Carg04305 (gene) Silver-seed gourd

Overview
NameCarg04305
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionATP-dependent RNA helicase
LocationCucurbita_argyrosperma_scaffold_044 : 1306016 .. 1310497 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAGACGTAGCCGTACGATTAGCAAGCCTCGATCGAGTGAGAAGGGCACAGGGAACTCGGTGTCGATTGTTAATCGCCTTTACCGAACTCAGACAGGTTCTAAAACCCTTAAATTCCCGCTTCCGTCACCTTCTTTCCGGCGAGCTTCGGCGCCATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGGTCTCTCTAACTTCCTCCTTTTCCTCTTTACGCTTTCGAATGGGGGTTTTGAGTTTTTTTTTAATGGTTCTAGGTTTTGCGTCCTTGTTTAATTTCCACGATAATGTGGGACTTCTCGAATTGGGTAATGGGTTTTAGTTGCTTGGAGAATTACATCGTAGCTGATTGAATAGTATTCGGATTATGGCTTCAGTTGGACCTTTTTCAGCTTTTTGTAGTGGCGAAGGGTTTTCGTTGATTATACGAAGAGTTTAAAAGCTGTTTTTGGTTTCTAAAATATATTTGTTCTCTTCCCTTCTCATTGGAGCTGGAACGTAATTGCATAATTGTTTATATATCTTGTTTTCTCTCGTGGGGTTTTATTTTACTTTTTCTTAATTTTATAATCGAGGCTATCTATTTAAAACAATCATGGACTGGTGACTAGATAATGCGAGTAGTAGATTTTTGTAAAGAAGAAACTTGATTAATTTATTGAACTAGCTTTCAGAAGCTGTTGTGCCGAAGGAACACTTGGAAAAGTGGGTCCCATTTAGTGAGGTGGTGGAACTGTGTAAATACCTGCCAATTGTTTTTTTTTTTTGTTCCTTTGGCTTGATCTTGGGCTCCTTCACCTGTTTCCATTTTATTTTTTTATTCTTCTTTCGAAGATTAAACTCTCCAAATTTAATCAACTACTGATTTCTCATTACCAATCTTCTAAATTGGCCTGTTTGTAAGTTTCTTTTGATTGTAGATGTAGCTTAGTGTTTTTTTTTTTTGGAAATTGATGTATCTACATTGACTTCTTAGGATAAACCACCTGGGTGATTCTTTGTTTATTTTCTTAAATAACGGGGCTCTCTCTTTCAACCTGTTTTTTGGGGTGCTGCAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGTGGAAATGACAGATAGAGAGGTTGAGGAGTATCGAAAAAGGAGGGAAATCACTGTAGAAGGTCGTGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGGTACATTCCTTATATTTCATTTAATGGTCATCTTTCAAGTTTAAGCATCATTCTTGAGTGTACATTTTTTCATTATAATTTATGCATGCAAAGATTATGAACATATGAAGCGTGTCAGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCGGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTGTAAGAAAATAATATGCAAATTGTAAGTGTGCCTAATTGTGGTCGTTATGTTCAAATGGACTGATTTCTTTTTTTCATTTCATAATTTTTCTCAGCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTACGTGATCTTCAGAAAGGTAGATGGTGAAATAAATTCAAGATGCCCATACTAACCAAGTTTGAGGTGTCAATGAACACTTCCTTCTTACTACCATACCTAGTGTGATTATTTCTTGTTTTTTTGTTTCCTCTTTTCGTTGTTTATGATAGCAAGATGACTGACCCCTTCTTAAAATACTGACACCAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGAAAAATTGTTTCACAGGTTTAAGTTCTACTCTACATGTTATTACATTACTGTCATTACTGTGTGTCTTTGGTCTTTGCATAGGTTTAATAGATCTAAGATAAAAGTTCCAAAAAATAACAAGTAAAAAGGGTAACTTTCTGGTAGTTTGGGACCTCTGGTTTGTTCGAAAACCCCAGTTTTGGGATGTTTTGCAACTCACTTTTCTTCTAGACCTCTACTCTCTTAAATTTTTTTGGGTCTGAAAATTTTGCTGGAATTAGGTTTTGTATGATAATGCAGACTCTAAATGAATCGGTTGTTCAGAAAATTTGTTAAAACTGAGTTGTATTTTCTTGGCTTGTGGTGCAGTCCTGGTTGACAGCCAGCTTTTGAGCCAAGCATTTATGTGTGTTTTTGGTGGCTTTACTTGTGCTCATTTTTTAAGGGTTAGTTGGTGTTGACATTAAGTTGTGTTGTGCTTAAATCTTATAAGTTTCTCAAATGCTACTTTATTTTCAATACAGATTCGGCCTGATCGGCAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCAGGAAGTTTCTATACAATCCATACAAGGTAAAGACTCTTAACTCATACATCCATATGAGGGGACATAAATATGGTCTTCTGTTGCAACATTATCGTGAGATCTCAGATTGGTTGGAGGGGGAATGAAACATTCCTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTTAAAACCTTGTGGCGAAGCCCTTGAAGGGAAAGTTGAAAGAGAACAATATCTGCTAGCTGTGGGCTTGGATTGTTATCAATGGTATCAGAGTCAGACACCAGGCGATGTGCCAGCAAGAACGTTGGCCCCCTAAAGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTTCTTGTAAGGGTGTGGAAACCTCTCCCTCGTAAAGGAAGTTCAAAGAAGACAACATCGGGCGATTATTTTTACTGTTTTGAAAGAATTCACCGTGAAATAAAGTTTTTATCTTTCAGGACAACAGCTGAAGACGGTAATTGCAAAAAAATTTCTTCAAAATATAAATATATTACTATTCTTTCTCTTGTGGAGGGAGGGGGAAGCAGAAGGGTGGTCTTTAATATTCTTAATGTTGTAATCGACTTTTTTTGTTTATGTAATTTGCACAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAGTGAGTGGAGCTTGTGGGATCTTTTGTCGTTTACTTATTTTGTTGGGGACCCATTTCTCATAAGCCGGTCAGGGTATGATAAGAAGTAACTGGTACTGACTAGTTTTCCAGATTGGTGAAGTTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAACTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGACAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGGTATGTATTGTATATGAAAATTTTAAGGGCGAGGGCGACAGTTTACGGTACTCATGTGAGATCCCACGTCAGTTGAGGAGGAGAACGAAACATTCTTTATTAGAGTGTGGAAAACTCTCCCTAGCAGACGCCTTTTTAAAAACTTTGTGGCTGAAGCTTTTGATGAACCATTTTATTGCTCTCTCTAATATTTCCTAATAATGTCATTCCATTGCAGATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTTCATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCGAAAGAAGTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTTAGTTATTTCCATGCAAGTGAAATGGTGTTCTTGTTCCCATTACTGCCAAAATACTTTGAAGAATCAATACCAAGGATAAAAGGAATAGTAATCAAGAATGTTGTTGAGTATCAACATTTCATCTTAATCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGA

mRNA sequence

AGAAAGACGTAGCCGTACGATTAGCAAGCCTCGATCGAGTGAGAAGGGCACAGGGAACTCGGTGTCGATTGTTAATCGCCTTTACCGAACTCAGACAGGTTCTAAAACCCTTAAATTCCCGCTTCCGTCACCTTCTTTCCGGCGAGCTTCGGCGCCATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGTGGAAATGACAGATAGAGAGGTTGAGGAGTATCGAAAAAGGAGGGAAATCACTGTAGAAGGTCGTGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCGGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTACGTGATCTTCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGAAAAATTGTTTCACAGATTCGGCCTGATCGGCAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCAGGAAGTTTCTATACAATCCATACAAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAATTGGTGAAGTTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAACTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGACAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTTCATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCGAAAGAAGTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGA

Coding sequence (CDS)

ATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGTGGAAATGACAGATAGAGAGGTTGAGGAGTATCGAAAAAGGAGGGAAATCACTGTAGAAGGTCGTGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCGGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTACGTGATCTTCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGAAAAATTGTTTCACAGATTCGGCCTGATCGGCAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCAGGAAGTTTCTATACAATCCATACAAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAATTGGTGAAGTTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAACTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGACAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTTCATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCGAAAGAAGTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGA

Protein sequence

MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKEVIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGFGGGRSWS
Homology
[Close]
BLAST of Carg04305 vs. NCBI nr
Match: XP_022949583.1 (DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 960.3 bits (2481), Expect = 2.6e-276
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRGFGGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGFGGGRSWS 505

[Close]
BLAST of Carg04305 vs. NCBI nr
Match: XP_023525778.1 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 951.4 bits (2458), Expect = 1.2e-273
Identity = 497/505 (98.42%), Postives = 499/505 (98.81%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSV EMT+REVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIAILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRGFGGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGFGGGRSWS 505

[Close]
BLAST of Carg04305 vs. NCBI nr
Match: XP_022997755.1 (LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita maxima])

HSP 1 Score: 934.1 bits (2413), Expect = 2.0e-268
Identity = 491/505 (97.23%), Postives = 495/505 (98.02%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDY+ SEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYYGSEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSV EMT+REVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVAEMTEREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGS DLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKG DQ 
Sbjct: 301 NPYKVIIGSSDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGSDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALS HGD SQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSSHGDXSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXXX ARFAK +IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXXNARFAKGLIAILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRGFGGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGFGGGRSWS 505

[Close]
BLAST of Carg04305 vs. NCBI nr
Match: XP_008447604.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Cucumis melo])

HSP 1 Score: 928.3 bits (2398), Expect = 1.1e-266
Identity = 484/505 (95.84%), Postives = 493/505 (97.62%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGSTGY  SVRSSSSK+DY+ SEA KKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSTGYSGSVRSSSSKNDYYGSEASKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SV  MT+REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+I ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIGILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]
BLAST of Carg04305 vs. NCBI nr
Match: XP_022980599.1 (DEAD-box ATP-dependent RNA helicase 20 [Cucurbita maxima])

HSP 1 Score: 925.6 bits (2391), Expect = 7.1e-266
Identity = 483/502 (96.22%), Postives = 494/502 (98.41%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSGFGGSTGY +SV+SSSSKSD++ASEAP+KVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGFGGSTGYSSSVQSSSSKSDHYASEAPRKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SV  MT+REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYVMQEI+KAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIAILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGR 503
           APPPPSGHGGFRDRGRG+GGGR
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGR 502

[Close]
BLAST of Carg04305 vs. TAIR10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 819.3 bits (2115), Expect = 1.3e-237
Identity = 428/505 (84.75%), Postives = 462/505 (91.49%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRT D TSYRDRRSDSGFGG++ YG+S   +SSK D   +E+P+K+DLDGL  FE
Sbjct: 1   MSRYDSRTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ +V  MTD EVEEYRK REITVEG+D+PKPVKSFRDVGFPDYV++E+ KAGFT
Sbjct: 61  KNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVHVNAQP+L+ GDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEA+KFG+SSKIK TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES+
Sbjct: 181 TRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESN 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           +TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS IRPDRQTLYWSATWPKEVEQL++KFLY
Sbjct: 241 NTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGS DLKAN AIRQ VD++SE+QKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQ 
Sbjct: 301 NPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXX   ARFAKE+  IL+EAGQKVSPELA+MGR 
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXVANARFAKELTNILQEAGQKVSPELASMGRS 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
             PPP G GGFRDR    G  R WS
Sbjct: 481 TAPPPPGLGGFRDR----GSRRGWS 501

[Close]
BLAST of Carg04305 vs. TAIR10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 619.8 bits (1597), Expect = 1.5e-177
Identity = 298/432 (68.98%), Postives = 360/432 (83.33%), Query Frame = 0 

Query: 50  KVDLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDY 109
           K +   L HFEKNFY+E+ +V  MT+++V  YR  R+I+VEGRDVPKP+K F+D  FPD 
Sbjct: 116 KQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDN 175

Query: 110 VMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSP 169
           +++ IAK GFTEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L  
Sbjct: 176 ILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ 235

Query: 170 GDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIAT 229
            DGPIVL+LAPTRELAVQIQ+E+ KFG  S +++TCIYGG PKGPQ+RDL++GVEIVIAT
Sbjct: 236 DDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIAT 295

Query: 230 PGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
           PGRLIDM+E  HTNL+RVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+
Sbjct: 296 PGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPR 355

Query: 290 EVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILI 349
           EVE LAR+FL +PYK IIGS DLKAN +I Q ++IV   +KYN+L+ LL+ +MDGS+ILI
Sbjct: 356 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 415

Query: 350 FMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 409
           F++TK+GCDQ TRQLRMDGWPAL+IHGDK+Q+ERD VL+EF+SG+SPIMTATDVAARGLD
Sbjct: 416 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 475

Query: 410 VKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQK 469
           VKD+K V+NYDFP +LEDY+HRI                    A+FA+E++ IL+EAGQ 
Sbjct: 476 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQV 535

Query: 470 VSPELAAMGRGA 482
           V P L+A+ R +
Sbjct: 536 VPPTLSALVRSS 547

[Close]
BLAST of Carg04305 vs. TAIR10
Match: AT3G01540.2 (DEAD box RNA helicase 1)

HSP 1 Score: 424.5 bits (1090), Expect = 9.3e-119
Identity = 223/430 (51.86%), Postives = 296/430 (68.84%), Query Frame = 0 

Query: 79  EEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRD 138
           E Y +R EITV G  VP P+ SF   GFP  +++E+  AGF+ PTPIQ+Q WP+A++GRD
Sbjct: 138 EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRD 197

Query: 139 LIGIAETGSGKTLAYLLPAIVHVNAQPILSPGD-GPIVLVLAPTRELAVQIQQEATKFGA 198
           ++ IA+TGSGKTL YL+P  +H+  Q I +    GP +LVL+PTRELA QIQ+EA KFG 
Sbjct: 198 IVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGR 257

Query: 199 SSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADR 258
           SS+I  TC+YGG PKGPQ+RDL++G +IV+ATPGRL D++E    +LR+++YLVLDEADR
Sbjct: 258 SSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADR 317

Query: 259 MLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPD-LKANH 318
           MLDMGF+PQIRKIV +I   RQTL ++ATWPK V ++A   L NP +V IG+ D L AN 
Sbjct: 318 MLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 377

Query: 319 AIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHG 378
           +I QH+++V+  +K  +L ++L     GS+++IF  TK+ CDQ TR L    + A +IHG
Sbjct: 378 SITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHG 437

Query: 379 DKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXX 438
           DKSQ ERD VL++FRSG++P++ ATDVAARGLDVKD++ V+NYDFP  +EDYVHRI    
Sbjct: 438 DKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTG 497

Query: 439 XXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSP---ELAAMGRGAP------PPPSG 498
                           ++ A ++I ILE A Q+V P   E+A  G G         PPSG
Sbjct: 498 RAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGGGMNKFSRWGPPSG 557

[Close]
BLAST of Carg04305 vs. TAIR10
Match: AT3G06480.1 (DEAD box RNA helicase family protein)

HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-112
Identity = 215/433 (49.65%), Postives = 292/433 (67.44%), Query Frame = 0 

Query: 78  VEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGR 137
           VE YRK+ E+T  G ++P P  +F   G P  +++E+  AGF  PTPIQ+Q WP+AL+ R
Sbjct: 414 VEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSR 473

Query: 138 DLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGA 197
           D++ IA+TGSGKTL YL+PA + +         +GP VL+LAPTRELA QIQ EA +FG 
Sbjct: 474 DIVAIAKTGSGKTLGYLIPAFILLR-HCRNDSRNGPTVLILAPTRELATQIQDEALRFGR 533

Query: 198 SSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADR 257
           SS+I  TC+YGG PKGPQ+++L++G +IV+ATPGRL D++E    + ++V+ LVLDEADR
Sbjct: 534 SSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADR 593

Query: 258 MLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPD-LKANH 317
           MLDMGF+PQIRKIV++I P RQTL ++ATWPKEV ++A   L NP +V IG  D L AN 
Sbjct: 594 MLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANK 653

Query: 318 AIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHG 377
           AI Q+V++V + +K  +L ++L     GS+++IF  TK+ CD   R +    + A+ IHG
Sbjct: 654 AITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHG 713

Query: 378 DKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXX 437
           DK+Q ERDWVL++FRSGKS ++ ATDVAARGLD+KD++ VINYDFP  +EDYVHRI    
Sbjct: 714 DKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTG 773

Query: 438 XXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSP---ELAAMGRGAPPP--PSGHGGF 497
           XXX              ++A ++I +LE A Q+V P   ++A  G G   P       G 
Sbjct: 774 XXXATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMRGGGXXGPGYSQDRRGM 833

Query: 498 RDRGRGFGGGRSW 505
            +R    GGG  W
Sbjct: 834 VNRFDSGGGGTRW 844

[Close]
BLAST of Carg04305 vs. TAIR10
Match: AT5G14610.1 (DEAD box RNA helicase family protein)

HSP 1 Score: 380.2 bits (975), Expect = 2.0e-105
Identity = 203/405 (50.12%), Postives = 278/405 (68.64%), Query Frame = 0 

Query: 105 GFPDYVM-----QEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 164
           GF  Y++     + +  AGF+ P+PIQ+Q WP+A++ RD++ IA+TGSGKTL YL+P  +
Sbjct: 230 GFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 289

Query: 165 HVNAQPILSPGD-GPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRD 224
           H+  Q I +    GP +LVL+PTRELA QIQ EA KFG SSKI   C+YGG PKGPQ+++
Sbjct: 290 HL--QRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKE 349

Query: 225 LQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 284
           +++GV+IV+ATPGRL D++E    +L +V+YLVLDEADRMLDMGF+PQIRKIV+++   R
Sbjct: 350 IERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKR 409

Query: 285 QTLYWSATWPKEVEQLARKFLYNPYKVIIGSPD-LKANHAIRQHVDIVSENQKYNKLVKL 344
           QTL ++ATWPKEV ++A   L NP +V IG+ D L AN +I Q +++++  +K+++L ++
Sbjct: 410 QTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQI 469

Query: 345 LEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPI 404
           L     GS+I+IF  TK+ CDQ  R L    + A +IHGDKSQAERD VL++FRSG++P+
Sbjct: 470 LRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPV 529

Query: 405 MTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAK 464
           + ATDVAARGLDVKD++ V+NYDFP  +EDYVHRI                    A+ A 
Sbjct: 530 LVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHAS 589

Query: 465 EVIAILEEAGQKVSPELAAMG-RGAPPPPSGHGGFRDRGRGFGGG 502
           ++I ILE A QKV P++  M  RG      G   FR  G    GG
Sbjct: 590 DLIKILEGANQKVPPQVREMATRGG----GGMNKFRRWGTPSSGG 627

[Close]
BLAST of Carg04305 vs. Swiss-Prot
Match: sp|Q9C718|RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 2.3e-236
Identity = 428/505 (84.75%), Postives = 462/505 (91.49%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRT D TSYRDRRSDSGFGG++ YG+S   +SSK D   +E+P+K+DLDGL  FE
Sbjct: 1   MSRYDSRTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ +V  MTD EVEEYRK REITVEG+D+PKPVKSFRDVGFPDYV++E+ KAGFT
Sbjct: 61  KNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVHVNAQP+L+ GDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEA+KFG+SSKIK TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES+
Sbjct: 181 TRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESN 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           +TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS IRPDRQTLYWSATWPKEVEQL++KFLY
Sbjct: 241 NTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGS DLKAN AIRQ VD++SE+QKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQ 
Sbjct: 301 NPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXX   ARFAKE+  IL+EAGQKVSPELA+MGR 
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXVANARFAKELTNILQEAGQKVSPELASMGRS 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
             PPP G GGFRDR    G  R WS
Sbjct: 481 TAPPPPGLGGFRDR----GSRRGWS 501

[Close]
BLAST of Carg04305 vs. Swiss-Prot
Match: sp|Q5QMN3|RH20_ORYSJ (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0197200 PE=3 SV=2)

HSP 1 Score: 810.4 bits (2092), Expect = 1.1e-233
Identity = 433/505 (85.74%), Postives = 463/505 (91.68%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSR+D R +DP SYRDRRS+  FGG    G    + +SK+D  A+ A    DLDGLP FE
Sbjct: 1   MSRFDGRAADPGSYRDRRSEGAFGG----GTRAFAPTSKADSAAAAA----DLDGLPRFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ SV  MT+ EVE YR+RREITVEGRDVPKPV+ FRDVGFP+YV+QEI KAGF 
Sbjct: 61  KNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMAL+GRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGF+PQI+KIVSQIRPDRQTLYWSATWPKEVEQLAR FL+
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLF 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           +PYKVIIGS +LKANHAI QHV+I+SE+QKYNKLV LLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 DPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF+SGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAK++I ILEEAGQKVSPELA MGRG
Sbjct: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKDLINILEEAGQKVSPELANMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPP SGH   RDR RG+GGGRSWS
Sbjct: 481 APPPSSGH---RDRYRGYGGGRSWS 494

[Close]
BLAST of Carg04305 vs. Swiss-Prot
Match: sp|Q5N7W4|RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0911100 PE=2 SV=2)

HSP 1 Score: 641.3 bits (1653), Expect = 8.7e-183
Identity = 334/456 (73.25%), Postives = 391/456 (85.75%), Query Frame = 0 

Query: 50  KVDLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDY 109
           K D   L  FEKNFY+E  +V  M+D +V +YR++R+ITVEG DVPKPV+ F++  FPDY
Sbjct: 202 KPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDY 261

Query: 110 VMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSP 169
            MQ IAK+GF EPTPIQSQGWPMALKGRD+IGIA+TGSGKTL+YLLP +VHV AQP L  
Sbjct: 262 CMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 321

Query: 170 GDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIAT 229
           GDGPIVL+LAPTRELAVQIQQE+ KFG+ S+ ++TCIYGG PKGPQ+RDL++GVEIVIAT
Sbjct: 322 GDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 381

Query: 230 PGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
           PGRLIDM+E  HTNLRRVTYLVLDEADRMLDMGF+PQIRKIV+QIRPDRQTLYWSATWP+
Sbjct: 382 PGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPR 441

Query: 290 EVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILI 349
           EVE LAR+FL NPYKVIIGSPDLKANH+I+Q ++++SE++KY +L KLL D+MDGSRILI
Sbjct: 442 EVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILI 501

Query: 350 FMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 409
           F  TKK CD+ TRQLRMDGWPALSIHGDK+QAERD+VL+EF+SGKSPIM ATDVAARGLD
Sbjct: 502 FFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLD 561

Query: 410 VKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQK 469
           VKD+K VIN+DFP +LEDY+HR XXXXXXXXXXXXXXXXXXX A+F++ ++ IL EAGQ 
Sbjct: 562 VKDIKCVINFDFPTTLEDYIHRXXXXXXXXXXXXXXXXXXXXNAKFSRNLVKILREAGQV 621

Query: 470 VSPELAAMGRGAPPPPSGHGGFRDRGRGFGGGRSWS 506
           V+P L +M + A     G G FR RGRG  G RS S
Sbjct: 622 VNPALESMAKSA--SSMGGGNFRSRGRGGFGNRSGS 655

[Close]
BLAST of Carg04305 vs. Swiss-Prot
Match: sp|Q8W4R3|RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2)

HSP 1 Score: 619.8 bits (1597), Expect = 2.7e-176
Identity = 298/432 (68.98%), Postives = 360/432 (83.33%), Query Frame = 0 

Query: 50  KVDLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDY 109
           K +   L HFEKNFY+E+ +V  MT+++V  YR  R+I+VEGRDVPKP+K F+D  FPD 
Sbjct: 116 KQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDN 175

Query: 110 VMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSP 169
           +++ IAK GFTEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L  
Sbjct: 176 ILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ 235

Query: 170 GDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIAT 229
            DGPIVL+LAPTRELAVQIQ+E+ KFG  S +++TCIYGG PKGPQ+RDL++GVEIVIAT
Sbjct: 236 DDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIAT 295

Query: 230 PGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
           PGRLIDM+E  HTNL+RVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+
Sbjct: 296 PGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPR 355

Query: 290 EVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILI 349
           EVE LAR+FL +PYK IIGS DLKAN +I Q ++IV   +KYN+L+ LL+ +MDGS+ILI
Sbjct: 356 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 415

Query: 350 FMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 409
           F++TK+GCDQ TRQLRMDGWPAL+IHGDK+Q+ERD VL+EF+SG+SPIMTATDVAARGLD
Sbjct: 416 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 475

Query: 410 VKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQK 469
           VKD+K V+NYDFP +LEDY+HRI                    A+FA+E++ IL+EAGQ 
Sbjct: 476 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQV 535

Query: 470 VSPELAAMGRGA 482
           V P L+A+ R +
Sbjct: 536 VPPTLSALVRSS 547

[Close]
BLAST of Carg04305 vs. Swiss-Prot
Match: sp|Q5B0J9|DBP2_EMENI (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 1.6e-160
Identity = 285/441 (64.63%), Postives = 349/441 (79.14%), Query Frame = 0 

Query: 52  DLDGLPHFEKNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVM 111
           DLD LP FEK+FY E   V   + REV+E+RK+ E+TV+GRDVP+PV++F + GFP YV+
Sbjct: 93  DLDTLPKFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVL 152

Query: 112 QEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGD 171
            E+   GF +PT IQSQGWPMAL GRD++GIAETGSGKTL+Y LPAIVH+NAQP+L+PGD
Sbjct: 153 SEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGD 212

Query: 172 GPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
           GPIVL+LAPTRELAVQIQ E +KFG SS+I+NTC+YGGVPKGPQ+RDL +GVE+ IATPG
Sbjct: 213 GPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPG 272

Query: 232 RLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEV 291
           RLIDM+E+  TNLRRVTYLVLDEADRMLDMGF+PQIRKI+SQIRPDRQT  WSATWPKEV
Sbjct: 273 RLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEV 332

Query: 292 EQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMD--GSRILI 351
            QLA  FL N  +V IGS DL ANH I Q V+++SE +K ++++K LE IM+  G++ L+
Sbjct: 333 RQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLV 392

Query: 352 FMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 411
           F  TK+  D+ TR LR DGWPALSIHGDK Q ERDWVL+EF++GKSPIM ATDVA+RG+D
Sbjct: 393 FTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGID 452

Query: 412 VKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQK 471
           V+D+ +VINYD+P + EDYVHRI   XXXXXX           A+ A++++ IL EA Q+
Sbjct: 453 VRDITHVINYDYPNNSEDYVHRIGRTXXXXXXGTAITFFTTDNAKQARDLVTILSEAKQQ 512

Query: 472 VSPELAAMGRGAPPPPSGHGG 491
           + P LA M R      SG GG
Sbjct: 513 IDPRLAEMVR-----YSGGGG 528

[Close]
BLAST of Carg04305 vs. TrEMBL
Match: tr|A0A1S3BHT9|A0A1S3BHT9_CUCME (DEAD-box ATP-dependent RNA helicase 20 OS=Cucumis melo OX=3656 GN=LOC103490017 PE=3 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 7.2e-267
Identity = 484/505 (95.84%), Postives = 493/505 (97.62%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGSTGY  SVRSSSSK+DY+ SEA KKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSTGYSGSVRSSSSKNDYYGSEASKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SV  MT+REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+I ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIGILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]
BLAST of Carg04305 vs. TrEMBL
Match: tr|A0A0A0LFT6|A0A0A0LFT6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848820 PE=3 SV=1)

HSP 1 Score: 920.2 bits (2377), Expect = 2.0e-264
Identity = 480/505 (95.05%), Postives = 490/505 (97.03%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGS      VRSSSSKSDY+ SEAPKK+DLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSXXXXXXVRSSSSKSDYYGSEAPKKLDLDGLPHFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SV  MT+REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTC+YGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+I ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELIGILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]
BLAST of Carg04305 vs. TrEMBL
Match: tr|A0A2C9UXY0|A0A2C9UXY0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G027000 PE=3 SV=1)

HSP 1 Score: 881.3 bits (2276), Expect = 1.0e-252
Identity = 456/505 (90.30%), Postives = 481/505 (95.25%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+ DPTSYRDRRSDSGFGG++GY  S RSSS + DY  +++P+K DLDGL  FE
Sbjct: 1   MSRYDSRSGDPTSYRDRRSDSGFGGASGYAGSGRSSSERRDYGRADSPRKSDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ SV  M++REVEEYR+RREITVEGRDVPKPVK FRDVGFPDYV+QEI KAGF 
Sbjct: 61  KNFYVESPSVEAMSEREVEEYRQRREITVEGRDVPKPVKHFRDVGFPDYVLQEITKAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAP
Sbjct: 121 EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEA KFGASS+IKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKVIIGS DLKANHAIRQHVDIV+ENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSADLKANHAIRQHVDIVTENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRI XXXXXXXXXXXXXXXXX  ARFAKE+I ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGXXXXXXXXXXXXXXXXXANARFAKELITILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]
BLAST of Carg04305 vs. TrEMBL
Match: tr|B9SN43|B9SN43_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis OX=3988 GN=RCOM_0312580 PE=3 SV=1)

HSP 1 Score: 878.2 bits (2268), Expect = 8.6e-252
Identity = 455/505 (90.10%), Postives = 484/505 (95.84%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+ DPTSYRDRRSDSGFGG+  YG S RSSS + +Y  + +P+K DLDGL  FE
Sbjct: 1   MSRYDSRSGDPTSYRDRRSDSGFGGALAYGGSGRSSSERREYDRAISPRKSDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ SV  M++REVEEYR+RREITVEGRDVPKPVKSFRDVGFPDYV++E+ +AGF 
Sbjct: 61  KNFYVESPSVAAMSEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVLEEVTRAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAP
Sbjct: 121 EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASS+IKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           NPYKV+IGS DLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVVIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVK+VINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXX ARFAKE+I+ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXNARFAKELISILEEAGQKVSPELAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSG+GGFRDRGRG+GGGRSWS
Sbjct: 481 APPPPSGYGGFRDRGRGYGGGRSWS 505

[Close]
BLAST of Carg04305 vs. TrEMBL
Match: tr|A0A2P6RY10|A0A2P6RY10_ROSCH (Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0142931 PE=3 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 1.1e-251
Identity = 455/505 (90.10%), Postives = 485/505 (96.04%), Query Frame = 0 

Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+ DPTSYRDRRSDSGFGG+TGYG S RSSSS+ DY  +E+P+K+DLDGL  FE
Sbjct: 1   MSRYDSRSGDPTSYRDRRSDSGFGGATGYGGSARSSSSRKDYEGAESPRKLDLDGLTPFE 60

Query: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+  V  MT+REVEEYRKRREITVEGRDVPKP+KSF D+GFP+YVMQEI KAGF 
Sbjct: 61  KNFYVESPEVEGMTEREVEEYRKRREITVEGRDVPKPIKSFCDIGFPEYVMQEITKAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQE+TKFGASSKIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
           +TNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLY
Sbjct: 241 NTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360
           N YKVIIGSPDLKANH+IRQ VDI++ENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NAYKVIIGSPDLKANHSIRQIVDIITENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKEVIAILEEAGQKVSPELAAMGRG 480
           FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXX RFAKE+I++LEEAGQKVSP+LAAMGRG
Sbjct: 421 FPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXXRFAKELISLLEEAGQKVSPDLAAMGRG 480

Query: 481 APPPPSGHGGFRDRGRGFGGGRSWS 506
           APPPPSGHGGFRDRGRG+GGGR WS
Sbjct: 481 APPPPSGHGGFRDRGRGYGGGRPWS 505

The following BLAST results are available for this feature:
BLAST of Carg04305 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949583.12.6e-276100.00DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Cucurbita moschata][more]
XP_023525778.11.2e-27398.42DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022997755.12.0e-26897.23LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita maxi... [more]
XP_008447604.11.1e-26695.84PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Cucumis melo][more]
XP_022980599.17.1e-26696.22DEAD-box ATP-dependent RNA helicase 20 [Cucurbita maxima][more]
BLAST of Carg04305 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55150.11.3e-23784.75DEA(D/H)-box RNA helicase family protein[more]
AT5G63120.21.5e-17768.98P-loop containing nucleoside triphosphate hydrolases superfamily protein[more]
AT3G01540.29.3e-11951.86DEAD box RNA helicase 1[more]
AT3G06480.12.2e-11249.65DEAD box RNA helicase family protein[more]
AT5G14610.12.0e-10550.12DEAD box RNA helicase family protein[more]
BLAST of Carg04305 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C718|RH20_ARATH2.3e-23684.75DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 P... [more]
sp|Q5QMN3|RH20_ORYSJ1.1e-23385.74DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q5N7W4|RH30_ORYSJ8.7e-18373.25DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q8W4R3|RH30_ARATH2.7e-17668.98DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 P... [more]
sp|Q5B0J9|DBP2_EMENI1.6e-16064.63ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38... [more]
BLAST of Carg04305 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BHT9|A0A1S3BHT9_CUCME7.2e-26795.84DEAD-box ATP-dependent RNA helicase 20 OS=Cucumis melo OX=3656 GN=LOC103490017 P... [more]
tr|A0A0A0LFT6|A0A0A0LFT6_CUCSA2.0e-26495.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848820 PE=3 SV=1[more]
tr|A0A2C9UXY0|A0A2C9UXY0_MANES1.0e-25290.30Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G027000 PE=3 SV=... [more]
tr|B9SN43|B9SN43_RICCO8.6e-25290.10Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis OX=3988 GN=RCO... [more]
tr|A0A2P6RY10|A0A2P6RY10_ROSCH1.1e-25190.10Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0142931 PE=3 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR000629RNA-helicase_DEAD-box_CS
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04305-RACarg04305-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 118..321
e-value: 2.9E-68
score: 242.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 130..305
score: 33.075
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 358..439
e-value: 1.7E-33
score: 127.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 330..439
e-value: 6.2E-30
score: 103.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 333..478
score: 23.844
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 318..447
e-value: 2.3587E-42
score: 147.384
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 305..479
e-value: 6.7E-60
score: 203.4
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 62..304
e-value: 1.2E-89
score: 301.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..505
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 24..501
NoneNo IPR availablePANTHERPTHR24031:SF269DEAD-BOX ATP-DEPENDENT RNA HELICASE 30coord: 24..501
NoneNo IPR availableCDDcd00268DEADccoord: 101..305
e-value: 4.39433E-105
score: 314.423
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 123..294
e-value: 1.1E-49
score: 168.5
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 251..259
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 99..127
score: 11.888
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 171..453

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg04305Cla012615Watermelon (97103) v1carwmB0192
Carg04305Csa3G848820Cucumber (Chinese Long) v2carcuB0222
Carg04305MELO3C013051Melon (DHL92) v3.5.1carmeB0204
Carg04305ClCG07G013700Watermelon (Charleston Gray)carwcgB0199
Carg04305CSPI03G41470Wild cucumber (PI 183967)carcpiB0229
Carg04305Cucsa.341230Cucumber (Gy14) v1carcgyB0246
Carg04305CmaCh01G000660Cucurbita maxima (Rimu)carcmaB0278
Carg04305CmaCh14G012660Cucurbita maxima (Rimu)carcmaB0276
Carg04305CmoCh01G000690Cucurbita moschata (Rifu)carcmoB0285
Carg04305CmoCh14G013010Cucurbita moschata (Rifu)carcmoB0283
Carg04305Lsi07G005650Bottle gourd (USVL1VR-Ls)carlsiB182
Carg04305Cp4.1LG02g14170Cucurbita pepo (Zucchini)carcpeB0285
Carg04305Cp4.1LG03g14450Cucurbita pepo (Zucchini)carcpeB0287
Carg04305CsGy3G038920Cucumber (Gy14) v2carcgybB0211
Carg04305MELO3C013051.2Melon (DHL92) v3.6.1carmedB0209
Carg04305CsaV3_3G043910Cucumber (Chinese Long) v3carcucB0226
Carg04305Cla97C07G140520Watermelon (97103) v2carwmbB0205
Carg04305Bhi01G002115Wax gourdcarwgoB0248
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg04305Carg06438Silver-seed gourdcarcarB139
The following block(s) are covering this gene:
GeneOrganismBlock
Carg04305Silver-seed gourdcarcarB102
Carg04305Silver-seed gourdcarcarB233
Carg04305Silver-seed gourdcarcarB238
Carg04305Silver-seed gourdcarcarB240
Carg04305Cucumber (Gy14) v2carcgybB0219
Carg04305Cucumber (Gy14) v1carcgyB0239
Carg04305Cucumber (Gy14) v1carcgyB0248
Carg04305Cucurbita maxima (Rimu)carcmaB0270
Carg04305Cucurbita maxima (Rimu)carcmaB0282
Carg04305Cucurbita maxima (Rimu)carcmaB0283
Carg04305Cucurbita moschata (Rifu)carcmoB0277
Carg04305Cucurbita moschata (Rifu)carcmoB0279
Carg04305Cucurbita moschata (Rifu)carcmoB0289
Carg04305Cucurbita pepo (Zucchini)carcpeB0280
Carg04305Cucurbita pepo (Zucchini)carcpeB0284
Carg04305Cucurbita pepo (Zucchini)carcpeB0290
Carg04305Wild cucumber (PI 183967)carcpiB0237
Carg04305Wild cucumber (PI 183967)carcpiB0224
Carg04305Cucumber (Chinese Long) v2carcuB0216
Carg04305Cucumber (Chinese Long) v2carcuB0217
Carg04305Cucumber (Chinese Long) v2carcuB0230
Carg04305Cucumber (Chinese Long) v3carcucB0223
Carg04305Cucumber (Chinese Long) v3carcucB0234
Carg04305Bottle gourd (USVL1VR-Ls)carlsiB175
Carg04305Bottle gourd (USVL1VR-Ls)carlsiB180
Carg04305Melon (DHL92) v3.5.1carmeB0202
Carg04305Melon (DHL92) v3.5.1carmeB0209
Carg04305Melon (DHL92) v3.6.1carmedB0207
Carg04305Melon (DHL92) v3.6.1carmedB0214
Carg04305Watermelon (Charleston Gray)carwcgB0189
Carg04305Watermelon (Charleston Gray)carwcgB0192
Carg04305Watermelon (Charleston Gray)carwcgB0196
Carg04305Watermelon (97103) v1carwmB0186
Carg04305Watermelon (97103) v1carwmB0190
Carg04305Watermelon (97103) v1carwmB0195
Carg04305Watermelon (97103) v2carwmbB0201
Carg04305Watermelon (97103) v2carwmbB0203
Carg04305Watermelon (97103) v2carwmbB0208
Carg04305Wax gourdcarwgoB0254
Carg04305Wax gourdcarwgoB0255