS
IPR011545	DEAD/DEAH_box_helicase_dom
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg04305	Carg04305	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg04305-RA	Carg04305-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04305-RA.CDS.10	Carg04305-RA.CDS.10	CDS
Carg04305-RA.CDS.9	Carg04305-RA.CDS.9	CDS
Carg04305-RA.CDS.8	Carg04305-RA.CDS.8	CDS
Carg04305-RA.CDS.7	Carg04305-RA.CDS.7	CDS
Carg04305-RA.CDS.6	Carg04305-RA.CDS.6	CDS
Carg04305-RA.CDS.5	Carg04305-RA.CDS.5	CDS
Carg04305-RA.CDS.4	Carg04305-RA.CDS.4	CDS
Carg04305-RA.CDS.3	Carg04305-RA.CDS.3	CDS
Carg04305-RA.CDS.2	Carg04305-RA.CDS.2	CDS
Carg04305-RA.CDS.1	Carg04305-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04305-RA.five_prime_UTR.1	Carg04305-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04305-RA.exon.10	Carg04305-RA.exon.10	exon
Carg04305-RA.exon.9	Carg04305-RA.exon.9	exon
Carg04305-RA.exon.8	Carg04305-RA.exon.8	exon
Carg04305-RA.exon.7	Carg04305-RA.exon.7	exon
Carg04305-RA.exon.6	Carg04305-RA.exon.6	exon
Carg04305-RA.exon.5	Carg04305-RA.exon.5	exon
Carg04305-RA.exon.4	Carg04305-RA.exon.4	exon
Carg04305-RA.exon.3	Carg04305-RA.exon.3	exon
Carg04305-RA.exon.2	Carg04305-RA.exon.2	exon
Carg04305-RA.exon.1	Carg04305-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 118..321 e-value: 2.9E-68 score: 242.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 130..305 score: 33.075
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 358..439 e-value: 1.7E-33 score: 127.3
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 330..439 e-value: 6.2E-30 score: 103.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 333..478 score: 23.844
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 318..447 e-value: 2.3587E-42 score: 147.384
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 305..479 e-value: 6.7E-60 score: 203.4
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 62..304 e-value: 1.2E-89 score: 301.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 478..505
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 24..501
None	No IPR available	PANTHER	PTHR24031:SF269	DEAD-BOX ATP-DEPENDENT RNA HELICASE 30	coord: 24..501
None	No IPR available	CDD	cd00268	DEADc	coord: 101..305 e-value: 4.39433E-105 score: 314.423
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 123..294 e-value: 1.1E-49 score: 168.5
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 251..259
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 99..127 score: 11.888
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 171..453